PVX_001730 | enoyl-CoA hydratase-related protein, putative

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:  GO:0003860      

  • Computed_GO_Functions:  3-hydroxyisobutyryl-CoA hydrolase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_001730OTHER0.9711200.0000320.028848
No Results

  • Fasta :-

    >PVX_001730 MQHSEVAQHCRTTLSPIMIPPQCRPPMRRLMCNHRKHLTTSASAHCRPCMPTKGRPPWSV GRKLIRTSIFKDDEIYLDPLQIHNEEPNKTNYLNRASPNECVYTRSNVGMNAILINEKYM TLKCINQLYKELRNGEINFTKRFTFLTSISNESFSHGYNLLHLLKIVEVHQKGKNKKHAD VLKKILCNINELSYLTFSYRKPLIVYCNGSVRGSGGFIPFLANNSAAYFHSSYSYTNLRY SFLPYGGISYVLANLRGSIGFYLALTGETIKSADLIWCGLTKRWVAEECLELMELTSESQ LEVSEQDANLLLEEHFLRVPKMYSLKSYEEIIHDHFKYPSLMQIMAKLDASRKRTHPDER VRLWAEKTYQQICSQPPIAAHLTFEIMNLLRTHKMELLKKAQVTKKLYNQMTQNSYKVVP TTREEVSLAELKFAIDSELLVKALNMETNAIANFISCPDALNGITSYLVKDTDHSFKCSY LNNSLLETKKDIIHYFLFYKNEYEFAVRERPDISFSSLSALDRCNQPCGAYDRHFYAEQS KRWSDDYLEDQLDEINRLAL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_001730.fa Sequence name : PVX_001730 Sequence length : 560 VALUES OF COMPUTED PARAMETERS Coef20 : 3.816 CoefTot : -2.458 ChDiff : 10 ZoneTo : 71 KR : 13 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.912 1.076 0.063 0.462 MesoH : 0.170 0.386 -0.151 0.304 MuHd_075 : 38.930 24.868 9.001 7.728 MuHd_095 : 39.900 21.501 10.750 9.377 MuHd_100 : 38.429 20.277 8.584 9.657 MuHd_105 : 37.944 19.607 9.520 9.357 Hmax_075 : 10.150 14.500 0.440 4.083 Hmax_095 : 13.000 9.625 2.876 5.420 Hmax_100 : 13.000 6.900 0.724 5.030 Hmax_105 : 11.200 12.900 3.854 5.122 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0694 0.9306 DFMC : 0.0603 0.9397 This protein is probably imported in mitochondria. f(Ser) = 0.0845 f(Arg) = 0.1268 CMi = 0.34149 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 560 PVX_001730 MQHSEVAQHCRTTLSPIMIPPQCRPPMRRLMCNHRKHLTTSASAHCRPCMPTKGRPPWSVGRKLIRTSIFKDDEIYLDPL 80 QIHNEEPNKTNYLNRASPNECVYTRSNVGMNAILINEKYMTLKCINQLYKELRNGEINFTKRFTFLTSISNESFSHGYNL 160 LHLLKIVEVHQKGKNKKHADVLKKILCNINELSYLTFSYRKPLIVYCNGSVRGSGGFIPFLANNSAAYFHSSYSYTNLRY 240 SFLPYGGISYVLANLRGSIGFYLALTGETIKSADLIWCGLTKRWVAEECLELMELTSESQLEVSEQDANLLLEEHFLRVP 320 KMYSLKSYEEIIHDHFKYPSLMQIMAKLDASRKRTHPDERVRLWAEKTYQQICSQPPIAAHLTFEIMNLLRTHKMELLKK 400 AQVTKKLYNQMTQNSYKVVPTTREEVSLAELKFAIDSELLVKALNMETNAIANFISCPDALNGITSYLVKDTDHSFKCSY 480 LNNSLLETKKDIIHYFLFYKNEYEFAVRERPDISFSSLSALDRCNQPCGAYDRHFYAEQSKRWSDDYLEDQLDEINRLAL 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_001730 11 EVAQHCR|TT 0.088 . PVX_001730 24 MIPPQCR|PP 0.083 . PVX_001730 28 QCRPPMR|RL 0.100 . PVX_001730 29 CRPPMRR|LM 0.151 . PVX_001730 35 RLMCNHR|KH 0.070 . PVX_001730 36 LMCNHRK|HL 0.107 . PVX_001730 47 SASAHCR|PC 0.119 . PVX_001730 53 RPCMPTK|GR 0.067 . PVX_001730 55 CMPTKGR|PP 0.094 . PVX_001730 62 PPWSVGR|KL 0.081 . PVX_001730 63 PWSVGRK|LI 0.106 . PVX_001730 66 VGRKLIR|TS 0.087 . PVX_001730 71 IRTSIFK|DD 0.079 . PVX_001730 89 HNEEPNK|TN 0.060 . PVX_001730 95 KTNYLNR|AS 0.093 . PVX_001730 105 NECVYTR|SN 0.112 . PVX_001730 118 AILINEK|YM 0.054 . PVX_001730 123 EKYMTLK|CI 0.070 . PVX_001730 130 CINQLYK|EL 0.075 . PVX_001730 133 QLYKELR|NG 0.091 . PVX_001730 141 GEINFTK|RF 0.059 . PVX_001730 142 EINFTKR|FT 0.168 . PVX_001730 165 NLLHLLK|IV 0.076 . PVX_001730 172 IVEVHQK|GK 0.071 . PVX_001730 174 EVHQKGK|NK 0.067 . PVX_001730 176 HQKGKNK|KH 0.076 . PVX_001730 177 QKGKNKK|HA 0.167 . PVX_001730 183 KHADVLK|KI 0.069 . PVX_001730 184 HADVLKK|IL 0.104 . PVX_001730 200 YLTFSYR|KP 0.073 . PVX_001730 201 LTFSYRK|PL 0.073 . PVX_001730 212 YCNGSVR|GS 0.127 . PVX_001730 239 YSYTNLR|YS 0.078 . PVX_001730 256 YVLANLR|GS 0.070 . PVX_001730 271 LTGETIK|SA 0.082 . PVX_001730 282 IWCGLTK|RW 0.064 . PVX_001730 283 WCGLTKR|WV 0.195 . PVX_001730 318 LEEHFLR|VP 0.064 . PVX_001730 321 HFLRVPK|MY 0.113 . PVX_001730 326 PKMYSLK|SY 0.114 . PVX_001730 337 IIHDHFK|YP 0.081 . PVX_001730 347 LMQIMAK|LD 0.064 . PVX_001730 352 AKLDASR|KR 0.068 . PVX_001730 353 KLDASRK|RT 0.090 . PVX_001730 354 LDASRKR|TH 0.193 . PVX_001730 360 RTHPDER|VR 0.092 . PVX_001730 362 HPDERVR|LW 0.088 . PVX_001730 367 VRLWAEK|TY 0.068 . PVX_001730 391 EIMNLLR|TH 0.070 . PVX_001730 394 NLLRTHK|ME 0.088 . PVX_001730 399 HKMELLK|KA 0.063 . PVX_001730 400 KMELLKK|AQ 0.077 . PVX_001730 405 KKAQVTK|KL 0.082 . PVX_001730 406 KAQVTKK|LY 0.116 . PVX_001730 417 MTQNSYK|VV 0.081 . PVX_001730 423 KVVPTTR|EE 0.065 . PVX_001730 432 VSLAELK|FA 0.075 . PVX_001730 442 DSELLVK|AL 0.063 . PVX_001730 470 ITSYLVK|DT 0.108 . PVX_001730 477 DTDHSFK|CS 0.059 . PVX_001730 489 NSLLETK|KD 0.057 . PVX_001730 490 SLLETKK|DI 0.118 . PVX_001730 500 HYFLFYK|NE 0.056 . PVX_001730 508 EYEFAVR|ER 0.070 . PVX_001730 510 EFAVRER|PD 0.077 . PVX_001730 523 SLSALDR|CN 0.105 . PVX_001730 533 PCGAYDR|HF 0.091 . PVX_001730 541 FYAEQSK|RW 0.061 . PVX_001730 542 YAEQSKR|WS 0.295 . PVX_001730 557 QLDEINR|LA 0.081 . ____________________________^_________________

  • Fasta :-

    >PVX_001730 ATGCAGCACAGTGAAGTTGCCCAACACTGTCGCACCACACTGTCGCCAATAATGATCCCC CCACAATGCCGCCCCCCAATGCGGCGCCTCATGTGCAACCACCGCAAACACCTCACCACA AGCGCCAGTGCGCACTGCCGCCCGTGCATGCCCACCAAGGGCCGCCCCCCCTGGAGCGTT GGCAGAAAGCTCATCCGAACGTCCATCTTCAAAGACGATGAGATATACCTGGACCCCCTC CAAATTCACAACGAAGAACCGAACAAAACAAATTACCTCAACAGAGCATCACCGAACGAG TGCGTGTACACTCGCAGCAACGTAGGAATGAATGCCATCCTCATAAATGAAAAATACATG ACCCTAAAATGTATTAACCAGTTGTATAAGGAGCTACGAAATGGAGAAATCAATTTTACA AAAAGGTTTACCTTTCTAACGTCCATCAGCAACGAGTCCTTTAGCCACGGGTACAATTTA CTCCACCTGTTGAAGATCGTGGAGGTGCATCAAAAAGGGAAAAACAAAAAGCACGCAGAT GTCTTGAAAAAGATTCTGTGCAACATTAATGAGTTAAGTTACCTGACCTTTTCATATAGA AAGCCACTCATCGTCTACTGTAACGGCAGCGTTCGAGGCTCCGGGGGGTTCATACCCTTC CTGGCCAACAACAGCGCTGCGTATTTTCACTCCTCATATTCCTACACCAATTTGAGGTAC TCCTTTTTGCCGTATGGCGGCATCTCCTACGTGCTAGCCAATTTGAGAGGATCCATTGGA TTCTACTTAGCCCTAACAGGGGAGACAATCAAATCTGCGGACCTAATTTGGTGCGGTTTG ACGAAGAGGTGGGTAGCAGAAGAGTGTCTAGAACTGATGGAACTCACATCAGAATCGCAA CTGGAGGTGTCCGAACAAGATGCCAACCTCCTCTTGGAAGAGCATTTTTTGAGAGTCCCC AAAATGTACTCCTTAAAAAGTTACGAAGAAATAATTCACGACCATTTTAAGTACCCCTCC CTGATGCAAATTATGGCCAAGCTAGATGCATCTAGGAAGAGAACCCATCCCGATGAACGG GTTCGCCTCTGGGCAGAAAAAACATACCAACAGATCTGCTCGCAGCCACCTATAGCGGCA CATCTAACATTTGAAATTATGAACCTACTTAGAACCCACAAAATGGAGCTACTCAAAAAA GCCCAAGTGACAAAAAAGCTATACAATCAGATGACACAAAATAGCTACAAGGTAGTCCCA ACGACCAGGGAAGAAGTGAGCTTGGCTGAGCTCAAGTTTGCCATCGATTCGGAGCTCCTC GTAAAAGCATTAAACATGGAAACGAATGCCATCGCGAATTTCATTTCCTGTCCAGATGCT CTCAATGGGATCACCTCCTACCTGGTGAAAGACACGGACCACTCCTTCAAATGCTCCTAC CTGAATAACTCCCTCCTTGAGACCAAAAAGGACATCATTCATTATTTCCTCTTTTATAAA AATGAGTACGAATTTGCTGTTCGTGAGAGGCCAGACATAAGCTTCTCCAGCCTGAGTGCC CTCGATCGGTGCAACCAACCCTGTGGTGCTTACGATAGGCACTTTTACGCAGAGCAGAGC AAACGATGGAGTGATGACTATCTGGAGGATCAACTGGACGAGATTAACAGGCTTGCCCTA TGA
  • Download Fasta

  • Fasta :-

    MQHSEVAQHCRTTLSPIMIPPQCRPPMRRLMCNHRKHLTTSASAHCRPCMPTKGRPPWSV GRKLIRTSIFKDDEIYLDPLQIHNEEPNKTNYLNRASPNECVYTRSNVGMNAILINEKYM TLKCINQLYKELRNGEINFTKRFTFLTSISNESFSHGYNLLHLLKIVEVHQKGKNKKHAD VLKKILCNINELSYLTFSYRKPLIVYCNGSVRGSGGFIPFLANNSAAYFHSSYSYTNLRY SFLPYGGISYVLANLRGSIGFYLALTGETIKSADLIWCGLTKRWVAEECLELMELTSESQ LEVSEQDANLLLEEHFLRVPKMYSLKSYEEIIHDHFKYPSLMQIMAKLDASRKRTHPDER VRLWAEKTYQQICSQPPIAAHLTFEIMNLLRTHKMELLKKAQVTKKLYNQMTQNSYKVVP TTREEVSLAELKFAIDSELLVKALNMETNAIANFISCPDALNGITSYLVKDTDHSFKCSY LNNSLLETKKDIIHYFLFYKNEYEFAVRERPDISFSSLSALDRCNQPCGAYDRHFYAEQS KRWSDDYLEDQLDEINRLAL

  • title: substrate binding site
  • coordinates: E152,H156,G157,Y158,N159,L160,S210,R212,G213,G215,S234,Y235,L238
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_001730475 SDTDHSFKCS0.994unspPVX_001730475 SDTDHSFKCS0.994unspPVX_001730475 SDTDHSFKCS0.994unspPVX_001730327 SYSLKSYEEI0.997unspPVX_001730351 SKLDASRKRT0.996unsp
PVX_001730      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India