PVX_003825 | serine-repeat antigen 4 (SERA)

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_003825OTHER0.7956450.1461070.058248
No Results

  • Fasta :-

    >PVX_003825 MIAHLQLDLRPKMILHCLVLHHLTLGNSIQVITALLKDANGVKVTGACGAHFELSLVPHI SISAETKTNDIKLRPILHKLLDAKEADVGTTKLDNAIQFEPNQEKLKNKCQPGKENEDTF KFLVFIHEGELTLKWKVYNKSAPADASKEVDVRKYTLKNLDQPITTVQVRSSKVDEETLL VESKSYYVNRDIPDKCDVIATDCYLNGNVDIEKCFQCTLLMENSDTTNECFKYVSSQVTD KFKDIKVNAQDEEDPAEVELAASIGKILQGVFKKGEAAHIELLTFDEVDAALKEELLNYC SSMKEVDASGVLDQYQLGSEEDIFANLTSILKNHAGETKSTLQNKLKNPAICLKNADEWV ESKKGLLLPSLSHTNGEVTPPETPKEDHMSDADEGQQSVPYDAVINLVSAEEKNNQSSLI EDSTFCTEDYCNRWKDDTSCVSKIEAEDQGVCSTSWLFASKVHLETIKCMKGYDHIATSA LYVANCSSKEAKDKCHAASNPLEFLDILEETQFLPAESNLPYSYKAVSNACPEPKSHWQN LWENVKLLEKQYEPNAVSTKGYTAYQSDHFKGNMDAFINLVKSQVMSKGSVIAYVKADEL MGYDFNGKNVHSLCGSETPNHAVNIIGYGNYVSAEGVKKSYWLLRNSWGKYWGDDGNFKI DMHGADHCQHNFIHTAAVFNLEMPLVQSAAKKDNHLYSYYLKGSPDLYQNMYYKGFGSQG GNAKGGEKGQVGTPVVSGQEEEEVASDRQDQVREQSHVEASAGPDGLQAGQVDVKAEEED TKAGQGGEDSAATQDGGSHGPGAVQPLAEQSDTRGVASNLPDGSQLPGSGHEAGQSGHGV AESGSEVPESRPEAPPGEPGAAHSEPQVTESEHGVPPSGSGVPPGGPGVPPSGPEVGRSE TGETLSQPAESPPLPNPPSNTAKITQVLHILKHVKQGKVKTRLVTYDSNAAMSADHVCSR AVASDPEKQDECVKFCDDHWNDCKDKISPAYCLTQIRGKKDCFFCYI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_003825.fa Sequence name : PVX_003825 Sequence length : 1007 VALUES OF COMPUTED PARAMETERS Coef20 : 4.106 CoefTot : -1.669 ChDiff : -52 ZoneTo : 52 KR : 4 DE : 2 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.012 1.271 0.011 0.506 MesoH : -0.411 0.524 -0.371 0.247 MuHd_075 : 29.460 28.357 10.525 7.406 MuHd_095 : 26.487 20.129 8.934 4.973 MuHd_100 : 27.708 26.440 9.021 6.709 MuHd_105 : 31.491 31.113 10.752 8.484 Hmax_075 : 18.400 23.900 4.449 7.150 Hmax_095 : 15.200 16.900 3.253 5.390 Hmax_100 : 16.800 21.500 3.959 6.540 Hmax_105 : 15.600 17.300 3.532 6.050 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8560 0.1440 DFMC : 0.7804 0.2196
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1007 PVX_003825 MIAHLQLDLRPKMILHCLVLHHLTLGNSIQVITALLKDANGVKVTGACGAHFELSLVPHISISAETKTNDIKLRPILHKL 80 LDAKEADVGTTKLDNAIQFEPNQEKLKNKCQPGKENEDTFKFLVFIHEGELTLKWKVYNKSAPADASKEVDVRKYTLKNL 160 DQPITTVQVRSSKVDEETLLVESKSYYVNRDIPDKCDVIATDCYLNGNVDIEKCFQCTLLMENSDTTNECFKYVSSQVTD 240 KFKDIKVNAQDEEDPAEVELAASIGKILQGVFKKGEAAHIELLTFDEVDAALKEELLNYCSSMKEVDASGVLDQYQLGSE 320 EDIFANLTSILKNHAGETKSTLQNKLKNPAICLKNADEWVESKKGLLLPSLSHTNGEVTPPETPKEDHMSDADEGQQSVP 400 YDAVINLVSAEEKNNQSSLIEDSTFCTEDYCNRWKDDTSCVSKIEAEDQGVCSTSWLFASKVHLETIKCMKGYDHIATSA 480 LYVANCSSKEAKDKCHAASNPLEFLDILEETQFLPAESNLPYSYKAVSNACPEPKSHWQNLWENVKLLEKQYEPNAVSTK 560 GYTAYQSDHFKGNMDAFINLVKSQVMSKGSVIAYVKADELMGYDFNGKNVHSLCGSETPNHAVNIIGYGNYVSAEGVKKS 640 YWLLRNSWGKYWGDDGNFKIDMHGADHCQHNFIHTAAVFNLEMPLVQSAAKKDNHLYSYYLKGSPDLYQNMYYKGFGSQG 720 GNAKGGEKGQVGTPVVSGQEEEEVASDRQDQVREQSHVEASAGPDGLQAGQVDVKAEEEDTKAGQGGEDSAATQDGGSHG 800 PGAVQPLAEQSDTRGVASNLPDGSQLPGSGHEAGQSGHGVAESGSEVPESRPEAPPGEPGAAHSEPQVTESEHGVPPSGS 880 GVPPGGPGVPPSGPEVGRSETGETLSQPAESPPLPNPPSNTAKITQVLHILKHVKQGKVKTRLVTYDSNAAMSADHVCSR 960 AVASDPEKQDECVKFCDDHWNDCKDKISPAYCLTQIRGKKDCFFCYI 1040 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ............................................... 1040 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_003825 10 HLQLDLR|PK 0.073 . PVX_003825 12 QLDLRPK|MI 0.069 . PVX_003825 37 VITALLK|DA 0.071 . PVX_003825 43 KDANGVK|VT 0.078 . PVX_003825 67 SISAETK|TN 0.084 . PVX_003825 72 TKTNDIK|LR 0.056 . PVX_003825 74 TNDIKLR|PI 0.128 . PVX_003825 79 LRPILHK|LL 0.088 . PVX_003825 84 HKLLDAK|EA 0.076 . PVX_003825 92 ADVGTTK|LD 0.062 . PVX_003825 105 FEPNQEK|LK 0.064 . PVX_003825 107 PNQEKLK|NK 0.065 . PVX_003825 109 QEKLKNK|CQ 0.072 . PVX_003825 114 NKCQPGK|EN 0.075 . PVX_003825 121 ENEDTFK|FL 0.070 . PVX_003825 134 EGELTLK|WK 0.054 . PVX_003825 136 ELTLKWK|VY 0.064 . PVX_003825 140 KWKVYNK|SA 0.083 . PVX_003825 148 APADASK|EV 0.082 . PVX_003825 153 SKEVDVR|KY 0.077 . PVX_003825 154 KEVDVRK|YT 0.118 . PVX_003825 158 VRKYTLK|NL 0.080 . PVX_003825 170 ITTVQVR|SS 0.139 . PVX_003825 173 VQVRSSK|VD 0.108 . PVX_003825 184 TLLVESK|SY 0.083 . PVX_003825 190 KSYYVNR|DI 0.181 . PVX_003825 195 NRDIPDK|CD 0.063 . PVX_003825 213 GNVDIEK|CF 0.062 . PVX_003825 232 TTNECFK|YV 0.114 . PVX_003825 241 SSQVTDK|FK 0.085 . PVX_003825 243 QVTDKFK|DI 0.075 . PVX_003825 246 DKFKDIK|VN 0.065 . PVX_003825 266 LAASIGK|IL 0.067 . PVX_003825 273 ILQGVFK|KG 0.071 . PVX_003825 274 LQGVFKK|GE 0.113 . PVX_003825 293 EVDAALK|EE 0.049 . PVX_003825 304 NYCSSMK|EV 0.088 . PVX_003825 332 NLTSILK|NH 0.052 . PVX_003825 339 NHAGETK|ST 0.080 . PVX_003825 345 KSTLQNK|LK 0.067 . PVX_003825 347 TLQNKLK|NP 0.074 . PVX_003825 354 NPAICLK|NA 0.077 . PVX_003825 363 DEWVESK|KG 0.052 . PVX_003825 364 EWVESKK|GL 0.078 . PVX_003825 385 TPPETPK|ED 0.072 . PVX_003825 413 LVSAEEK|NN 0.066 . PVX_003825 433 TEDYCNR|WK 0.080 . PVX_003825 435 DYCNRWK|DD 0.064 . PVX_003825 443 DTSCVSK|IE 0.062 . PVX_003825 461 SWLFASK|VH 0.057 . PVX_003825 468 VHLETIK|CM 0.058 . PVX_003825 471 ETIKCMK|GY 0.074 . PVX_003825 489 VANCSSK|EA 0.080 . PVX_003825 492 CSSKEAK|DK 0.121 . PVX_003825 494 SKEAKDK|CH 0.073 . PVX_003825 525 NLPYSYK|AV 0.098 . PVX_003825 535 NACPEPK|SH 0.093 . PVX_003825 546 NLWENVK|LL 0.061 . PVX_003825 550 NVKLLEK|QY 0.059 . PVX_003825 560 PNAVSTK|GY 0.086 . PVX_003825 571 YQSDHFK|GN 0.092 . PVX_003825 582 AFINLVK|SQ 0.066 . PVX_003825 588 KSQVMSK|GS 0.067 . PVX_003825 596 SVIAYVK|AD 0.061 . PVX_003825 608 GYDFNGK|NV 0.066 . PVX_003825 638 VSAEGVK|KS 0.062 . PVX_003825 639 SAEGVKK|SY 0.139 . PVX_003825 645 KSYWLLR|NS 0.104 . PVX_003825 650 LRNSWGK|YW 0.111 . PVX_003825 659 GDDGNFK|ID 0.063 . PVX_003825 691 LVQSAAK|KD 0.059 . PVX_003825 692 VQSAAKK|DN 0.123 . PVX_003825 702 LYSYYLK|GS 0.068 . PVX_003825 714 YQNMYYK|GF 0.089 . PVX_003825 724 SQGGNAK|GG 0.090 . PVX_003825 728 NAKGGEK|GQ 0.055 . PVX_003825 748 EEVASDR|QD 0.087 . PVX_003825 753 DRQDQVR|EQ 0.156 . PVX_003825 775 AGQVDVK|AE 0.063 . PVX_003825 782 AEEEDTK|AG 0.070 . PVX_003825 814 AEQSDTR|GV 0.138 . PVX_003825 851 SEVPESR|PE 0.077 . PVX_003825 898 SGPEVGR|SE 0.133 . PVX_003825 923 PPSNTAK|IT 0.081 . PVX_003825 932 QVLHILK|HV 0.070 . PVX_003825 935 HILKHVK|QG 0.061 . PVX_003825 938 KHVKQGK|VK 0.064 . PVX_003825 940 VKQGKVK|TR 0.059 . PVX_003825 942 QGKVKTR|LV 0.121 . PVX_003825 960 ADHVCSR|AV 0.113 . PVX_003825 968 VASDPEK|QD 0.069 . PVX_003825 974 KQDECVK|FC 0.065 . PVX_003825 984 DHWNDCK|DK 0.060 . PVX_003825 986 WNDCKDK|IS 0.065 . PVX_003825 997 YCLTQIR|GK 0.089 . PVX_003825 999 LTQIRGK|KD 0.056 . PVX_003825 1000 TQIRGKK|DC 0.272 . ____________________________^_________________

  • Fasta :-

    >PVX_003825 ATGATAGCCCACCTCCAGCTGGACCTCCGCCCAAAGATGATACTTCATTGCCTAGTGCTC CACCACCTAACCCTCGGGAACTCCATTCAAGTGATAACTGCGCTACTGAAGGACGCGAAC GGAGTGAAGGTCACTGGTGCCTGTGGAGCACACTTCGAATTGTCGCTCGTCCCACACATA TCCATCAGCGCCGAAACAAAAACAAACGACATTAAGTTGAGGCCAATATTGCATAAGCTG CTTGACGCAAAGGAGGCAGACGTTGGAACGACCAAACTGGATAATGCAATTCAGTTTGAA CCGAACCAGGAGAAGCTAAAGAATAAGTGCCAGCCTGGGAAAGAAAATGAGGACACTTTT AAATTCCTGGTGTTTATTCACGAAGGGGAGTTGACGCTCAAGTGGAAAGTGTACAACAAA TCTGCCCCTGCAGATGCGAGCAAAGAAGTGGACGTCCGAAAATACACCCTAAAAAACCTG GACCAACCAATCACGACCGTCCAGGTTCGCTCGTCGAAGGTGGACGAGGAGACGCTTCTG GTGGAGAGCAAAAGTTACTACGTGAATAGGGACATCCCGGACAAGTGCGACGTTATAGCG ACCGACTGCTACCTCAACGGGAACGTAGACATTGAAAAATGCTTCCAATGCACCCTGCTG ATGGAGAACAGCGACACTACCAATGAGTGCTTCAAGTATGTCTCCTCCCAGGTAACCGAT AAATTTAAAGACATAAAAGTGAATGCACAGGATGAGGAAGACCCGGCCGAAGTAGAGTTG GCAGCCTCTATTGGGAAGATCCTCCAGGGGGTCTTCAAAAAAGGAGAAGCGGCTCACATT GAGTTGCTCACTTTCGACGAAGTGGATGCAGCTTTGAAAGAGGAACTGCTTAACTATTGC TCCTCGATGAAGGAGGTGGACGCCAGTGGGGTGTTGGACCAATACCAATTGGGCAGTGAA GAGGATATCTTTGCCAACCTAACGAGCATTTTGAAGAACCACGCAGGGGAAACGAAGTCC ACACTGCAGAACAAGCTGAAGAATCCCGCCATATGCTTGAAAAATGCGGACGAATGGGTG GAAAGCAAAAAGGGGCTTCTACTCCCCAGTCTGTCTCATACCAATGGGGAGGTTACCCCC CCTGAGACTCCCAAAGAGGACCACATGAGCGATGCAGATGAGGGCCAGCAGAGTGTCCCC TACGATGCTGTGATCAACCTCGTATCTGCGGAGGAGAAAAACAACCAAAGTTCCCTCATT GAGGACAGCACGTTCTGCACGGAGGACTACTGCAACAGGTGGAAGGACGACACGAGCTGC GTCTCCAAGATTGAGGCGGAAGATCAGGGCGTCTGCTCCACGTCTTGGCTCTTCGCCTCC AAGGTGCACCTAGAGACCATCAAGTGCATGAAGGGGTACGATCACATTGCTACTTCCGCT CTCTACGTGGCTAACTGTTCCAGTAAGGAAGCGAAGGACAAGTGTCACGCCGCGTCAAAC CCGCTGGAATTTTTGGACATCCTGGAGGAGACCCAATTCTTGCCAGCCGAGTCGAACCTC CCCTACTCCTACAAAGCGGTGAGCAACGCCTGTCCGGAGCCCAAGAGCCACTGGCAGAAT CTATGGGAAAACGTGAAGCTCCTAGAAAAGCAGTATGAACCCAACGCGGTTAGCACCAAG GGGTACACCGCCTACCAGAGCGACCACTTCAAAGGCAACATGGACGCATTTATCAATTTG GTAAAGTCGCAAGTGATGAGCAAAGGATCCGTTATCGCCTACGTGAAAGCAGACGAACTC ATGGGCTACGACTTCAATGGGAAGAACGTGCACAGCCTGTGCGGCAGCGAGACGCCTAAC CACGCGGTGAATATAATTGGCTACGGCAACTACGTCAGCGCGGAGGGGGTGAAGAAGTCC TACTGGCTGCTCCGCAACAGTTGGGGCAAATACTGGGGAGATGACGGCAACTTCAAAATC GACATGCATGGAGCGGATCACTGCCAGCACAACTTCATCCACACCGCCGCCGTCTTCAAC CTGGAGATGCCCCTCGTCCAGTCTGCTGCCAAAAAGGACAACCACCTGTACAGCTACTAC CTGAAGGGCTCCCCTGACCTTTACCAAAATATGTACTATAAGGGCTTCGGCTCTCAAGGT GGAAATGCCAAGGGGGGCGAAAAGGGCCAAGTTGGAACCCCCGTGGTTTCTGGACAGGAG GAAGAAGAAGTAGCGAGCGATAGACAAGATCAAGTGAGAGAACAAAGCCATGTAGAAGCG TCAGCTGGACCGGATGGCTTGCAAGCTGGACAAGTGGACGTAAAAGCTGAAGAGGAGGAC ACAAAAGCTGGGCAGGGGGGCGAAGACTCTGCAGCAACACAAGATGGAGGCTCACATGGT CCGGGAGCGGTGCAACCTCTAGCAGAACAATCTGACACGAGAGGTGTAGCAAGTAATTTA CCAGATGGGTCTCAATTACCGGGGAGCGGGCATGAAGCAGGACAGAGCGGGCATGGAGTA GCAGAGAGTGGGTCTGAAGTTCCAGAGAGCAGACCTGAAGCACCACCAGGCGAGCCTGGA GCAGCACATAGCGAACCTCAAGTAACAGAAAGTGAGCATGGAGTACCACCGAGCGGGTCT GGAGTACCACCAGGTGGGCCTGGAGTTCCACCAAGCGGGCCTGAAGTAGGACGGAGCGAA ACTGGAGAAACTTTATCCCAGCCTGCGGAATCGCCACCCCTGCCTAATCCCCCTAGTAAC ACTGCTAAGATAACCCAAGTACTGCACATCTTAAAGCATGTGAAGCAAGGGAAGGTGAAG ACGCGCCTGGTTACCTACGACAGTAATGCGGCGATGAGTGCAGATCACGTCTGCTCACGA GCGGTGGCAAGTGACCCTGAGAAGCAGGACGAGTGCGTGAAGTTCTGTGACGACCACTGG AATGATTGCAAAGATAAAATCTCACCTGCGTATTGCTTAACACAGATCAGGGGAAAAAAA GACTGCTTCTTCTGTTACATATAA
  • Download Fasta

  • Fasta :-

    MIAHLQLDLRPKMILHCLVLHHLTLGNSIQVITALLKDANGVKVTGACGAHFELSLVPHI SISAETKTNDIKLRPILHKLLDAKEADVGTTKLDNAIQFEPNQEKLKNKCQPGKENEDTF KFLVFIHEGELTLKWKVYNKSAPADASKEVDVRKYTLKNLDQPITTVQVRSSKVDEETLL VESKSYYVNRDIPDKCDVIATDCYLNGNVDIEKCFQCTLLMENSDTTNECFKYVSSQVTD KFKDIKVNAQDEEDPAEVELAASIGKILQGVFKKGEAAHIELLTFDEVDAALKEELLNYC SSMKEVDASGVLDQYQLGSEEDIFANLTSILKNHAGETKSTLQNKLKNPAICLKNADEWV ESKKGLLLPSLSHTNGEVTPPETPKEDHMSDADEGQQSVPYDAVINLVSAEEKNNQSSLI EDSTFCTEDYCNRWKDDTSCVSKIEAEDQGVCSTSWLFASKVHLETIKCMKGYDHIATSA LYVANCSSKEAKDKCHAASNPLEFLDILEETQFLPAESNLPYSYKAVSNACPEPKSHWQN LWENVKLLEKQYEPNAVSTKGYTAYQSDHFKGNMDAFINLVKSQVMSKGSVIAYVKADEL MGYDFNGKNVHSLCGSETPNHAVNIIGYGNYVSAEGVKKSYWLLRNSWGKYWGDDGNFKI DMHGADHCQHNFIHTAAVFNLEMPLVQSAAKKDNHLYSYYLKGSPDLYQNMYYKGFGSQG GNAKGGEKGQVGTPVVSGQEEEEVASDRQDQVREQSHVEASAGPDGLQAGQVDVKAEEED TKAGQGGEDSAATQDGGSHGPGAVQPLAEQSDTRGVASNLPDGSQLPGSGHEAGQSGHGV AESGSEVPESRPEAPPGEPGAAHSEPQVTESEHGVPPSGSGVPPGGPGVPPSGPEVGRSE TGETLSQPAESPPLPNPPSNTAKITQVLHILKHVKQGKVKTRLVTYDSNAAMSADHVCSR AVASDPEKQDECVKFCDDHWNDCKDKISPAYCLTQIRGKKDCFFCYI

  • title: active site
  • coordinates: Q449,S455,H621,N646
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_003825383 TTPPETPKED0.992unspPVX_003825383 TTPPETPKED0.992unspPVX_003825383 TTPPETPKED0.992unspPVX_003825442 STSCVSKIEA0.992unspPVX_003825829 SQLPGSGHEA0.99unspPVX_003825850 SEVPESRPEA0.994unspPVX_003825172 SQVRSSKVDE0.998unspPVX_003825319 SYQLGSEEDI0.99unsp
PVX_003825      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India