PVX_003830 | serine-repeat antigen 5 (SERA)

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_003830SP0.0036770.9963040.000019CS pos: 22-23. VKC-TA. Pr: 0.5187
No Results

  • Fasta :-

    >PVX_003830 MKSRLCALLILYMLLNGHSVKCTAAVGQGQGTGVSTDQGVSSQHTANSAGQGIGSSTGST GVPQSRPQSGGGDTGTQGGQQDRASGTSATHVPVVPQNGHVQSNPPPSTSSGGPNGGGGA SITQNVQQANLQAGSDTQVAATPSESFTNPIQVKASLLRDQKGLKITGPCKSYFQVYLVP YLYLNVNAKESEIEMDPMFMKVDDKIKFEKEKHLLNNICEDNKTFKLVVYMYEGELTIKW KVYPPKGETSSDKTLDIRKYKMKDIGQPITSMQVVVMSELNKTIYMESKNFAVMNQIPEK CDAIANECFLSGVLDVQKCYHCTLLLQKKENAEECFKFVSPTIKNRFEDIQTKGEDEENP NVVELEETIDLLLNKIYKNGEGESNEVDQLAIIDSSFQSDLLKYCSLMKEVDTSGSLDNH QLGDAEDVFANLTHLLQSNSDHDVPSLKNKLKSPAICLKNVGHWVGSKTGLVLPTLEYST SQDNAESFDEGEEDTSNSTTTQSADVHPLNVSDKLFCNDEYCDRAKDSSSCIAKIEAGDQ GDCSTSWLFASKVHLEAIKCMKGHDHVASSALYVANCSGKEANDKCHAASNPLEFLNTLE ETKFLAAESDLPYSYKAVNNACPEPKSHWKNLWENVKLLDPTNEPNSVSTKGYTAYQSDH FKGNMDAFIKLVKSEVMKKGSAIAYVKAQGALSYDLNGKKVQSLCGGETPDLAVNIVGYG NYITAEGQKKSYWLLQNSWGKHWGDDGNFKVDMHGPDHCQNNFIHTAAVFNLDVPVVAPA PSSDPEINDYYMKNSPDFFSNFYFNKYEAEKANGLGEEKGPVNNSVLYGQSGEETSALPA SVGDQSGKVVAQTAEGLGAQQGSGGGLGAAAGPTGQEGVGVAAPGGRGTGGEAIAAAAVV VVGGGGSGSAGERGTGVGVAPGVGAAGRSVGEGQQLPAGAASPGTGTQHVGGSVSGGTNS GNGATGNSGPNTQRGQVSQTVNEAAPSTVEKPKSIDSTGVISEGITGVFHFLKNVKKGKV SSNFVTYDNTKAIGDKACSRVQSSDVDKLDDCVKFCEANWNECKGKVSPGYCLTKKKGNN DCFFCFV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_003830.fa Sequence name : PVX_003830 Sequence length : 1087 VALUES OF COMPUTED PARAMETERS Coef20 : 4.450 CoefTot : -3.519 ChDiff : -29 ZoneTo : 72 KR : 4 DE : 1 CleavSite : 68 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.629 1.571 0.338 0.649 MesoH : 0.350 0.413 -0.044 0.363 MuHd_075 : 24.248 18.329 6.795 5.130 MuHd_095 : 20.544 18.366 7.601 4.915 MuHd_100 : 20.060 16.678 7.002 4.088 MuHd_105 : 24.185 17.196 8.132 5.180 Hmax_075 : 8.800 25.200 0.744 4.900 Hmax_095 : 9.888 6.200 1.902 3.946 Hmax_100 : 5.000 5.500 -0.108 3.500 Hmax_105 : 10.100 7.583 1.623 3.370 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7515 0.2485 DFMC : 0.6601 0.3399
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1087 PVX_003830 MKSRLCALLILYMLLNGHSVKCTAAVGQGQGTGVSTDQGVSSQHTANSAGQGIGSSTGSTGVPQSRPQSGGGDTGTQGGQ 80 QDRASGTSATHVPVVPQNGHVQSNPPPSTSSGGPNGGGGASITQNVQQANLQAGSDTQVAATPSESFTNPIQVKASLLRD 160 QKGLKITGPCKSYFQVYLVPYLYLNVNAKESEIEMDPMFMKVDDKIKFEKEKHLLNNICEDNKTFKLVVYMYEGELTIKW 240 KVYPPKGETSSDKTLDIRKYKMKDIGQPITSMQVVVMSELNKTIYMESKNFAVMNQIPEKCDAIANECFLSGVLDVQKCY 320 HCTLLLQKKENAEECFKFVSPTIKNRFEDIQTKGEDEENPNVVELEETIDLLLNKIYKNGEGESNEVDQLAIIDSSFQSD 400 LLKYCSLMKEVDTSGSLDNHQLGDAEDVFANLTHLLQSNSDHDVPSLKNKLKSPAICLKNVGHWVGSKTGLVLPTLEYST 480 SQDNAESFDEGEEDTSNSTTTQSADVHPLNVSDKLFCNDEYCDRAKDSSSCIAKIEAGDQGDCSTSWLFASKVHLEAIKC 560 MKGHDHVASSALYVANCSGKEANDKCHAASNPLEFLNTLEETKFLAAESDLPYSYKAVNNACPEPKSHWKNLWENVKLLD 640 PTNEPNSVSTKGYTAYQSDHFKGNMDAFIKLVKSEVMKKGSAIAYVKAQGALSYDLNGKKVQSLCGGETPDLAVNIVGYG 720 NYITAEGQKKSYWLLQNSWGKHWGDDGNFKVDMHGPDHCQNNFIHTAAVFNLDVPVVAPAPSSDPEINDYYMKNSPDFFS 800 NFYFNKYEAEKANGLGEEKGPVNNSVLYGQSGEETSALPASVGDQSGKVVAQTAEGLGAQQGSGGGLGAAAGPTGQEGVG 880 VAAPGGRGTGGEAIAAAAVVVVGGGGSGSAGERGTGVGVAPGVGAAGRSVGEGQQLPAGAASPGTGTQHVGGSVSGGTNS 960 GNGATGNSGPNTQRGQVSQTVNEAAPSTVEKPKSIDSTGVISEGITGVFHFLKNVKKGKVSSNFVTYDNTKAIGDKACSR 1040 VQSSDVDKLDDCVKFCEANWNECKGKVSPGYCLTKKKGNNDCFFCFV 1120 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................................................................................ 1040 ............................................... 1120 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_003830 2 -----MK|SR 0.073 . PVX_003830 4 ---MKSR|LC 0.076 . PVX_003830 21 LNGHSVK|CT 0.085 . PVX_003830 66 TGVPQSR|PQ 0.141 . PVX_003830 83 QGGQQDR|AS 0.131 . PVX_003830 154 TNPIQVK|AS 0.057 . PVX_003830 159 VKASLLR|DQ 0.092 . PVX_003830 162 SLLRDQK|GL 0.118 . PVX_003830 165 RDQKGLK|IT 0.072 . PVX_003830 171 KITGPCK|SY 0.080 . PVX_003830 189 YLNVNAK|ES 0.080 . PVX_003830 201 MDPMFMK|VD 0.068 . PVX_003830 205 FMKVDDK|IK 0.069 . PVX_003830 207 KVDDKIK|FE 0.059 . PVX_003830 210 DKIKFEK|EK 0.064 . PVX_003830 212 IKFEKEK|HL 0.068 . PVX_003830 223 NICEDNK|TF 0.056 . PVX_003830 226 EDNKTFK|LV 0.076 . PVX_003830 239 EGELTIK|WK 0.054 . PVX_003830 241 ELTIKWK|VY 0.071 . PVX_003830 246 WKVYPPK|GE 0.077 . PVX_003830 253 GETSSDK|TL 0.064 . PVX_003830 258 DKTLDIR|KY 0.070 . PVX_003830 259 KTLDIRK|YK 0.081 . PVX_003830 261 LDIRKYK|MK 0.265 . PVX_003830 263 IRKYKMK|DI 0.164 . PVX_003830 282 VMSELNK|TI 0.070 . PVX_003830 289 TIYMESK|NF 0.066 . PVX_003830 300 MNQIPEK|CD 0.068 . PVX_003830 318 GVLDVQK|CY 0.060 . PVX_003830 328 CTLLLQK|KE 0.056 . PVX_003830 329 TLLLQKK|EN 0.088 . PVX_003830 337 NAEECFK|FV 0.082 . PVX_003830 344 FVSPTIK|NR 0.068 . PVX_003830 346 SPTIKNR|FE 0.137 . PVX_003830 353 FEDIQTK|GE 0.066 . PVX_003830 375 IDLLLNK|IY 0.065 . PVX_003830 378 LLNKIYK|NG 0.067 . PVX_003830 403 FQSDLLK|YC 0.068 . PVX_003830 409 KYCSLMK|EV 0.083 . PVX_003830 448 HDVPSLK|NK 0.059 . PVX_003830 450 VPSLKNK|LK 0.093 . PVX_003830 452 SLKNKLK|SP 0.096 . PVX_003830 459 SPAICLK|NV 0.108 . PVX_003830 468 GHWVGSK|TG 0.053 . PVX_003830 514 PLNVSDK|LF 0.069 . PVX_003830 524 NDEYCDR|AK 0.075 . PVX_003830 526 EYCDRAK|DS 0.078 . PVX_003830 534 SSSCIAK|IE 0.073 . PVX_003830 552 SWLFASK|VH 0.061 . PVX_003830 559 VHLEAIK|CM 0.057 . PVX_003830 562 EAIKCMK|GH 0.072 . PVX_003830 580 VANCSGK|EA 0.085 . PVX_003830 585 GKEANDK|CH 0.064 . PVX_003830 603 NTLEETK|FL 0.061 . PVX_003830 616 DLPYSYK|AV 0.083 . PVX_003830 626 NACPEPK|SH 0.090 . PVX_003830 630 EPKSHWK|NL 0.072 . PVX_003830 637 NLWENVK|LL 0.061 . PVX_003830 651 PNSVSTK|GY 0.098 . PVX_003830 662 YQSDHFK|GN 0.089 . PVX_003830 670 NMDAFIK|LV 0.065 . PVX_003830 673 AFIKLVK|SE 0.065 . PVX_003830 678 VKSEVMK|KG 0.077 . PVX_003830 679 KSEVMKK|GS 0.104 . PVX_003830 687 SAIAYVK|AQ 0.064 . PVX_003830 699 SYDLNGK|KV 0.065 . PVX_003830 700 YDLNGKK|VQ 0.074 . PVX_003830 729 ITAEGQK|KS 0.060 . PVX_003830 730 TAEGQKK|SY 0.153 . PVX_003830 741 LQNSWGK|HW 0.087 . PVX_003830 750 GDDGNFK|VD 0.065 . PVX_003830 793 INDYYMK|NS 0.062 . PVX_003830 806 SNFYFNK|YE 0.070 . PVX_003830 811 NKYEAEK|AN 0.074 . PVX_003830 819 NGLGEEK|GP 0.052 . PVX_003830 848 VGDQSGK|VV 0.071 . PVX_003830 887 VAAPGGR|GT 0.126 . PVX_003830 913 SGSAGER|GT 0.139 . PVX_003830 928 GVGAAGR|SV 0.384 . PVX_003830 974 SGPNTQR|GQ 0.080 . PVX_003830 991 APSTVEK|PK 0.082 . PVX_003830 993 STVEKPK|SI 0.114 . PVX_003830 1013 GVFHFLK|NV 0.087 . PVX_003830 1016 HFLKNVK|KG 0.054 . PVX_003830 1017 FLKNVKK|GK 0.100 . PVX_003830 1019 KNVKKGK|VS 0.070 . PVX_003830 1031 VTYDNTK|AI 0.074 . PVX_003830 1036 TKAIGDK|AC 0.082 . PVX_003830 1040 GDKACSR|VQ 0.079 . PVX_003830 1048 QSSDVDK|LD 0.075 . PVX_003830 1054 KLDDCVK|FC 0.066 . PVX_003830 1064 ANWNECK|GK 0.060 . PVX_003830 1066 WNECKGK|VS 0.068 . PVX_003830 1075 PGYCLTK|KK 0.065 . PVX_003830 1076 GYCLTKK|KG 0.071 . PVX_003830 1077 YCLTKKK|GN 0.138 . ____________________________^_________________

  • Fasta :-

    >PVX_003830 ATGAAGTCTCGTTTGTGTGCCCTCTTGATATTGTATATGTTGCTGAATGGGCACTCAGTG AAGTGCACGGCGGCTGTGGGTCAGGGACAGGGAACTGGAGTATCAACTGATCAAGGTGTC TCGTCACAGCACACTGCTAACTCTGCAGGTCAAGGAATTGGCTCTTCCACTGGCTCTACT GGTGTCCCTCAATCTAGACCACAAAGTGGGGGCGGAGATACAGGAACCCAAGGAGGCCAA CAAGACAGAGCAAGTGGAACTAGTGCAACACATGTACCTGTAGTACCACAGAATGGGCAT GTTCAGTCTAATCCACCACCTTCAACATCAAGTGGTGGTCCAAATGGAGGCGGTGGAGCT TCCATTACTCAAAATGTTCAACAAGCGAATCTTCAAGCAGGTTCCGATACCCAAGTAGCT GCCACCCCCTCCGAGAGCTTCACAAATCCCATTCAGGTAAAAGCGTCGTTGCTGAGGGAC CAGAAGGGGCTCAAGATCACAGGTCCTTGCAAGTCCTACTTTCAAGTGTATCTCGTGCCC TACCTCTACTTGAACGTTAACGCAAAGGAGAGCGAAATCGAAATGGATCCCATGTTCATG AAGGTGGACGACAAGATCAAATTTGAGAAGGAGAAACACCTCCTGAACAACATCTGTGAA GACAATAAAACGTTTAAGCTAGTCGTGTACATGTATGAAGGAGAGCTGACCATCAAGTGG AAGGTCTATCCTCCCAAGGGGGAGACAAGCTCCGACAAAACGCTGGACATTAGGAAGTAC AAAATGAAGGACATCGGCCAGCCTATCACCTCCATGCAGGTGGTGGTGATGAGCGAACTG AATAAGACCATCTACATGGAGAGCAAAAACTTCGCCGTGATGAACCAAATTCCAGAGAAG TGTGATGCGATTGCCAACGAGTGCTTCCTTAGCGGTGTGCTGGACGTCCAGAAGTGCTAC CATTGTACTCTGTTGCTGCAGAAGAAGGAAAACGCTGAGGAATGCTTCAAATTTGTCTCC CCCACGATTAAAAACCGATTTGAAGATATACAGACGAAGGGAGAAGACGAGGAGAACCCA AATGTAGTGGAGCTGGAAGAAACTATTGATCTCCTTTTAAATAAAATTTACAAAAATGGG GAAGGAGAAAGTAACGAGGTGGATCAGCTAGCCATTATAGACTCCTCCTTTCAGTCCGAC CTGTTGAAGTACTGCTCATTAATGAAGGAGGTAGACACCAGCGGGTCTCTAGACAACCAC CAGCTGGGCGACGCCGAGGATGTATTCGCCAATTTGACACACCTCTTGCAGAGTAACAGC GACCATGATGTGCCATCCTTAAAGAACAAACTAAAGAGTCCCGCCATATGCTTAAAGAAT GTAGGTCACTGGGTTGGAAGCAAAACTGGATTGGTACTTCCCACCCTGGAGTATAGCACC TCGCAGGATAACGCGGAATCGTTTGATGAAGGCGAGGAAGATACTTCCAATTCGACTACC ACACAAAGTGCTGATGTGCATCCCTTAAACGTCTCAGATAAGCTCTTCTGCAATGATGAA TACTGCGATAGGGCGAAGGACAGCAGTAGCTGCATTGCCAAAATTGAGGCAGGGGACCAG GGCGACTGCTCTACTTCTTGGTTGTTCGCCTCCAAGGTGCATCTGGAAGCCATCAAGTGC ATGAAGGGGCACGACCACGTCGCAAGTTCGGCCCTCTACGTGGCTAACTGTTCCGGTAAA GAAGCGAATGACAAATGTCACGCGGCTTCTAATCCGCTAGAATTTTTGAACACCCTGGAG GAGACCAAATTTTTGGCAGCCGAGTCTGACCTACCATACTCCTACAAAGCGGTGAATAAC GCGTGCCCCGAGCCGAAGAGCCACTGGAAAAACCTTTGGGAAAACGTGAAACTTCTAGAC CCCACGAATGAACCCAACTCGGTAAGTACCAAGGGGTACACAGCATACCAGAGCGACCAC TTCAAAGGCAACATGGACGCGTTTATTAAGCTTGTAAAATCCGAAGTGATGAAAAAGGGA TCTGCAATCGCCTATGTGAAGGCACAAGGAGCACTCAGCTACGACCTGAACGGGAAGAAG GTGCAAAGTCTCTGTGGAGGTGAAACGCCCGACCTCGCTGTCAACATAGTGGGTTATGGA AACTACATCACCGCTGAAGGGCAGAAGAAATCCTACTGGCTGCTGCAAAACAGCTGGGGA AAGCACTGGGGAGATGACGGCAACTTCAAGGTCGACATGCATGGACCGGATCACTGCCAG AATAACTTCATCCACACCGCTGCTGTCTTCAATCTGGACGTCCCCGTGGTCGCTCCCGCA CCGAGTAGCGACCCAGAAATAAATGACTACTATATGAAGAACTCCCCCGATTTCTTCAGT AACTTTTATTTTAATAAATACGAGGCGGAGAAGGCCAATGGGTTAGGCGAAGAAAAGGGA CCTGTCAATAACTCAGTGCTGTATGGTCAATCGGGGGAAGAAACATCAGCGTTACCGGCA TCGGTAGGTGATCAATCTGGCAAAGTAGTAGCACAAACAGCCGAAGGATTGGGCGCTCAA CAAGGATCAGGAGGAGGATTAGGAGCAGCAGCAGGGCCAACAGGACAAGAAGGAGTAGGA GTAGCAGCACCAGGGGGAAGAGGAACAGGAGGAGAAGCAATAGCAGCAGCAGCAGTAGTA GTAGTAGGAGGAGGAGGATCAGGATCAGCAGGAGAAAGAGGAACAGGAGTAGGAGTAGCA CCAGGAGTAGGAGCAGCAGGAAGATCAGTAGGAGAAGGACAACAGTTACCAGCAGGGGCT GCATCACCTGGAACAGGAACTCAACATGTCGGAGGGTCTGTCTCTGGAGGCACAAATTCA GGGAATGGCGCAACAGGAAATAGCGGTCCAAATACGCAACGTGGACAGGTCAGTCAAACC GTTAATGAAGCCGCTCCCTCCACCGTGGAGAAACCTAAATCAATCGACTCAACGGGCGTA ATCAGTGAAGGCATAACAGGAGTATTCCACTTTTTGAAGAATGTAAAAAAAGGAAAAGTG TCTAGCAACTTTGTGACGTACGATAATACGAAGGCCATCGGCGATAAGGCATGTTCCAGA GTGCAGTCCTCAGACGTAGATAAGCTGGATGACTGTGTTAAATTTTGTGAGGCGAACTGG AATGAATGCAAGGGTAAGGTATCGCCTGGTTACTGTCTAACGAAGAAGAAGGGAAACAAC GACTGCTTCTTCTGCTTTGTGTAG
  • Download Fasta

  • Fasta :-

    MKSRLCALLILYMLLNGHSVKCTAAVGQGQGTGVSTDQGVSSQHTANSAGQGIGSSTGST GVPQSRPQSGGGDTGTQGGQQDRASGTSATHVPVVPQNGHVQSNPPPSTSSGGPNGGGGA SITQNVQQANLQAGSDTQVAATPSESFTNPIQVKASLLRDQKGLKITGPCKSYFQVYLVP YLYLNVNAKESEIEMDPMFMKVDDKIKFEKEKHLLNNICEDNKTFKLVVYMYEGELTIKW KVYPPKGETSSDKTLDIRKYKMKDIGQPITSMQVVVMSELNKTIYMESKNFAVMNQIPEK CDAIANECFLSGVLDVQKCYHCTLLLQKKENAEECFKFVSPTIKNRFEDIQTKGEDEENP NVVELEETIDLLLNKIYKNGEGESNEVDQLAIIDSSFQSDLLKYCSLMKEVDTSGSLDNH QLGDAEDVFANLTHLLQSNSDHDVPSLKNKLKSPAICLKNVGHWVGSKTGLVLPTLEYST SQDNAESFDEGEEDTSNSTTTQSADVHPLNVSDKLFCNDEYCDRAKDSSSCIAKIEAGDQ GDCSTSWLFASKVHLEAIKCMKGHDHVASSALYVANCSGKEANDKCHAASNPLEFLNTLE ETKFLAAESDLPYSYKAVNNACPEPKSHWKNLWENVKLLDPTNEPNSVSTKGYTAYQSDH FKGNMDAFIKLVKSEVMKKGSAIAYVKAQGALSYDLNGKKVQSLCGGETPDLAVNIVGYG NYITAEGQKKSYWLLQNSWGKHWGDDGNFKVDMHGPDHCQNNFIHTAAVFNLDVPVVAPA PSSDPEINDYYMKNSPDFFSNFYFNKYEAEKANGLGEEKGPVNNSVLYGQSGEETSALPA SVGDQSGKVVAQTAEGLGAQQGSGGGLGAAAGPTGQEGVGVAAPGGRGTGGEAIAAAAVV VVGGGGSGSAGERGTGVGVAPGVGAAGRSVGEGQQLPAGAASPGTGTQHVGGSVSGGTNS GNGATGNSGPNTQRGQVSQTVNEAAPSTVEKPKSIDSTGVISEGITGVFHFLKNVKKGKV SSNFVTYDNTKAIGDKACSRVQSSDVDKLDDCVKFCEANWNECKGKVSPGYCLTKKKGNN DCFFCFV

  • title: active site
  • coordinates: Q540,S546,L712,N737
IDSitePositionGscoreIscore
PVX_003830T1090.5470.451
IDSitePositionGscoreIscore
PVX_003830T1090.5470.451
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_003830438 SHLLQSNSDH0.991unspPVX_003830841 SALPASVGDQ0.995unsp
PVX_003830      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India