PKNH_1459800 | ATP-dependent zinc metalloprotease FTSH 1, putative

_IDPredictionOTHERSPmTPCS_Position
PKNH_1459800OTHER0.9999930.0000020.000006
No Results

  • Fasta :-

    >PKNH_1459800 MNSKYENGSFVSTGSDKNCDEENSALLQNKETAGMNERKSKKSNNDNRKYKYYENFFNKK RNKKWNYFMIFFLGICFGFAIWPFFMTIITYKLFYKDNFSSSNFNTSNSSASLKPYGNDR SKKGENGKVSIKDQSQKNSSPHFRPIRFEEIAGIDESKLELLEVVDFIRNREKYQEMGAR MPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSV APSIVFIDEIDAIGGKRSSGSVNGAGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRID TLDSALLRPGRFDRIVYVPLPDVNGRKRILEIYIKKIKSDLKAEDIDKIARLTPGFSGAD LENVVNEATILATRNKKSVVSIGELFEARDKVSMGPERKSLRQSDHQRRITAYHEAGHAI VAYFLQPKTDPIHKATIISRGNALGYVEQIPVDDRHNYFKSQMEAKLAVCMGGRTAEEIV FGKSETSSGASSDISRATEIAYKMVTEWGMSDKLGPLNYKKRMGDGYSSNRLSAQTISTI EVEVKALVEKGKSLSEEILRRHRKELDNLAFALLDKETLSGEEIKKIIDPHNTRDYSEKM PVLSKGTKSDSTSSGTEDDKREKNSTRGEGSSTNEKPSSRSATNDRHGEKQVDEGTPREE LKSSSRDDVFKSEDKRNEQEKHGHATSTDNSKIEILRKNAKNVVKKIKKKYAKDPNVKNK KILKVVNEHKPYDADRKVEGDNSQSKNHPNGLNGLNGQNGPVGEVDKRSYPKGLSPHGDN DNNVVKNMSEVFSKDFAFPYERNGDNENADFLKAKEMTLNNFKEAVDTSHIMNASEMRKF NIFEHNLSKLFLFDIFGS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1459800.fa Sequence name : PKNH_1459800 Sequence length : 858 VALUES OF COMPUTED PARAMETERS Coef20 : 3.233 CoefTot : -0.292 ChDiff : 18 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.647 2.176 0.431 0.938 MesoH : -0.529 0.332 -0.336 0.218 MuHd_075 : 20.117 13.135 6.157 4.568 MuHd_095 : 7.680 5.799 3.238 1.051 MuHd_100 : 11.830 6.919 3.550 1.764 MuHd_105 : 12.035 6.436 3.055 2.046 Hmax_075 : 10.033 3.850 0.115 2.660 Hmax_095 : -1.100 -2.000 -2.906 0.860 Hmax_100 : -1.300 -1.100 -2.603 0.620 Hmax_105 : 0.700 -5.500 -2.435 0.060 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9723 0.0277 DFMC : 0.9516 0.0484
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 858 PKNH_1459800 MNSKYENGSFVSTGSDKNCDEENSALLQNKETAGMNERKSKKSNNDNRKYKYYENFFNKKRNKKWNYFMIFFLGICFGFA 80 IWPFFMTIITYKLFYKDNFSSSNFNTSNSSASLKPYGNDRSKKGENGKVSIKDQSQKNSSPHFRPIRFEEIAGIDESKLE 160 LLEVVDFIRNREKYQEMGARMPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSV 240 APSIVFIDEIDAIGGKRSSGSVNGAGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPL 320 PDVNGRKRILEIYIKKIKSDLKAEDIDKIARLTPGFSGADLENVVNEATILATRNKKSVVSIGELFEARDKVSMGPERKS 400 LRQSDHQRRITAYHEAGHAIVAYFLQPKTDPIHKATIISRGNALGYVEQIPVDDRHNYFKSQMEAKLAVCMGGRTAEEIV 480 FGKSETSSGASSDISRATEIAYKMVTEWGMSDKLGPLNYKKRMGDGYSSNRLSAQTISTIEVEVKALVEKGKSLSEEILR 560 RHRKELDNLAFALLDKETLSGEEIKKIIDPHNTRDYSEKMPVLSKGTKSDSTSSGTEDDKREKNSTRGEGSSTNEKPSSR 640 SATNDRHGEKQVDEGTPREELKSSSRDDVFKSEDKRNEQEKHGHATSTDNSKIEILRKNAKNVVKKIKKKYAKDPNVKNK 720 KILKVVNEHKPYDADRKVEGDNSQSKNHPNGLNGLNGQNGPVGEVDKRSYPKGLSPHGDNDNNVVKNMSEVFSKDFAFPY 800 ERNGDNENADFLKAKEMTLNNFKEAVDTSHIMNASEMRKFNIFEHNLSKLFLFDIFGS 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ........................................................P....................... 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 .......................................................... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PKNH_1459800 4 ---MNSK|YE 0.064 . PKNH_1459800 17 VSTGSDK|NC 0.063 . PKNH_1459800 30 SALLQNK|ET 0.063 . PKNH_1459800 38 TAGMNER|KS 0.088 . PKNH_1459800 39 AGMNERK|SK 0.112 . PKNH_1459800 41 MNERKSK|KS 0.130 . PKNH_1459800 42 NERKSKK|SN 0.208 . PKNH_1459800 48 KSNNDNR|KY 0.122 . PKNH_1459800 49 SNNDNRK|YK 0.102 . PKNH_1459800 51 NDNRKYK|YY 0.255 . PKNH_1459800 59 YENFFNK|KR 0.065 . PKNH_1459800 60 ENFFNKK|RN 0.080 . PKNH_1459800 61 NFFNKKR|NK 0.167 . PKNH_1459800 63 FNKKRNK|KW 0.064 . PKNH_1459800 64 NKKRNKK|WN 0.269 . PKNH_1459800 92 MTIITYK|LF 0.064 . PKNH_1459800 96 TYKLFYK|DN 0.071 . PKNH_1459800 114 NSSASLK|PY 0.079 . PKNH_1459800 120 KPYGNDR|SK 0.129 . PKNH_1459800 122 YGNDRSK|KG 0.068 . PKNH_1459800 123 GNDRSKK|GE 0.382 . PKNH_1459800 128 KKGENGK|VS 0.066 . PKNH_1459800 132 NGKVSIK|DQ 0.080 . PKNH_1459800 137 IKDQSQK|NS 0.073 . PKNH_1459800 144 NSSPHFR|PI 0.176 . PKNH_1459800 147 PHFRPIR|FE 0.283 . PKNH_1459800 158 AGIDESK|LE 0.056 . PKNH_1459800 169 EVVDFIR|NR 0.095 . PKNH_1459800 171 VDFIRNR|EK 0.090 . PKNH_1459800 173 FIRNREK|YQ 0.080 . PKNH_1459800 180 YQEMGAR|MP 0.099 . PKNH_1459800 183 MGARMPK|GV 0.226 . PKNH_1459800 195 GPPGSGK|TM 0.056 . PKNH_1459800 200 GKTMLAR|AV 0.144 . PKNH_1459800 228 YVGQGAK|RI 0.065 . PKNH_1459800 229 VGQGAKR|IR 0.110 . PKNH_1459800 231 QGAKRIR|QL 0.122 . PKNH_1459800 238 QLFAHAR|SV 0.260 . PKNH_1459800 256 IDAIGGK|RS 0.064 . PKNH_1459800 257 DAIGGKR|SS 0.284 . PKNH_1459800 268 VNGAGQR|EH 0.097 . PKNH_1459800 298 VIGATNR|ID 0.065 . PKNH_1459800 308 LDSALLR|PG 0.076 . PKNH_1459800 311 ALLRPGR|FD 0.201 . PKNH_1459800 314 RPGRFDR|IV 0.496 . PKNH_1459800 326 LPDVNGR|KR 0.077 . PKNH_1459800 327 PDVNGRK|RI 0.069 . PKNH_1459800 328 DVNGRKR|IL 0.211 . PKNH_1459800 335 ILEIYIK|KI 0.060 . PKNH_1459800 336 LEIYIKK|IK 0.088 . PKNH_1459800 338 IYIKKIK|SD 0.084 . PKNH_1459800 342 KIKSDLK|AE 0.058 . PKNH_1459800 348 KAEDIDK|IA 0.060 . PKNH_1459800 351 DIDKIAR|LT 0.071 . PKNH_1459800 374 ATILATR|NK 0.069 . PKNH_1459800 376 ILATRNK|KS 0.064 . PKNH_1459800 377 LATRNKK|SV 0.565 *ProP* PKNH_1459800 389 GELFEAR|DK 0.096 . PKNH_1459800 391 LFEARDK|VS 0.056 . PKNH_1459800 398 VSMGPER|KS 0.080 . PKNH_1459800 399 SMGPERK|SL 0.185 . PKNH_1459800 402 PERKSLR|QS 0.140 . PKNH_1459800 408 RQSDHQR|RI 0.131 . PKNH_1459800 409 QSDHQRR|IT 0.172 . PKNH_1459800 428 AYFLQPK|TD 0.059 . PKNH_1459800 434 KTDPIHK|AT 0.066 . PKNH_1459800 440 KATIISR|GN 0.083 . PKNH_1459800 455 QIPVDDR|HN 0.077 . PKNH_1459800 460 DRHNYFK|SQ 0.101 . PKNH_1459800 466 KSQMEAK|LA 0.077 . PKNH_1459800 474 AVCMGGR|TA 0.105 . PKNH_1459800 483 EEIVFGK|SE 0.082 . PKNH_1459800 496 ASSDISR|AT 0.164 . PKNH_1459800 503 ATEIAYK|MV 0.076 . PKNH_1459800 513 EWGMSDK|LG 0.056 . PKNH_1459800 520 LGPLNYK|KR 0.056 . PKNH_1459800 521 GPLNYKK|RM 0.117 . PKNH_1459800 522 PLNYKKR|MG 0.228 . PKNH_1459800 531 DGYSSNR|LS 0.079 . PKNH_1459800 545 TIEVEVK|AL 0.073 . PKNH_1459800 550 VKALVEK|GK 0.075 . PKNH_1459800 552 ALVEKGK|SL 0.112 . PKNH_1459800 560 LSEEILR|RH 0.081 . PKNH_1459800 561 SEEILRR|HR 0.099 . PKNH_1459800 563 EILRRHR|KE 0.129 . PKNH_1459800 564 ILRRHRK|EL 0.351 . PKNH_1459800 576 AFALLDK|ET 0.062 . PKNH_1459800 585 LSGEEIK|KI 0.073 . PKNH_1459800 586 SGEEIKK|II 0.104 . PKNH_1459800 594 IDPHNTR|DY 0.119 . PKNH_1459800 599 TRDYSEK|MP 0.070 . PKNH_1459800 605 KMPVLSK|GT 0.059 . PKNH_1459800 608 VLSKGTK|SD 0.099 . PKNH_1459800 620 SGTEDDK|RE 0.056 . PKNH_1459800 621 GTEDDKR|EK 0.131 . PKNH_1459800 623 EDDKREK|NS 0.066 . PKNH_1459800 627 REKNSTR|GE 0.118 . PKNH_1459800 636 GSSTNEK|PS 0.069 . PKNH_1459800 640 NEKPSSR|SA 0.164 . PKNH_1459800 646 RSATNDR|HG 0.129 . PKNH_1459800 650 NDRHGEK|QV 0.102 . PKNH_1459800 658 VDEGTPR|EE 0.068 . PKNH_1459800 662 TPREELK|SS 0.098 . PKNH_1459800 666 ELKSSSR|DD 0.078 . PKNH_1459800 671 SRDDVFK|SE 0.104 . PKNH_1459800 675 VFKSEDK|RN 0.062 . PKNH_1459800 676 FKSEDKR|NE 0.167 . PKNH_1459800 681 KRNEQEK|HG 0.081 . PKNH_1459800 692 TSTDNSK|IE 0.057 . PKNH_1459800 697 SKIEILR|KN 0.076 . PKNH_1459800 698 KIEILRK|NA 0.085 . PKNH_1459800 701 ILRKNAK|NV 0.088 . PKNH_1459800 705 NAKNVVK|KI 0.066 . PKNH_1459800 706 AKNVVKK|IK 0.141 . PKNH_1459800 708 NVVKKIK|KK 0.073 . PKNH_1459800 709 VVKKIKK|KY 0.083 . PKNH_1459800 710 VKKIKKK|YA 0.131 . PKNH_1459800 713 IKKKYAK|DP 0.079 . PKNH_1459800 718 AKDPNVK|NK 0.054 . PKNH_1459800 720 DPNVKNK|KI 0.100 . PKNH_1459800 721 PNVKNKK|IL 0.103 . PKNH_1459800 724 KNKKILK|VV 0.072 . PKNH_1459800 730 KVVNEHK|PY 0.069 . PKNH_1459800 736 KPYDADR|KV 0.165 . PKNH_1459800 737 PYDADRK|VE 0.073 . PKNH_1459800 746 GDNSQSK|NH 0.072 . PKNH_1459800 767 PVGEVDK|RS 0.064 . PKNH_1459800 768 VGEVDKR|SY 0.274 . PKNH_1459800 772 DKRSYPK|GL 0.091 . PKNH_1459800 786 NDNNVVK|NM 0.073 . PKNH_1459800 794 MSEVFSK|DF 0.065 . PKNH_1459800 802 FAFPYER|NG 0.073 . PKNH_1459800 813 ENADFLK|AK 0.074 . PKNH_1459800 815 ADFLKAK|EM 0.066 . PKNH_1459800 823 MTLNNFK|EA 0.059 . PKNH_1459800 838 MNASEMR|KF 0.113 . PKNH_1459800 839 NASEMRK|FN 0.099 . PKNH_1459800 849 FEHNLSK|LF 0.058 . ____________________________^_________________

  • Fasta :-

    >PKNH_1459800 ATGAATTCCAAGTATGAAAATGGAAGCTTCGTGTCAACAGGCTCAGACAAAAACTGCGAT GAGGAAAATTCAGCATTGCTACAGAACAAGGAGACGGCAGGAATGAACGAGAGGAAATCA AAAAAATCAAACAACGATAATAGGAAGTACAAATATTACGAAAACTTTTTTAACAAAAAG AGAAATAAAAAATGGAATTATTTTATGATATTTTTTCTGGGAATATGTTTTGGCTTTGCC ATTTGGCCATTCTTCATGACCATAATAACGTATAAATTATTTTACAAAGACAATTTTAGC AGTTCTAATTTTAACACCAGCAACAGTTCAGCATCATTAAAACCCTATGGAAATGATAGA AGTAAAAAAGGTGAAAATGGAAAGGTATCCATAAAAGATCAATCCCAGAAAAATTCCTCT CCCCATTTTAGGCCTATCCGTTTTGAAGAAATAGCCGGAATTGATGAATCAAAGTTGGAA CTTCTGGAAGTTGTTGACTTTATAAGGAATAGAGAAAAGTACCAAGAAATGGGTGCAAGA ATGCCTAAGGGAGTTCTTCTGGTTGGTCCTCCAGGGTCAGGAAAAACCATGCTAGCTAGG GCAGTAGCCACAGAAGCAAATGTTCCATATATTTATACATCCGGCCCAGAATTTATTGAG ATATATGTTGGCCAGGGGGCAAAAAGAATAAGACAGTTATTTGCACACGCAAGGTCAGTT GCTCCATCCATCGTTTTTATTGACGAAATTGACGCCATAGGAGGGAAGAGAAGTTCCGGT TCTGTGAATGGCGCTGGTCAGAGAGAACATGATCAAACGCTTAACCAGTTGTTAGTGGAA ATGGATGGGTTCAGCAACACTGTCCATATTATGGTTATAGGTGCAACGAACCGAATTGAT ACACTGGATAGTGCCCTGCTCCGACCTGGGAGATTCGATCGAATCGTTTATGTCCCCCTA CCTGATGTTAATGGAAGGAAAAGGATCCTAGAAATTTATATCAAGAAAATTAAAAGCGAT TTAAAAGCAGAAGATATTGATAAAATAGCTAGATTGACTCCTGGGTTTTCAGGAGCTGAC TTAGAAAATGTAGTAAATGAAGCAACTATCCTTGCAACTAGAAATAAAAAAAGTGTAGTC TCCATTGGGGAGCTTTTCGAAGCTAGAGATAAAGTTTCCATGGGTCCAGAGAGAAAATCT CTAAGACAATCCGACCATCAGCGAAGAATTACTGCTTATCACGAAGCGGGACATGCAATC GTGGCGTACTTTCTTCAACCTAAAACGGATCCAATACATAAGGCTACGATTATCTCAAGA GGCAATGCCCTTGGGTACGTAGAACAAATACCAGTGGATGATAGGCACAACTATTTTAAA AGCCAAATGGAAGCAAAATTGGCCGTCTGTATGGGTGGAAGAACCGCAGAAGAAATCGTT TTCGGAAAATCTGAAACGAGTAGTGGTGCTTCTAGTGATATTTCTAGAGCTACCGAAATT GCTTACAAAATGGTAACCGAATGGGGAATGTCAGATAAGCTTGGCCCACTGAATTATAAG AAAAGAATGGGAGATGGATACTCATCAAACAGATTATCAGCTCAAACTATTTCCACTATT GAAGTGGAGGTGAAGGCTCTTGTGGAGAAAGGGAAAAGCTTATCCGAAGAAATACTCAGA AGGCATAGGAAGGAATTGGACAATTTAGCCTTTGCACTGCTCGATAAAGAAACCTTATCT GGAGAGGAAATAAAGAAAATTATTGACCCACACAACACCAGGGATTACTCCGAAAAAATG CCTGTTCTAAGTAAGGGCACCAAATCGGATAGCACTTCAAGCGGAACAGAAGATGACAAA AGAGAAAAAAATTCCACGCGCGGGGAAGGAAGCAGCACAAATGAAAAACCGTCGAGTCGA AGCGCAACAAATGATCGACATGGAGAAAAGCAAGTCGATGAAGGAACCCCTCGCGAAGAA CTCAAAAGTTCTAGCAGGGACGATGTATTCAAGAGCGAGGACAAACGAAATGAACAAGAG AAGCATGGACATGCAACCTCTACAGACAATAGCAAAATCGAAATTTTAAGGAAAAACGCC AAAAATGTAGTAAAAAAGATAAAGAAGAAATACGCCAAAGATCCCAATGTTAAGAATAAG AAAATTCTGAAAGTTGTGAATGAGCATAAACCGTACGACGCAGATAGGAAGGTGGAAGGG GACAATTCCCAAAGTAAAAACCACCCAAATGGATTAAATGGCTTAAATGGCCAAAATGGC CCAGTGGGAGAAGTGGATAAACGCAGCTACCCGAAGGGACTCTCGCCTCACGGCGACAAT GACAACAACGTGGTAAAAAATATGAGCGAAGTGTTTAGCAAGGATTTTGCTTTCCCCTAT GAACGAAATGGCGATAACGAAAATGCCGATTTTTTAAAAGCGAAAGAAATGACCCTGAAC AATTTCAAGGAAGCTGTAGACACCTCGCACATAATGAACGCAAGTGAAATGAGAAAATTC AACATTTTTGAGCACAACTTGAGTAAGCTCTTCCTCTTTGATATTTTTGGCAGCTAG
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  • Fasta :-

    MNSKYENGSFVSTGSDKNCDEENSALLQNKETAGMNERKSKKSNNDNRKYKYYENFFNKK RNKKWNYFMIFFLGICFGFAIWPFFMTIITYKLFYKDNFSSSNFNTSNSSASLKPYGNDR SKKGENGKVSIKDQSQKNSSPHFRPIRFEEIAGIDESKLELLEVVDFIRNREKYQEMGAR MPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSV APSIVFIDEIDAIGGKRSSGSVNGAGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRID TLDSALLRPGRFDRIVYVPLPDVNGRKRILEIYIKKIKSDLKAEDIDKIARLTPGFSGAD LENVVNEATILATRNKKSVVSIGELFEARDKVSMGPERKSLRQSDHQRRITAYHEAGHAI VAYFLQPKTDPIHKATIISRGNALGYVEQIPVDDRHNYFKSQMEAKLAVCMGGRTAEEIV FGKSETSSGASSDISRATEIAYKMVTEWGMSDKLGPLNYKKRMGDGYSSNRLSAQTISTI EVEVKALVEKGKSLSEEILRRHRKELDNLAFALLDKETLSGEEIKKIIDPHNTRDYSEKM PVLSKGTKSDSTSSGTEDDKREKNSTRGEGSSTNEKPSSRSATNDRHGEKQVDEGTPREE LKSSSRDDVFKSEDKRNEQEKHGHATSTDNSKIEILRKNAKNVVKKIKKKYAKDPNVKNK KILKVVNEHKPYDADRKVEGDNSQSKNHPNGLNGLNGQNGPVGEVDKRSYPKGLSPHGDN DNNVVKNMSEVFSKDFAFPYERNGDNENADFLKAKEMTLNNFKEAVDTSHIMNASEMRKF NIFEHNLSKLFLFDIFGS

  • title: ATP binding site
  • coordinates: P190,P191,G192,S193,G194,K195,T196,M197,D248,N297
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_1459800130 SNGKVSIKDQ0.998unspPKNH_1459800130 SNGKVSIKDQ0.998unspPKNH_1459800130 SNGKVSIKDQ0.998unspPKNH_1459800135 SIKDQSQKNS0.995unspPKNH_1459800381 SKSVVSIGEL0.994unspPKNH_1459800400 SPERKSLRQS0.997unspPKNH_1459800580 SKETLSGEEI0.997unspPKNH_1459800597 STRDYSEKMP0.995unspPKNH_1459800611 STKSDSTSSG0.991unspPKNH_1459800614 SDSTSSGTED0.996unspPKNH_1459800638 SNEKPSSRSA0.995unspPKNH_1459800656 TVDEGTPREE0.995unspPKNH_1459800663 SEELKSSSRD0.994unspPKNH_1459800664 SELKSSSRDD0.997unspPKNH_1459800691 SSTDNSKIEI0.993unspPKNH_145980040 SNERKSKKSN0.997unspPKNH_145980043 SKSKKSNNDN0.997unsp

PK12_3900w      PKH_145770      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India