PVX_000800 | tRNA N6-adenosine threonylcarbamoyltransferase, putative

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_IDPredictionOTHERSPmTPCS_Position
PVX_000800OTHER0.7920690.1503880.057543
No Results

  • Fasta :-

    >PVX_000800 MIMKNAIKNLATCLSCVLSLLRYVHYAYRIDNITIKKTQFSDALERTVHKINKRVQKDRA VYYDVCKYKKIPKILTERNKPKNNQKVKYIVGIENTCDDTCICVLDSNLNIVKNVIISHF KVVHKYEGVYPFFISSINQLFLKPYVEKALEGIDQSRISCFAFSACPGIAKSMEAAKNYI GERKKQNESIRVSPINHVFAHVLSPLFFHVYNDENTYTNSGQYKGGKSDQSRNERSIDMH ISEEVRKDKAQMEKVKDILQILNSNDVTKRKMALLSEEEFLNCGDYVLRGEMGSEAVKNM DGEAPQDVNKEAPQNVSYKRENTSSAHKPQYSGEAPQGSRLTDGYLCALVSGGSTQIFKV QRNKKNEINLSKLAQTVDISIGDIIDKIARLLGLPVGLGGGPFLERKSAEFVRRMKEQRL SGEACADPFQPFPVPFCANNRVDFSFSGLYNHLRKIIEESKKGESFEREKDRYAYFSQKN IFNHLLTQINKIMYFSELHFNIKKICLVGGVGCNQFLISKLRCMARGRNQLQVRLNEFKR LRKRLNKRLKKISEKKFLHSKVSKEVLKGEIDFSASLAWDVYLKLLLKRKTERDILSALE CFNFEDFSKLKEGGHFLLEGHSASPESEAPWSVYKTPPNLSRDNAAMICFSAFLNLHNKS DLHEDASQVEIKPTVKTRVENNFLLFSDMIVFDVFLRKFGAQGG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_000800.fa Sequence name : PVX_000800 Sequence length : 704 VALUES OF COMPUTED PARAMETERS Coef20 : 4.733 CoefTot : 0.323 ChDiff : 30 ZoneTo : 30 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.129 1.441 0.168 0.586 MesoH : -0.531 0.481 -0.333 0.244 MuHd_075 : 25.781 18.018 8.894 5.464 MuHd_095 : 31.887 29.238 9.089 9.284 MuHd_100 : 33.558 30.293 11.119 9.217 MuHd_105 : 38.007 34.381 12.100 10.663 Hmax_075 : 17.000 16.800 4.899 5.203 Hmax_095 : 19.425 24.762 5.049 7.402 Hmax_100 : 14.900 28.100 5.808 7.520 Hmax_105 : 17.200 26.800 6.820 7.254 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0150 0.9850 DFMC : 0.0854 0.9146 This protein is probably imported in mitochondria. f(Ser) = 0.0667 f(Arg) = 0.0667 CMi = 0.40816 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 704 PVX_000800 MIMKNAIKNLATCLSCVLSLLRYVHYAYRIDNITIKKTQFSDALERTVHKINKRVQKDRAVYYDVCKYKKIPKILTERNK 80 PKNNQKVKYIVGIENTCDDTCICVLDSNLNIVKNVIISHFKVVHKYEGVYPFFISSINQLFLKPYVEKALEGIDQSRISC 160 FAFSACPGIAKSMEAAKNYIGERKKQNESIRVSPINHVFAHVLSPLFFHVYNDENTYTNSGQYKGGKSDQSRNERSIDMH 240 ISEEVRKDKAQMEKVKDILQILNSNDVTKRKMALLSEEEFLNCGDYVLRGEMGSEAVKNMDGEAPQDVNKEAPQNVSYKR 320 ENTSSAHKPQYSGEAPQGSRLTDGYLCALVSGGSTQIFKVQRNKKNEINLSKLAQTVDISIGDIIDKIARLLGLPVGLGG 400 GPFLERKSAEFVRRMKEQRLSGEACADPFQPFPVPFCANNRVDFSFSGLYNHLRKIIEESKKGESFEREKDRYAYFSQKN 480 IFNHLLTQINKIMYFSELHFNIKKICLVGGVGCNQFLISKLRCMARGRNQLQVRLNEFKRLRKRLNKRLKKISEKKFLHS 560 KVSKEVLKGEIDFSASLAWDVYLKLLLKRKTERDILSALECFNFEDFSKLKEGGHFLLEGHSASPESEAPWSVYKTPPNL 640 SRDNAAMICFSAFLNLHNKSDLHEDASQVEIKPTVKTRVENNFLLFSDMIVFDVFLRKFGAQGG 720 ................................................................................ 80 ................................................................................ 160 ..........................................................................P..... 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PVX_000800 4 ---MIMK|NA 0.076 . PVX_000800 8 IMKNAIK|NL 0.065 . PVX_000800 22 CVLSLLR|YV 0.089 . PVX_000800 29 YVHYAYR|ID 0.076 . PVX_000800 36 IDNITIK|KT 0.065 . PVX_000800 37 DNITIKK|TQ 0.071 . PVX_000800 46 FSDALER|TV 0.117 . PVX_000800 50 LERTVHK|IN 0.068 . PVX_000800 53 TVHKINK|RV 0.089 . PVX_000800 54 VHKINKR|VQ 0.107 . PVX_000800 57 INKRVQK|DR 0.183 . PVX_000800 59 KRVQKDR|AV 0.157 . PVX_000800 67 VYYDVCK|YK 0.058 . PVX_000800 69 YDVCKYK|KI 0.080 . PVX_000800 70 DVCKYKK|IP 0.071 . PVX_000800 73 KYKKIPK|IL 0.061 . PVX_000800 78 PKILTER|NK 0.070 . PVX_000800 80 ILTERNK|PK 0.060 . PVX_000800 82 TERNKPK|NN 0.087 . PVX_000800 86 KPKNNQK|VK 0.067 . PVX_000800 88 KNNQKVK|YI 0.127 . PVX_000800 113 SNLNIVK|NV 0.071 . PVX_000800 121 VIISHFK|VV 0.085 . PVX_000800 125 HFKVVHK|YE 0.077 . PVX_000800 143 INQLFLK|PY 0.060 . PVX_000800 148 LKPYVEK|AL 0.076 . PVX_000800 157 EGIDQSR|IS 0.086 . PVX_000800 171 ACPGIAK|SM 0.086 . PVX_000800 177 KSMEAAK|NY 0.072 . PVX_000800 183 KNYIGER|KK 0.071 . PVX_000800 184 NYIGERK|KQ 0.079 . PVX_000800 185 YIGERKK|QN 0.114 . PVX_000800 191 KQNESIR|VS 0.088 . PVX_000800 224 TNSGQYK|GG 0.077 . PVX_000800 227 GQYKGGK|SD 0.071 . PVX_000800 232 GKSDQSR|NE 0.123 . PVX_000800 235 DQSRNER|SI 0.587 *ProP* PVX_000800 246 HISEEVR|KD 0.094 . PVX_000800 247 ISEEVRK|DK 0.127 . PVX_000800 249 EEVRKDK|AQ 0.165 . PVX_000800 254 DKAQMEK|VK 0.062 . PVX_000800 256 AQMEKVK|DI 0.105 . PVX_000800 269 NSNDVTK|RK 0.074 . PVX_000800 270 SNDVTKR|KM 0.109 . PVX_000800 271 NDVTKRK|MA 0.106 . PVX_000800 289 CGDYVLR|GE 0.087 . PVX_000800 298 MGSEAVK|NM 0.067 . PVX_000800 310 APQDVNK|EA 0.077 . PVX_000800 319 PQNVSYK|RE 0.068 . PVX_000800 320 QNVSYKR|EN 0.158 . PVX_000800 328 NTSSAHK|PQ 0.067 . PVX_000800 340 EAPQGSR|LT 0.083 . PVX_000800 359 GSTQIFK|VQ 0.057 . PVX_000800 362 QIFKVQR|NK 0.088 . PVX_000800 364 FKVQRNK|KN 0.066 . PVX_000800 365 KVQRNKK|NE 0.179 . PVX_000800 372 NEINLSK|LA 0.068 . PVX_000800 387 IGDIIDK|IA 0.060 . PVX_000800 390 IIDKIAR|LL 0.082 . PVX_000800 406 GGPFLER|KS 0.075 . PVX_000800 407 GPFLERK|SA 0.203 . PVX_000800 413 KSAEFVR|RM 0.107 . PVX_000800 414 SAEFVRR|MK 0.247 . PVX_000800 416 EFVRRMK|EQ 0.095 . PVX_000800 419 RRMKEQR|LS 0.140 . PVX_000800 441 PFCANNR|VD 0.065 . PVX_000800 454 GLYNHLR|KI 0.091 . PVX_000800 455 LYNHLRK|II 0.115 . PVX_000800 461 KIIEESK|KG 0.060 . PVX_000800 462 IIEESKK|GE 0.098 . PVX_000800 468 KGESFER|EK 0.084 . PVX_000800 470 ESFEREK|DR 0.069 . PVX_000800 472 FEREKDR|YA 0.159 . PVX_000800 479 YAYFSQK|NI 0.073 . PVX_000800 491 LLTQINK|IM 0.061 . PVX_000800 503 ELHFNIK|KI 0.070 . PVX_000800 504 LHFNIKK|IC 0.088 . PVX_000800 520 NQFLISK|LR 0.054 . PVX_000800 522 FLISKLR|CM 0.098 . PVX_000800 526 KLRCMAR|GR 0.113 . PVX_000800 528 RCMARGR|NQ 0.088 . PVX_000800 534 RNQLQVR|LN 0.092 . PVX_000800 539 VRLNEFK|RL 0.064 . PVX_000800 540 RLNEFKR|LR 0.131 . PVX_000800 542 NEFKRLR|KR 0.066 . PVX_000800 543 EFKRLRK|RL 0.144 . PVX_000800 544 FKRLRKR|LN 0.127 . PVX_000800 547 LRKRLNK|RL 0.122 . PVX_000800 548 RKRLNKR|LK 0.207 . PVX_000800 550 RLNKRLK|KI 0.083 . PVX_000800 551 LNKRLKK|IS 0.409 . PVX_000800 555 LKKISEK|KF 0.062 . PVX_000800 556 KKISEKK|FL 0.128 . PVX_000800 561 KKFLHSK|VS 0.069 . PVX_000800 564 LHSKVSK|EV 0.126 . PVX_000800 568 VSKEVLK|GE 0.063 . PVX_000800 584 AWDVYLK|LL 0.053 . PVX_000800 588 YLKLLLK|RK 0.051 . PVX_000800 589 LKLLLKR|KT 0.148 . PVX_000800 590 KLLLKRK|TE 0.086 . PVX_000800 593 LKRKTER|DI 0.141 . PVX_000800 609 NFEDFSK|LK 0.063 . PVX_000800 611 EDFSKLK|EG 0.067 . PVX_000800 635 APWSVYK|TP 0.056 . PVX_000800 642 TPPNLSR|DN 0.125 . PVX_000800 659 FLNLHNK|SD 0.078 . PVX_000800 672 ASQVEIK|PT 0.072 . PVX_000800 676 EIKPTVK|TR 0.052 . PVX_000800 678 KPTVKTR|VE 0.090 . PVX_000800 697 VFDVFLR|KF 0.102 . PVX_000800 698 FDVFLRK|FG 0.096 . ____________________________^_________________

  • Fasta :-

    >PVX_000800 ATGATAATGAAAAATGCGATTAAAAACCTGGCCACGTGTTTATCCTGCGTCCTGAGTCTG CTTCGATACGTGCACTATGCATACCGGATTGACAACATAACAATTAAAAAAACACAATTT AGTGACGCCTTGGAAAGGACAGTACACAAAATTAATAAACGCGTCCAAAAGGACAGGGCC GTATACTATGATGTGTGCAAGTATAAAAAAATCCCCAAAATTTTAACCGAGAGGAATAAG CCCAAAAATAACCAAAAAGTCAAGTACATCGTAGGGATCGAAAACACGTGTGATGATACC TGCATCTGTGTCCTTGACTCAAATTTGAACATTGTTAAAAATGTGATCATATCCCATTTT AAGGTGGTTCACAAGTATGAGGGTGTGTATCCCTTTTTCATCAGCTCCATCAACCAGCTG TTTTTGAAGCCCTACGTGGAGAAGGCTCTCGAGGGCATTGACCAGAGCCGAATTAGCTGC TTCGCCTTCAGCGCGTGCCCGGGAATAGCCAAAAGTATGGAGGCAGCCAAAAACTACATA GGGGAGAGGAAGAAGCAGAACGAAAGCATACGAGTGAGTCCGATCAATCACGTTTTTGCC CATGTCCTTTCGCCCCTCTTTTTCCACGTCTACAATGATGAAAATACATACACGAATAGT GGCCAGTACAAGGGAGGAAAAAGCGACCAATCGAGAAATGAACGTAGCATCGACATGCAC ATCTCGGAGGAGGTCAGAAAGGATAAGGCACAAATGGAAAAAGTGAAGGACATTCTGCAG ATTCTCAATAGCAACGATGTGACGAAGCGGAAGATGGCGCTTTTGAGCGAAGAGGAATTT TTAAACTGCGGCGATTATGTGCTGCGGGGGGAGATGGGCAGCGAGGCGGTCAAGAATATG GACGGGGAGGCACCCCAGGATGTGAACAAGGAGGCACCCCAAAATGTATCCTACAAACGG GAGAACACCTCCTCTGCGCATAAACCGCAGTACAGTGGGGAGGCCCCCCAGGGAAGCCGC TTAACAGATGGATACCTCTGCGCGTTAGTGTCCGGAGGAAGCACACAAATCTTCAAAGTG CAAAGGAACAAAAAAAACGAAATCAATTTGAGCAAATTAGCCCAAACGGTCGATATTTCC ATTGGAGACATAATTGACAAAATTGCCAGGCTGCTGGGTCTGCCCGTTGGGTTGGGGGGA GGTCCCTTCCTTGAGAGGAAGTCAGCAGAGTTCGTTCGAAGAATGAAGGAGCAGCGGCTA AGTGGGGAGGCTTGCGCGGATCCATTTCAGCCCTTTCCCGTTCCCTTCTGCGCGAACAAC CGAGTCGATTTTTCCTTCTCAGGCCTGTACAACCACCTGCGCAAAATCATCGAGGAGTCA AAAAAGGGAGAGTCCTTCGAGCGGGAAAAAGACAGGTATGCCTACTTCAGTCAGAAAAAC ATTTTCAACCACCTCCTGACGCAGATTAACAAAATTATGTATTTCTCTGAGCTGCATTTT AATATAAAAAAAATATGCCTAGTGGGGGGAGTCGGGTGCAACCAATTTTTGATTAGCAAG TTGAGATGCATGGCTAGGGGGAGAAATCAATTGCAAGTTCGGCTAAACGAATTTAAAAGG TTAAGGAAAAGGCTAAATAAGAGGTTAAAAAAAATAAGTGAGAAAAAGTTTTTACATTCG AAAGTTTCCAAGGAAGTGCTCAAAGGGGAAATAGACTTCAGTGCATCCCTGGCGTGGGAT GTTTACCTAAAGCTTCTTTTAAAGAGGAAAACAGAACGAGATATCTTGTCAGCTTTAGAG TGTTTTAATTTTGAGGACTTTTCGAAACTGAAGGAGGGGGGGCACTTCCTTCTGGAGGGT CATTCCGCTTCCCCCGAAAGTGAAGCGCCCTGGAGCGTGTACAAGACGCCGCCCAACCTC AGCAGAGACAACGCGGCCATGATTTGCTTTAGCGCCTTTTTGAATTTGCACAACAAAAGC GACCTCCATGAGGATGCGTCTCAGGTTGAAATTAAACCAACGGTGAAGACCCGGGTGGAA AATAACTTCCTCCTCTTTTCCGACATGATCGTTTTTGATGTGTTTCTGCGGAAGTTTGGC GCCCAGGGGGGGTGA
  • Download Fasta

  • Fasta :-

    MIMKNAIKNLATCLSCVLSLLRYVHYAYRIDNITIKKTQFSDALERTVHKINKRVQKDRA VYYDVCKYKKIPKILTERNKPKNNQKVKYIVGIENTCDDTCICVLDSNLNIVKNVIISHF KVVHKYEGVYPFFISSINQLFLKPYVEKALEGIDQSRISCFAFSACPGIAKSMEAAKNYI GERKKQNESIRVSPINHVFAHVLSPLFFHVYNDENTYTNSGQYKGGKSDQSRNERSIDMH ISEEVRKDKAQMEKVKDILQILNSNDVTKRKMALLSEEEFLNCGDYVLRGEMGSEAVKNM DGEAPQDVNKEAPQNVSYKRENTSSAHKPQYSGEAPQGSRLTDGYLCALVSGGSTQIFKV QRNKKNEINLSKLAQTVDISIGDIIDKIARLLGLPVGLGGGPFLERKSAEFVRRMKEQRL SGEACADPFQPFPVPFCANNRVDFSFSGLYNHLRKIIEESKKGESFEREKDRYAYFSQKN IFNHLLTQINKIMYFSELHFNIKKICLVGGVGCNQFLISKLRCMARGRNQLQVRLNEFKR LRKRLNKRLKKISEKKFLHSKVSKEVLKGEIDFSASLAWDVYLKLLLKRKTERDILSALE CFNFEDFSKLKEGGHFLLEGHSASPESEAPWSVYKTPPNLSRDNAAMICFSAFLNLHNKS DLHEDASQVEIKPTVKTRVENNFLLFSDMIVFDVFLRKFGAQGG

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_000800421 SEQRLSGEAC0.993unspPVX_000800421 SEQRLSGEAC0.993unspPVX_000800421 SEQRLSGEAC0.993unspPVX_000800465 SKKGESFERE0.996unspPVX_000800477 SYAYFSQKNI0.992unspPVX_000800193 SSIRVSPINH0.997unspPVX_000800408 SLERKSAEFV0.993unsp
PVX_000800      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India