PKNH_1460100 | 3-hydroxyisobutyryl-CoA hydrolase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003860      

  • Computed_GO_Functions:  3-hydroxyisobutyryl-CoA hydrolase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_1460100OTHER0.9655070.0002290.034265
No Results

  • Fasta :-

    >PKNH_1460100 MQKLGSRLHLVEANRARRRFHNYVVNPERGGSLFCVPHFCTSHFSIKKGNPQREFKGASL CERRQSNSFFSKARNNCSVDGKGRNEIFFERMEKKNSKTFHLTKQSVSSDKATTLDSAKG GQVNEAEKEKNGKTSEEEAFLKNGNEDKMASRKGEKQNSDPHASVIDLELSELWSKKTLI LNFKNSVFEIILNRPEKLNAINKDMINGLLNIVKSLNNDDRCHIIVIKSSNTACFCSGSD VKDIVQNKEKGMQHLKQLYMYIHYLSKMKKPILCIWNGYAMGGGLGISMYAKFRIINKNA IFAMPENKIGFFPDITCCYFFKKYFGRNIGLHLGLTSLRLNEVDLVNFKICSNYVEDVDE LLNHIYKIGKTNQDEFDAELASVLDKYPPKVTTDTKPVLTEKLISNIDKYYSSATSLDDL VSKLKKDQDDNPFCKETLDAINQNCYSSCNLWFEYFLYSYDKPLEEVLDNDFKITQHFLY HTDTFEKGVTELLVKKNKSFKWSSVRDYGDLHVGPSVEDILTNSGVLSIRGEFT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1460100.fa Sequence name : PKNH_1460100 Sequence length : 534 VALUES OF COMPUTED PARAMETERS Coef20 : 4.683 CoefTot : -2.360 ChDiff : 9 ZoneTo : 53 KR : 10 DE : 2 CleavSite : 31 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.424 1.106 0.224 0.633 MesoH : -0.273 0.410 -0.301 0.276 MuHd_075 : 33.173 22.589 13.054 6.468 MuHd_095 : 38.030 22.973 9.968 9.027 MuHd_100 : 43.771 21.546 10.759 10.009 MuHd_105 : 44.140 19.266 10.366 9.498 Hmax_075 : 7.233 4.900 1.526 2.578 Hmax_095 : 2.012 4.200 -1.704 3.040 Hmax_100 : 9.600 4.200 1.005 4.400 Hmax_105 : 1.400 8.600 -1.904 5.343 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1197 0.8803 DFMC : 0.1534 0.8466 This protein is probably imported in mitochondria. f(Ser) = 0.0755 f(Arg) = 0.1321 CMi = 0.29608 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 534 PKNH_1460100 MQKLGSRLHLVEANRARRRFHNYVVNPERGGSLFCVPHFCTSHFSIKKGNPQREFKGASLCERRQSNSFFSKARNNCSVD 80 GKGRNEIFFERMEKKNSKTFHLTKQSVSSDKATTLDSAKGGQVNEAEKEKNGKTSEEEAFLKNGNEDKMASRKGEKQNSD 160 PHASVIDLELSELWSKKTLILNFKNSVFEIILNRPEKLNAINKDMINGLLNIVKSLNNDDRCHIIVIKSSNTACFCSGSD 240 VKDIVQNKEKGMQHLKQLYMYIHYLSKMKKPILCIWNGYAMGGGLGISMYAKFRIINKNAIFAMPENKIGFFPDITCCYF 320 FKKYFGRNIGLHLGLTSLRLNEVDLVNFKICSNYVEDVDELLNHIYKIGKTNQDEFDAELASVLDKYPPKVTTDTKPVLT 400 EKLISNIDKYYSSATSLDDLVSKLKKDQDDNPFCKETLDAINQNCYSSCNLWFEYFLYSYDKPLEEVLDNDFKITQHFLY 480 HTDTFEKGVTELLVKKNKSFKWSSVRDYGDLHVGPSVEDILTNSGVLSIRGEFT 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ...................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1460100 3 ----MQK|LG 0.058 . PKNH_1460100 7 MQKLGSR|LH 0.063 . PKNH_1460100 15 HLVEANR|AR 0.072 . PKNH_1460100 17 VEANRAR|RR 0.083 . PKNH_1460100 18 EANRARR|RF 0.400 . PKNH_1460100 19 ANRARRR|FH 0.164 . PKNH_1460100 29 YVVNPER|GG 0.075 . PKNH_1460100 47 TSHFSIK|KG 0.076 . PKNH_1460100 48 SHFSIKK|GN 0.100 . PKNH_1460100 53 KKGNPQR|EF 0.090 . PKNH_1460100 56 NPQREFK|GA 0.260 . PKNH_1460100 63 GASLCER|RQ 0.113 . PKNH_1460100 64 ASLCERR|QS 0.101 . PKNH_1460100 72 SNSFFSK|AR 0.071 . PKNH_1460100 74 SFFSKAR|NN 0.098 . PKNH_1460100 82 NCSVDGK|GR 0.079 . PKNH_1460100 84 SVDGKGR|NE 0.093 . PKNH_1460100 91 NEIFFER|ME 0.082 . PKNH_1460100 94 FFERMEK|KN 0.121 . PKNH_1460100 95 FERMEKK|NS 0.103 . PKNH_1460100 98 MEKKNSK|TF 0.063 . PKNH_1460100 104 KTFHLTK|QS 0.062 . PKNH_1460100 111 QSVSSDK|AT 0.060 . PKNH_1460100 119 TTLDSAK|GG 0.067 . PKNH_1460100 128 QVNEAEK|EK 0.061 . PKNH_1460100 130 NEAEKEK|NG 0.067 . PKNH_1460100 133 EKEKNGK|TS 0.067 . PKNH_1460100 142 EEEAFLK|NG 0.058 . PKNH_1460100 148 KNGNEDK|MA 0.087 . PKNH_1460100 152 EDKMASR|KG 0.089 . PKNH_1460100 153 DKMASRK|GE 0.093 . PKNH_1460100 156 ASRKGEK|QN 0.069 . PKNH_1460100 176 LSELWSK|KT 0.054 . PKNH_1460100 177 SELWSKK|TL 0.098 . PKNH_1460100 184 TLILNFK|NS 0.056 . PKNH_1460100 194 FEIILNR|PE 0.061 . PKNH_1460100 197 ILNRPEK|LN 0.141 . PKNH_1460100 203 KLNAINK|DM 0.082 . PKNH_1460100 214 GLLNIVK|SL 0.075 . PKNH_1460100 221 SLNNDDR|CH 0.118 . PKNH_1460100 228 CHIIVIK|SS 0.079 . PKNH_1460100 242 CSGSDVK|DI 0.070 . PKNH_1460100 248 KDIVQNK|EK 0.071 . PKNH_1460100 250 IVQNKEK|GM 0.065 . PKNH_1460100 256 KGMQHLK|QL 0.072 . PKNH_1460100 267 YIHYLSK|MK 0.067 . PKNH_1460100 269 HYLSKMK|KP 0.057 . PKNH_1460100 270 YLSKMKK|PI 0.142 . PKNH_1460100 292 GISMYAK|FR 0.077 . PKNH_1460100 294 SMYAKFR|II 0.099 . PKNH_1460100 298 KFRIINK|NA 0.068 . PKNH_1460100 308 FAMPENK|IG 0.056 . PKNH_1460100 322 TCCYFFK|KY 0.068 . PKNH_1460100 323 CCYFFKK|YF 0.147 . PKNH_1460100 327 FKKYFGR|NI 0.130 . PKNH_1460100 339 LGLTSLR|LN 0.079 . PKNH_1460100 349 VDLVNFK|IC 0.059 . PKNH_1460100 367 LLNHIYK|IG 0.073 . PKNH_1460100 370 HIYKIGK|TN 0.068 . PKNH_1460100 386 LASVLDK|YP 0.076 . PKNH_1460100 390 LDKYPPK|VT 0.068 . PKNH_1460100 396 KVTTDTK|PV 0.067 . PKNH_1460100 402 KPVLTEK|LI 0.070 . PKNH_1460100 409 LISNIDK|YY 0.086 . PKNH_1460100 423 LDDLVSK|LK 0.062 . PKNH_1460100 425 DLVSKLK|KD 0.059 . PKNH_1460100 426 LVSKLKK|DQ 0.182 . PKNH_1460100 435 DDNPFCK|ET 0.077 . PKNH_1460100 462 FLYSYDK|PL 0.074 . PKNH_1460100 473 VLDNDFK|IT 0.063 . PKNH_1460100 487 HTDTFEK|GV 0.076 . PKNH_1460100 495 VTELLVK|KN 0.053 . PKNH_1460100 496 TELLVKK|NK 0.088 . PKNH_1460100 498 LLVKKNK|SF 0.078 . PKNH_1460100 501 KKNKSFK|WS 0.077 . PKNH_1460100 506 FKWSSVR|DY 0.139 . PKNH_1460100 530 SGVLSIR|GE 0.092 . ____________________________^_________________

  • Fasta :-

    >PKNH_1460100 ATGCAAAAATTAGGCTCGCGACTCCATCTGGTAGAAGCCAATCGTGCAAGACGGAGGTTT CACAATTATGTAGTCAATCCAGAGAGGGGTGGCTCCCTTTTCTGTGTTCCCCATTTTTGT ACAAGCCATTTTTCTATAAAAAAAGGCAACCCACAGAGGGAGTTCAAAGGTGCGTCCCTC TGCGAAAGGAGACAAAGCAACAGCTTCTTTAGCAAAGCGAGAAACAACTGTTCCGTCGAT GGAAAAGGAAGAAATGAAATATTTTTTGAAAGAATGGAAAAAAAAAATAGCAAAACTTTT CATTTGACGAAACAAAGTGTGTCCAGTGATAAAGCAACCACACTCGATTCTGCAAAAGGG GGACAAGTTAACGAAGCGGAGAAGGAGAAAAATGGGAAAACTTCGGAAGAAGAGGCATTC CTCAAGAATGGGAATGAAGACAAAATGGCCAGTCGAAAGGGGGAAAAACAAAATAGTGAC CCGCACGCCTCAGTCATAGACCTAGAACTGTCCGAACTGTGGTCCAAAAAAACTCTCATT CTAAATTTCAAAAATAGCGTATTCGAAATAATTTTAAACAGACCAGAAAAGCTGAACGCA ATTAACAAAGACATGATTAATGGTTTGTTAAACATTGTGAAAAGCTTAAACAACGATGAT AGGTGTCACATTATTGTGATAAAAAGTAGCAACACGGCGTGCTTCTGCTCAGGTTCTGAT GTCAAGGACATTGTCCAAAATAAAGAAAAAGGGATGCAACATTTGAAGCAACTGTACATG TACATTCATTATTTATCTAAAATGAAAAAACCCATCTTGTGCATATGGAATGGTTATGCT ATGGGAGGAGGGTTAGGGATTTCTATGTATGCAAAATTTAGGATAATAAATAAGAACGCC ATATTTGCCATGCCGGAAAATAAAATTGGCTTCTTCCCCGATATCACCTGCTGTTACTTT TTTAAAAAATATTTTGGAAGAAACATTGGTCTCCATCTAGGGTTGACTTCCCTACGGTTA AACGAAGTCGATTTAGTCAACTTTAAAATTTGTAGCAACTATGTGGAAGATGTGGATGAA CTGCTGAACCATATTTACAAAATTGGGAAAACAAACCAGGATGAGTTCGATGCGGAACTT GCCAGCGTCTTAGATAAGTACCCGCCCAAAGTCACTACAGACACGAAACCGGTACTTACT GAAAAATTAATTAGCAACATCGACAAGTACTACAGTTCCGCTACTAGTCTAGACGATCTT GTTAGCAAGTTGAAAAAGGACCAGGATGATAACCCCTTTTGCAAAGAGACCCTTGACGCT ATAAACCAGAACTGCTACTCCAGTTGCAATTTATGGTTTGAATATTTCCTTTACAGTTAT GATAAACCCTTGGAGGAGGTGCTAGACAACGATTTTAAAATTACACAGCATTTCTTGTAT CACACAGATACCTTCGAGAAGGGCGTAACTGAGCTCCTTGTGAAGAAAAATAAATCTTTC AAGTGGAGCTCCGTGCGGGATTATGGGGATTTGCATGTGGGCCCAAGCGTTGAAGATATT CTAACAAATAGCGGGGTGTTGTCTATCCGGGGAGAATTCACATGA
  • Download Fasta

  • Fasta :-

    MQKLGSRLHLVEANRARRRFHNYVVNPERGGSLFCVPHFCTSHFSIKKGNPQREFKGASL CERRQSNSFFSKARNNCSVDGKGRNEIFFERMEKKNSKTFHLTKQSVSSDKATTLDSAKG GQVNEAEKEKNGKTSEEEAFLKNGNEDKMASRKGEKQNSDPHASVIDLELSELWSKKTLI LNFKNSVFEIILNRPEKLNAINKDMINGLLNIVKSLNNDDRCHIIVIKSSNTACFCSGSD VKDIVQNKEKGMQHLKQLYMYIHYLSKMKKPILCIWNGYAMGGGLGISMYAKFRIINKNA IFAMPENKIGFFPDITCCYFFKKYFGRNIGLHLGLTSLRLNEVDLVNFKICSNYVEDVDE LLNHIYKIGKTNQDEFDAELASVLDKYPPKVTTDTKPVLTEKLISNIDKYYSSATSLDDL VSKLKKDQDDNPFCKETLDAINQNCYSSCNLWFEYFLYSYDKPLEEVLDNDFKITQHFLY HTDTFEKGVTELLVKKNKSFKWSSVRDYGDLHVGPSVEDILTNSGVLSIRGEFT

  • title: substrate binding site
  • coordinates: L198,A200,T232,S237,G238,S239,D240,V241,Y279,M281,G282,G283,P305,E306,I309
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_1460100151 SDKMASRKGE0.992unspPKNH_1460100151 SDKMASRKGE0.992unspPKNH_1460100151 SDKMASRKGE0.992unspPKNH_1460100164 SDPHASVIDL0.992unspPKNH_1460100416 SSSATSLDDL0.995unspPKNH_1460100499 SKKNKSFKWS0.991unspPKNH_1460100516 SHVGPSVEDI0.993unspPKNH_1460100109 SQSVSSDKAT0.997unspPKNH_1460100135 SNGKTSEEEA0.998unsp

PK12_3950w      PKH_145800      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India