PVX_001780 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

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  • Curated_GO_Function_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PVX_001780SP0.0123620.9874380.000200CS pos: 30-31. GEG-KW. Pr: 0.6636
No Results

  • Fasta :-

    >PVX_001780 MDLRHVKCRGWFVLPLLLPLLLPLLLRGEGKWHGGMHLGVAREDDHMSSWDDHPGEDTPR VYNLGNVKCEQLEEETYGGGLLGSPKGETNPSGMNTVQWITWKGKRDGGEAAPLGGGPPY SCVDMLPSRHKVTKRMLSSVMGDHLEVPTSGGHSPDGSFQGSVLNVHFTENKNLYTNVKV GGQPLKLALNSRVEGIYVFMKDSQACHVDEEGEEKNRVCYDPNTSRNSTWCNNDLLCLPA ILSKSYECYSDSNLLLENKAEYPSMYYDSLKFTESHVEGSDDVEVLDLVKAAGAEKAAGE GDAAGGGDAAGGGDAAGGGEEVGYANAAGGETDATFQNTDVKLVTDLSLYKGWSLFKDTD GMMGLAGRELSCRNVSAWNTIVEKSNSLYALDVNLPEGSVKPFVESPTQEDSKRGASSYA KFVPKKASSNEADGAAEPSGSTSEIHIGDYKKSFGPIVWSEPRERGGIFSDSFMQFTLYN LEVCQNNIFGKYSSNWQGVIDLSSKCLVLPKMFWLSLMEYLPVNKNDERCIPKRKEVTFD EGTVPRMCAVDPGSRPLPVLKFYLSDNDTVSDNNIGGGSGGEIGGDPPRGGIQEVHIPLD NLIINEEGQNDGYLCVLPDVHEGVSSENSGRTTKPLIKFGTYVINNFYVVVDQENYRVGF ANKKEYHSSNDRCTQRAQCVGNQFYEPALNICVDPDCSVWYFYTLNEETKKCESISSRFY VFLLIILLLLLLDIQSYYFYRKSVHVAKVSSR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_001780.fa Sequence name : PVX_001780 Sequence length : 752 VALUES OF COMPUTED PARAMETERS Coef20 : 4.113 CoefTot : -1.528 ChDiff : -30 ZoneTo : 42 KR : 6 DE : 2 CleavSite : 29 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.153 2.671 0.322 0.883 MesoH : -0.584 0.380 -0.333 0.217 MuHd_075 : 27.020 18.164 9.375 6.741 MuHd_095 : 25.358 21.240 6.450 6.342 MuHd_100 : 23.335 18.798 4.467 5.896 MuHd_105 : 20.041 17.157 5.303 5.506 Hmax_075 : 5.600 10.850 -0.268 3.517 Hmax_095 : 13.700 27.000 4.459 5.090 Hmax_100 : 4.500 23.200 4.094 3.870 Hmax_105 : 13.300 16.363 -1.128 5.550 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9809 0.0191 DFMC : 0.9898 0.0102
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 752 PVX_001780 MDLRHVKCRGWFVLPLLLPLLLPLLLRGEGKWHGGMHLGVAREDDHMSSWDDHPGEDTPRVYNLGNVKCEQLEEETYGGG 80 LLGSPKGETNPSGMNTVQWITWKGKRDGGEAAPLGGGPPYSCVDMLPSRHKVTKRMLSSVMGDHLEVPTSGGHSPDGSFQ 160 GSVLNVHFTENKNLYTNVKVGGQPLKLALNSRVEGIYVFMKDSQACHVDEEGEEKNRVCYDPNTSRNSTWCNNDLLCLPA 240 ILSKSYECYSDSNLLLENKAEYPSMYYDSLKFTESHVEGSDDVEVLDLVKAAGAEKAAGEGDAAGGGDAAGGGDAAGGGE 320 EVGYANAAGGETDATFQNTDVKLVTDLSLYKGWSLFKDTDGMMGLAGRELSCRNVSAWNTIVEKSNSLYALDVNLPEGSV 400 KPFVESPTQEDSKRGASSYAKFVPKKASSNEADGAAEPSGSTSEIHIGDYKKSFGPIVWSEPRERGGIFSDSFMQFTLYN 480 LEVCQNNIFGKYSSNWQGVIDLSSKCLVLPKMFWLSLMEYLPVNKNDERCIPKRKEVTFDEGTVPRMCAVDPGSRPLPVL 560 KFYLSDNDTVSDNNIGGGSGGEIGGDPPRGGIQEVHIPLDNLIINEEGQNDGYLCVLPDVHEGVSSENSGRTTKPLIKFG 640 TYVINNFYVVVDQENYRVGFANKKEYHSSNDRCTQRAQCVGNQFYEPALNICVDPDCSVWYFYTLNEETKKCESISSRFY 720 VFLLIILLLLLLDIQSYYFYRKSVHVAKVSSR 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................ 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_001780 4 ---MDLR|HV 0.097 . PVX_001780 7 MDLRHVK|CR 0.115 . PVX_001780 9 LRHVKCR|GW 0.184 . PVX_001780 27 LLPLLLR|GE 0.093 . PVX_001780 31 LLRGEGK|WH 0.077 . PVX_001780 42 MHLGVAR|ED 0.089 . PVX_001780 60 PGEDTPR|VY 0.074 . PVX_001780 68 YNLGNVK|CE 0.057 . PVX_001780 86 GLLGSPK|GE 0.059 . PVX_001780 103 VQWITWK|GK 0.078 . PVX_001780 105 WITWKGK|RD 0.067 . PVX_001780 106 ITWKGKR|DG 0.254 . PVX_001780 129 VDMLPSR|HK 0.084 . PVX_001780 131 MLPSRHK|VT 0.066 . PVX_001780 134 SRHKVTK|RM 0.079 . PVX_001780 135 RHKVTKR|ML 0.318 . PVX_001780 172 VHFTENK|NL 0.062 . PVX_001780 179 NLYTNVK|VG 0.065 . PVX_001780 186 VGGQPLK|LA 0.063 . PVX_001780 192 KLALNSR|VE 0.103 . PVX_001780 201 GIYVFMK|DS 0.079 . PVX_001780 215 DEEGEEK|NR 0.054 . PVX_001780 217 EGEEKNR|VC 0.073 . PVX_001780 226 YDPNTSR|NS 0.076 . PVX_001780 244 LPAILSK|SY 0.083 . PVX_001780 259 NLLLENK|AE 0.057 . PVX_001780 271 MYYDSLK|FT 0.082 . PVX_001780 290 EVLDLVK|AA 0.066 . PVX_001780 296 KAAGAEK|AA 0.084 . PVX_001780 342 FQNTDVK|LV 0.068 . PVX_001780 351 TDLSLYK|GW 0.062 . PVX_001780 357 KGWSLFK|DT 0.074 . PVX_001780 368 MMGLAGR|EL 0.087 . PVX_001780 373 GRELSCR|NV 0.169 . PVX_001780 384 WNTIVEK|SN 0.074 . PVX_001780 401 LPEGSVK|PF 0.069 . PVX_001780 413 PTQEDSK|RG 0.056 . PVX_001780 414 TQEDSKR|GA 0.318 . PVX_001780 421 GASSYAK|FV 0.106 . PVX_001780 425 YAKFVPK|KA 0.087 . PVX_001780 426 AKFVPKK|AS 0.137 . PVX_001780 451 IHIGDYK|KS 0.060 . PVX_001780 452 HIGDYKK|SF 0.246 . PVX_001780 463 IVWSEPR|ER 0.099 . PVX_001780 465 WSEPRER|GG 0.084 . PVX_001780 491 QNNIFGK|YS 0.098 . PVX_001780 505 VIDLSSK|CL 0.053 . PVX_001780 511 KCLVLPK|MF 0.064 . PVX_001780 525 EYLPVNK|ND 0.056 . PVX_001780 529 VNKNDER|CI 0.080 . PVX_001780 533 DERCIPK|RK 0.064 . PVX_001780 534 ERCIPKR|KE 0.147 . PVX_001780 535 RCIPKRK|EV 0.129 . PVX_001780 546 DEGTVPR|MC 0.089 . PVX_001780 555 AVDPGSR|PL 0.062 . PVX_001780 561 RPLPVLK|FY 0.066 . PVX_001780 589 IGGDPPR|GG 0.103 . PVX_001780 631 SSENSGR|TT 0.100 . PVX_001780 634 NSGRTTK|PL 0.148 . PVX_001780 638 TTKPLIK|FG 0.068 . PVX_001780 657 VDQENYR|VG 0.079 . PVX_001780 663 RVGFANK|KE 0.058 . PVX_001780 664 VGFANKK|EY 0.085 . PVX_001780 672 YHSSNDR|CT 0.101 . PVX_001780 676 NDRCTQR|AQ 0.099 . PVX_001780 710 TLNEETK|KC 0.070 . PVX_001780 711 LNEETKK|CE 0.090 . PVX_001780 718 CESISSR|FY 0.106 . PVX_001780 741 QSYYFYR|KS 0.094 . PVX_001780 742 SYYFYRK|SV 0.191 . PVX_001780 748 KSVHVAK|VS 0.078 . PVX_001780 752 VAKVSSR|-- 0.101 . ____________________________^_________________

  • Fasta :-

    >PVX_001780 ATGGATTTGCGTCATGTAAAATGCAGAGGCTGGTTTGTTCTGCCACTCCTTCTGCCGCTC CTTCTGCCGCTGCTCCTGCGGGGGGAGGGGAAGTGGCATGGGGGAATGCACTTGGGTGTA GCCAGGGAGGATGATCATATGAGCAGTTGGGATGACCACCCTGGTGAGGATACCCCGCGC GTGTACAACTTGGGAAACGTAAAATGTGAACAGTTGGAAGAGGAGACATACGGAGGGGGG TTGTTGGGGTCCCCCAAAGGGGAGACAAACCCATCTGGGATGAACACAGTGCAGTGGATC ACGTGGAAGGGGAAGAGGGACGGGGGAGAAGCAGCTCCACTGGGGGGTGGTCCCCCTTAC AGCTGCGTTGACATGCTCCCCAGTAGGCATAAGGTGACCAAGCGAATGCTCTCGTCTGTG ATGGGTGACCATCTGGAAGTACCGACCAGCGGTGGACATAGCCCAGATGGTTCCTTCCAA GGGAGTGTATTAAATGTGCATTTTACGGAGAACAAGAATTTATATACAAATGTGAAAGTG GGAGGACAGCCGTTGAAGCTGGCTCTGAACAGTAGAGTGGAGGGCATATACGTTTTTATG AAGGACTCCCAAGCGTGCCACGTAGATGAGGAGGGGGAGGAGAAGAATCGGGTCTGCTAC GATCCCAACACGTCTAGGAATTCCACGTGGTGTAACAACGACCTTCTGTGCCTGCCCGCC ATCCTGTCCAAGTCGTACGAGTGCTACAGCGACAGCAACTTGCTGCTGGAGAATAAGGCG GAGTACCCCAGCATGTATTACGACTCGCTCAAGTTCACGGAGAGCCACGTGGAGGGCTCG GACGACGTGGAGGTGCTCGATTTGGTTAAAGCGGCGGGAGCGGAGAAAGCGGCGGGTGAA GGGGACGCGGCGGGTGGAGGGGACGCGGCGGGTGGAGGGGACGCGGCGGGTGGAGGGGAA GAAGTGGGTTACGCGAACGCTGCTGGCGGAGAGACAGACGCCACCTTCCAGAACACAGAC GTGAAGCTGGTCACGGACCTGAGCCTCTACAAAGGGTGGAGCCTCTTCAAAGACACCGAC GGGATGATGGGGCTGGCCGGGAGGGAACTCAGCTGCAGGAACGTCAGCGCGTGGAACACC ATCGTCGAGAAGAGCAACTCGCTCTACGCCCTGGATGTCAATTTGCCGGAAGGTTCGGTC AAACCGTTCGTGGAGTCCCCTACCCAGGAGGACTCCAAAAGGGGGGCTTCATCCTACGCT AAGTTCGTTCCGAAGAAGGCAAGCTCGAACGAAGCAGATGGAGCGGCAGAGCCGAGTGGA AGCACATCCGAAATACACATAGGGGATTATAAAAAAAGCTTCGGGCCAATCGTATGGTCG GAGCCGAGAGAAAGAGGAGGGATCTTCTCTGACTCCTTCATGCAGTTTACCCTGTACAAT TTGGAAGTGTGTCAAAATAATATTTTTGGAAAGTACAGTAGCAACTGGCAGGGAGTGATT GACTTGAGTAGCAAGTGTTTGGTACTTCCCAAGATGTTTTGGCTGAGCCTGATGGAGTAC CTACCCGTGAACAAGAATGATGAGAGGTGCATCCCCAAGAGGAAGGAGGTTACCTTTGAC GAGGGCACCGTGCCGCGGATGTGCGCCGTGGACCCCGGCAGCCGGCCCCTCCCCGTCCTC AAGTTTTACCTCTCGGACAACGACACGGTGAGCGACAACAACATCGGGGGGGGGAGCGGT GGAGAGATCGGTGGAGACCCCCCCCGTGGGGGCATCCAAGAAGTGCACATCCCGCTGGAC AACCTGATCATCAACGAGGAGGGCCAGAACGACGGCTACCTCTGCGTGCTGCCGGACGTG CACGAAGGAGTCTCCAGCGAAAACAGCGGGAGGACCACCAAGCCGTTGATCAAATTCGGC ACATACGTAATAAACAATTTCTACGTCGTGGTGGACCAGGAGAACTACAGAGTCGGCTTC GCCAACAAGAAAGAGTACCACTCTTCAAATGACAGATGCACACAGAGGGCCCAGTGTGTG GGGAATCAATTTTATGAGCCCGCCTTGAACATCTGCGTGGACCCCGACTGCTCCGTTTGG TACTTTTACACGCTGAACGAGGAGACCAAGAAGTGCGAATCTATTTCCTCTCGCTTCTAC GTCTTCCTGCTCATCATCCTGCTGCTGCTGCTGTTGGATATTCAGTCGTACTACTTCTAC AGGAAGTCCGTGCACGTGGCGAAGGTGTCCTCTCGCTAG
  • Download Fasta

  • Fasta :-

    MDLRHVKCRGWFVLPLLLPLLLPLLLRGEGKWHGGMHLGVAREDDHMSSWDDHPGEDTPR VYNLGNVKCEQLEEETYGGGLLGSPKGETNPSGMNTVQWITWKGKRDGGEAAPLGGGPPY SCVDMLPSRHKVTKRMLSSVMGDHLEVPTSGGHSPDGSFQGSVLNVHFTENKNLYTNVKV GGQPLKLALNSRVEGIYVFMKDSQACHVDEEGEEKNRVCYDPNTSRNSTWCNNDLLCLPA ILSKSYECYSDSNLLLENKAEYPSMYYDSLKFTESHVEGSDDVEVLDLVKAAGAEKAAGE GDAAGGGDAAGGGDAAGGGEEVGYANAAGGETDATFQNTDVKLVTDLSLYKGWSLFKDTD GMMGLAGRELSCRNVSAWNTIVEKSNSLYALDVNLPEGSVKPFVESPTQEDSKRGASSYA KFVPKKASSNEADGAAEPSGSTSEIHIGDYKKSFGPIVWSEPRERGGIFSDSFMQFTLYN LEVCQNNIFGKYSSNWQGVIDLSSKCLVLPKMFWLSLMEYLPVNKNDERCIPKRKEVTFD EGTVPRMCAVDPGSRPLPVLKFYLSDNDTVSDNNIGGGSGGEIGGDPPRGGIQEVHIPLD NLIINEEGQNDGYLCVLPDVHEGVSSENSGRTTKPLIKFGTYVINNFYVVVDQENYRVGF ANKKEYHSSNDRCTQRAQCVGNQFYEPALNICVDPDCSVWYFYTLNEETKKCESISSRFY VFLLIILLLLLLDIQSYYFYRKSVHVAKVSSR

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_001780138 SKRMLSSVMG0.994unspPVX_001780138 SKRMLSSVMG0.994unspPVX_001780138 SKRMLSSVMG0.994unspPVX_001780154 SSGGHSPDGS0.997unspPVX_001780324 YEEVGYANAA0.99unspPVX_001780668 SKEYHSSNDR0.994unspPVX_00178049 SDHMSSWDDH0.996unspPVX_00178058 TPGEDTPRVY0.996unsp
PVX_001780      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India