PVX_003840 | serine-repeat antigen 3 (SERA)

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_003840SP0.0012790.9987210.000001CS pos: 22-23. ARC-AP. Pr: 0.8837
No Results

  • Fasta :-

    >PVX_003840 MKSRICALLLIGLVFVNEGARCAPPAGEGTAVTVQAGQSPGSAGGGDGGGGGGGSSAGSS HSNSGGGQGSDAAAQRPAAPQPPPTPPAEGSSSPPAGNQNPSTSGSQPQNVSSVAAPVPP VEATPPPSVTNPFKVKSSLLKDQKGLKITGPCESYFQVYLVPYLYMNVNATSSEIEMEPM FMKVDDKIKFEKEKHLLHNICAADKTFKLVLYMYDGVLTIKWKVYPLNGDKTADRTLDIR KYKMKDIGQPITSMQVVVMTEQNKTVYVESKNFSIMNEIPEKCDAIANECFMSGVLDVQK CYHCSLLLQKKESAQECFKFVSPKIKNSFDEIQAKGEDEENPNEEELQKTIDNIFVKVYK KGENLYKEVDQLAIIDSSFKSELLKYCSLMKEVDTSGALDNHQLGNAEDVFAHITTMLHS NSDLDVFSLKSKLKNAALCLKNGDEWVGSKTGLVLPNLSPQNFEDSPTQTFDGGDEQAAL EAGEDGVVDLTSLQSVDVSPFLVTDKLFCNDDYCDRAKDTSSCVAKIEVQDQGDCATSWL FASKVHLETIKCVKGYDHVGASALYVANCSGTEANDKCHAASNPLEFLNTLEETKFLAAE SDLPYSYKAVNNACPEPKSHWKNLWENVKLLDPTNEPNSVSTKGYTAYQSDHFKGNMDAF IKLVKSEVMKKGSAIAYVKAQGALSYDLNGKKVLSLCGGETPDLAVNIVGYGNYISAEGV KKPYWLLQNSWGKHWGDKGTFKVDMHGPPGCQHNFIHTAAVFNLDIPVVVPAPNSDPEIN NYYLKNSPDFFSNFYLNKYEAGSDGNSDDAKSVSGNSTVQGPDGPAGPSGPDGNVGQKGA AARTGEPSTAVERSQTADGVTTPPGGGGANGGRQGAEASVQERNAVDSGSPQAVTRPTPP PERVASGLASVQHSGDTTLPQSTTSSVTQNPPVATRPAPQTTHQTAPAQPATPREPLSSL KGSTGVNVTEVKEALHFLKSVKNGKVKSNFVAYVNADAMGDEKVCSRAFSTDADKQTECI EFCEKNWDACKGKVSPGYCLTKKRGSNDCFFCFV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_003840.fa Sequence name : PVX_003840 Sequence length : 1054 VALUES OF COMPUTED PARAMETERS Coef20 : 4.363 CoefTot : 0.379 ChDiff : -24 ZoneTo : 17 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.812 1.718 0.154 0.591 MesoH : 0.061 0.131 -0.148 0.248 MuHd_075 : 25.636 19.120 7.894 5.313 MuHd_095 : 9.614 6.732 2.115 1.964 MuHd_100 : 11.907 8.059 2.902 2.703 MuHd_105 : 12.410 6.022 4.195 2.482 Hmax_075 : 21.467 24.500 5.756 7.630 Hmax_095 : 11.987 15.838 1.972 5.373 Hmax_100 : 19.400 20.600 3.661 7.020 Hmax_105 : 8.800 14.800 2.289 4.880 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9817 0.0183 DFMC : 0.9779 0.0221
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1054 PVX_003840 MKSRICALLLIGLVFVNEGARCAPPAGEGTAVTVQAGQSPGSAGGGDGGGGGGGSSAGSSHSNSGGGQGSDAAAQRPAAP 80 QPPPTPPAEGSSSPPAGNQNPSTSGSQPQNVSSVAAPVPPVEATPPPSVTNPFKVKSSLLKDQKGLKITGPCESYFQVYL 160 VPYLYMNVNATSSEIEMEPMFMKVDDKIKFEKEKHLLHNICAADKTFKLVLYMYDGVLTIKWKVYPLNGDKTADRTLDIR 240 KYKMKDIGQPITSMQVVVMTEQNKTVYVESKNFSIMNEIPEKCDAIANECFMSGVLDVQKCYHCSLLLQKKESAQECFKF 320 VSPKIKNSFDEIQAKGEDEENPNEEELQKTIDNIFVKVYKKGENLYKEVDQLAIIDSSFKSELLKYCSLMKEVDTSGALD 400 NHQLGNAEDVFAHITTMLHSNSDLDVFSLKSKLKNAALCLKNGDEWVGSKTGLVLPNLSPQNFEDSPTQTFDGGDEQAAL 480 EAGEDGVVDLTSLQSVDVSPFLVTDKLFCNDDYCDRAKDTSSCVAKIEVQDQGDCATSWLFASKVHLETIKCVKGYDHVG 560 ASALYVANCSGTEANDKCHAASNPLEFLNTLEETKFLAAESDLPYSYKAVNNACPEPKSHWKNLWENVKLLDPTNEPNSV 640 STKGYTAYQSDHFKGNMDAFIKLVKSEVMKKGSAIAYVKAQGALSYDLNGKKVLSLCGGETPDLAVNIVGYGNYISAEGV 720 KKPYWLLQNSWGKHWGDKGTFKVDMHGPPGCQHNFIHTAAVFNLDIPVVVPAPNSDPEINNYYLKNSPDFFSNFYLNKYE 800 AGSDGNSDDAKSVSGNSTVQGPDGPAGPSGPDGNVGQKGAAARTGEPSTAVERSQTADGVTTPPGGGGANGGRQGAEASV 880 QERNAVDSGSPQAVTRPTPPPERVASGLASVQHSGDTTLPQSTTSSVTQNPPVATRPAPQTTHQTAPAQPATPREPLSSL 960 KGSTGVNVTEVKEALHFLKSVKNGKVKSNFVAYVNADAMGDEKVCSRAFSTDADKQTECIEFCEKNWDACKGKVSPGYCL 1040 TKKRGSNDCFFCFV 1120 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................................................................................ 1040 .............. 1120 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_003840 2 -----MK|SR 0.078 . PVX_003840 4 ---MKSR|IC 0.084 . PVX_003840 21 FVNEGAR|CA 0.108 . PVX_003840 76 SDAAAQR|PA 0.130 . PVX_003840 134 SVTNPFK|VK 0.068 . PVX_003840 136 TNPFKVK|SS 0.077 . PVX_003840 141 VKSSLLK|DQ 0.071 . PVX_003840 144 SLLKDQK|GL 0.067 . PVX_003840 147 KDQKGLK|IT 0.079 . PVX_003840 183 MEPMFMK|VD 0.066 . PVX_003840 187 FMKVDDK|IK 0.069 . PVX_003840 189 KVDDKIK|FE 0.061 . PVX_003840 192 DKIKFEK|EK 0.063 . PVX_003840 194 IKFEKEK|HL 0.073 . PVX_003840 205 NICAADK|TF 0.059 . PVX_003840 208 AADKTFK|LV 0.068 . PVX_003840 221 DGVLTIK|WK 0.056 . PVX_003840 223 VLTIKWK|VY 0.058 . PVX_003840 231 YPLNGDK|TA 0.062 . PVX_003840 235 GDKTADR|TL 0.083 . PVX_003840 240 DRTLDIR|KY 0.072 . PVX_003840 241 RTLDIRK|YK 0.086 . PVX_003840 243 LDIRKYK|MK 0.272 . PVX_003840 245 IRKYKMK|DI 0.164 . PVX_003840 264 VMTEQNK|TV 0.068 . PVX_003840 271 TVYVESK|NF 0.076 . PVX_003840 282 MNEIPEK|CD 0.065 . PVX_003840 300 GVLDVQK|CY 0.063 . PVX_003840 310 CSLLLQK|KE 0.063 . PVX_003840 311 SLLLQKK|ES 0.093 . PVX_003840 319 SAQECFK|FV 0.106 . PVX_003840 324 FKFVSPK|IK 0.066 . PVX_003840 326 FVSPKIK|NS 0.088 . PVX_003840 335 FDEIQAK|GE 0.075 . PVX_003840 349 NEEELQK|TI 0.069 . PVX_003840 357 IDNIFVK|VY 0.077 . PVX_003840 360 IFVKVYK|KG 0.061 . PVX_003840 361 FVKVYKK|GE 0.074 . PVX_003840 367 KGENLYK|EV 0.077 . PVX_003840 380 IIDSSFK|SE 0.062 . PVX_003840 385 FKSELLK|YC 0.070 . PVX_003840 391 KYCSLMK|EV 0.083 . PVX_003840 430 LDVFSLK|SK 0.069 . PVX_003840 432 VFSLKSK|LK 0.070 . PVX_003840 434 SLKSKLK|NA 0.073 . PVX_003840 441 NAALCLK|NG 0.060 . PVX_003840 450 DEWVGSK|TG 0.052 . PVX_003840 506 PFLVTDK|LF 0.054 . PVX_003840 516 NDDYCDR|AK 0.079 . PVX_003840 518 DYCDRAK|DT 0.080 . PVX_003840 526 TSSCVAK|IE 0.085 . PVX_003840 544 SWLFASK|VH 0.057 . PVX_003840 551 VHLETIK|CV 0.069 . PVX_003840 554 ETIKCVK|GY 0.074 . PVX_003840 577 GTEANDK|CH 0.060 . PVX_003840 595 NTLEETK|FL 0.061 . PVX_003840 608 DLPYSYK|AV 0.083 . PVX_003840 618 NACPEPK|SH 0.090 . PVX_003840 622 EPKSHWK|NL 0.072 . PVX_003840 629 NLWENVK|LL 0.061 . PVX_003840 643 PNSVSTK|GY 0.098 . PVX_003840 654 YQSDHFK|GN 0.089 . PVX_003840 662 NMDAFIK|LV 0.065 . PVX_003840 665 AFIKLVK|SE 0.065 . PVX_003840 670 VKSEVMK|KG 0.077 . PVX_003840 671 KSEVMKK|GS 0.104 . PVX_003840 679 SAIAYVK|AQ 0.064 . PVX_003840 691 SYDLNGK|KV 0.061 . PVX_003840 692 YDLNGKK|VL 0.080 . PVX_003840 721 ISAEGVK|KP 0.061 . PVX_003840 722 SAEGVKK|PY 0.100 . PVX_003840 733 LQNSWGK|HW 0.096 . PVX_003840 738 GKHWGDK|GT 0.095 . PVX_003840 742 GDKGTFK|VD 0.070 . PVX_003840 785 INNYYLK|NS 0.066 . PVX_003840 798 SNFYLNK|YE 0.067 . PVX_003840 811 GNSDDAK|SV 0.194 . PVX_003840 838 DGNVGQK|GA 0.071 . PVX_003840 843 QKGAAAR|TG 0.121 . PVX_003840 853 PSTAVER|SQ 0.113 . PVX_003840 873 GGANGGR|QG 0.083 . PVX_003840 883 EASVQER|NA 0.137 . PVX_003840 896 SPQAVTR|PT 0.122 . PVX_003840 903 PTPPPER|VA 0.082 . PVX_003840 936 NPPVATR|PA 0.115 . PVX_003840 954 AQPATPR|EP 0.084 . PVX_003840 961 EPLSSLK|GS 0.069 . PVX_003840 972 VNVTEVK|EA 0.065 . PVX_003840 979 EALHFLK|SV 0.100 . PVX_003840 982 HFLKSVK|NG 0.056 . PVX_003840 985 KSVKNGK|VK 0.062 . PVX_003840 987 VKNGKVK|SN 0.098 . PVX_003840 1003 DAMGDEK|VC 0.061 . PVX_003840 1007 DEKVCSR|AF 0.087 . PVX_003840 1015 FSTDADK|QT 0.073 . PVX_003840 1025 CIEFCEK|NW 0.060 . PVX_003840 1031 KNWDACK|GK 0.059 . PVX_003840 1033 WDACKGK|VS 0.066 . PVX_003840 1042 PGYCLTK|KR 0.062 . PVX_003840 1043 GYCLTKK|RG 0.075 . PVX_003840 1044 YCLTKKR|GS 0.256 . ____________________________^_________________

  • Fasta :-

    >PVX_003840 ATGAAGTCCCGCATCTGTGCCCTTCTGCTAATAGGTCTTGTGTTTGTAAATGAGGGAGCA CGATGCGCCCCACCGGCGGGTGAGGGAACTGCCGTAACTGTTCAAGCAGGTCAATCCCCA GGTTCAGCCGGCGGAGGAGATGGAGGCGGTGGAGGAGGAGGAAGTTCTGCAGGTTCTTCC CATAGTAATTCAGGTGGGGGACAAGGCAGCGATGCGGCAGCACAAAGACCAGCGGCACCA CAACCACCACCAACACCTCCTGCAGAAGGGTCATCATCACCTCCAGCGGGTAATCAGAAT CCATCTACTTCTGGTTCTCAACCACAAAATGTTTCCAGTGTTGCTGCTCCAGTTCCCCCA GTGGAAGCTACTCCCCCCCCGAGTGTGACGAACCCATTTAAGGTGAAGTCATCTTTGCTG AAGGACCAGAAGGGGCTGAAAATCACAGGTCCCTGCGAATCCTACTTTCAAGTGTACCTC GTGCCCTACCTCTACATGAACGTCAACGCGACGAGCAGCGAAATTGAGATGGAGCCCATG TTCATGAAGGTGGACGACAAGATTAAATTTGAGAAGGAGAAGCATCTCCTCCATAACATC TGTGCTGCGGATAAAACGTTTAAGCTTGTCTTGTACATGTACGATGGGGTGCTGACCATC AAGTGGAAGGTCTACCCTCTCAACGGGGATAAAACTGCCGACAGAACGCTGGACATTAGG AAGTACAAAATGAAGGACATCGGCCAACCCATCACCTCCATGCAGGTGGTGGTCATGACC GAACAGAACAAGACCGTCTACGTGGAGAGTAAGAACTTCTCCATCATGAACGAAATTCCA GAGAAGTGCGACGCGATTGCCAACGAGTGCTTCATGAGCGGTGTGCTGGATGTGCAGAAG TGCTACCACTGCTCCTTACTGCTCCAGAAAAAGGAGAGCGCTCAGGAATGCTTCAAATTT GTCTCCCCCAAGATTAAAAACAGCTTTGACGAGATACAAGCGAAGGGAGAAGACGAGGAA AACCCCAACGAAGAGGAACTGCAAAAAACAATTGATAACATATTCGTCAAGGTGTATAAG AAGGGGGAAAATCTTTACAAGGAGGTGGACCAGCTAGCCATTATAGACTCCTCCTTTAAG TCCGAGCTGCTGAAGTACTGCTCATTAATGAAGGAGGTAGATACCAGCGGTGCGTTGGAC AACCACCAGCTGGGCAACGCCGAGGATGTGTTCGCCCACATAACGACCATGCTCCACAGC AACAGCGACCTTGATGTGTTTTCACTAAAGAGTAAGCTGAAAAATGCGGCCTTATGTTTG AAGAATGGGGACGAATGGGTTGGAAGCAAGACCGGGCTGGTACTCCCCAATTTGTCTCCT CAAAATTTTGAGGACAGTCCCACCCAAACTTTTGACGGAGGAGATGAACAGGCAGCTTTG GAGGCCGGGGAGGATGGCGTCGTCGATTTGACCTCCCTCCAAAGTGTGGACGTCAGTCCA TTCCTCGTCACAGATAAGCTCTTCTGCAATGATGACTACTGCGATAGGGCGAAGGACACC AGCAGTTGTGTGGCAAAAATTGAGGTGCAGGACCAGGGCGACTGCGCTACCTCTTGGCTC TTCGCTTCTAAGGTGCACCTAGAAACGATCAAGTGTGTGAAGGGATACGACCACGTCGGT GCATCTGCTCTCTACGTGGCTAACTGTTCCGGTACAGAAGCGAATGACAAGTGTCACGCG GCTTCTAATCCGCTAGAATTTTTGAACACCCTGGAGGAGACCAAATTTTTGGCAGCCGAG TCTGACCTACCATACTCCTACAAAGCGGTGAATAACGCGTGCCCCGAGCCGAAGAGCCAC TGGAAAAACCTTTGGGAAAACGTGAAACTTCTAGACCCCACGAATGAACCCAACTCGGTA AGTACCAAGGGGTACACAGCATACCAGAGCGACCACTTCAAAGGCAACATGGACGCGTTT ATTAAGCTTGTAAAATCCGAAGTGATGAAAAAGGGATCTGCAATCGCCTATGTGAAGGCA CAAGGAGCACTCAGCTACGACCTGAACGGGAAGAAGGTCCTCTCTCTGTGTGGAGGTGAA ACGCCCGACCTCGCTGTCAACATAGTGGGTTATGGCAACTATATCAGTGCGGAGGGGGTG AAGAAGCCCTACTGGTTGCTGCAAAACAGCTGGGGTAAACACTGGGGGGACAAGGGAACT TTTAAGGTCGATATGCATGGCCCGCCTGGATGCCAGCACAACTTCATCCACACCGCTGCC GTCTTCAATCTGGACATCCCCGTGGTCGTTCCCGCACCGAACAGCGACCCAGAAATAAAT AATTACTACTTGAAGAACTCTCCCGATTTTTTCAGCAACTTTTATTTGAATAAATACGAG GCAGGAAGTGACGGCAATTCTGACGATGCAAAGAGTGTGAGCGGCAATTCGACGGTTCAG GGACCAGATGGACCAGCTGGTCCATCTGGGCCAGATGGGAATGTTGGGCAAAAAGGGGCA GCTGCGCGAACTGGAGAACCATCTACGGCCGTAGAACGATCGCAAACTGCAGATGGTGTA ACAACTCCACCAGGAGGAGGAGGTGCGAATGGAGGACGCCAAGGGGCTGAGGCATCGGTT CAAGAAAGAAACGCAGTTGATTCAGGCTCACCACAAGCTGTTACGAGGCCTACTCCACCC CCTGAGAGAGTTGCATCTGGATTGGCATCCGTACAACACAGTGGAGATACGACACTACCA CAATCGACTACATCATCAGTAACGCAAAATCCACCCGTGGCTACGCGACCTGCACCGCAA ACGACTCATCAAACGGCGCCAGCACAACCAGCAACCCCCAGGGAGCCCCTCTCATCGCTG AAGGGTAGCACTGGAGTTAACGTGACTGAGGTAAAGGAAGCGCTGCATTTCTTGAAGAGC GTAAAGAATGGAAAAGTAAAAAGCAACTTCGTGGCGTACGTAAACGCAGATGCCATGGGC GATGAGAAAGTTTGCTCCAGAGCTTTCTCCACAGATGCCGATAAACAAACGGAGTGCATC GAATTTTGTGAAAAGAATTGGGATGCATGCAAAGGTAAAGTGTCTCCTGGGTACTGCTTA ACGAAGAAGAGAGGAAGCAACGACTGCTTCTTCTGCTTCGTGTAA
  • Download Fasta

  • Fasta :-

    MKSRICALLLIGLVFVNEGARCAPPAGEGTAVTVQAGQSPGSAGGGDGGGGGGGSSAGSS HSNSGGGQGSDAAAQRPAAPQPPPTPPAEGSSSPPAGNQNPSTSGSQPQNVSSVAAPVPP VEATPPPSVTNPFKVKSSLLKDQKGLKITGPCESYFQVYLVPYLYMNVNATSSEIEMEPM FMKVDDKIKFEKEKHLLHNICAADKTFKLVLYMYDGVLTIKWKVYPLNGDKTADRTLDIR KYKMKDIGQPITSMQVVVMTEQNKTVYVESKNFSIMNEIPEKCDAIANECFMSGVLDVQK CYHCSLLLQKKESAQECFKFVSPKIKNSFDEIQAKGEDEENPNEEELQKTIDNIFVKVYK KGENLYKEVDQLAIIDSSFKSELLKYCSLMKEVDTSGALDNHQLGNAEDVFAHITTMLHS NSDLDVFSLKSKLKNAALCLKNGDEWVGSKTGLVLPNLSPQNFEDSPTQTFDGGDEQAAL EAGEDGVVDLTSLQSVDVSPFLVTDKLFCNDDYCDRAKDTSSCVAKIEVQDQGDCATSWL FASKVHLETIKCVKGYDHVGASALYVANCSGTEANDKCHAASNPLEFLNTLEETKFLAAE SDLPYSYKAVNNACPEPKSHWKNLWENVKLLDPTNEPNSVSTKGYTAYQSDHFKGNMDAF IKLVKSEVMKKGSAIAYVKAQGALSYDLNGKKVLSLCGGETPDLAVNIVGYGNYISAEGV KKPYWLLQNSWGKHWGDKGTFKVDMHGPPGCQHNFIHTAAVFNLDIPVVVPAPNSDPEIN NYYLKNSPDFFSNFYLNKYEAGSDGNSDDAKSVSGNSTVQGPDGPAGPSGPDGNVGQKGA AARTGEPSTAVERSQTADGVTTPPGGGGANGGRQGAEASVQERNAVDSGSPQAVTRPTPP PERVASGLASVQHSGDTTLPQSTTSSVTQNPPVATRPAPQTTHQTAPAQPATPREPLSSL KGSTGVNVTEVKEALHFLKSVKNGKVKSNFVAYVNADAMGDEKVCSRAFSTDADKQTECI EFCEKNWDACKGKVSPGYCLTKKRGSNDCFFCFV

    No Results
  • title: active site
  • coordinates: Q532,S538,L704,N729
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
PVX_003840T850.6650.534PVX_003840S920.6250.286PVX_003840S910.6230.307PVX_003840S930.6210.100PVX_003840T1030.6030.098PVX_003840T1240.5740.672PVX_003840S1060.5190.032PVX_003840S1130.5090.051PVX_003840S1020.5040.110
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
PVX_003840T850.6650.534PVX_003840S920.6250.286PVX_003840S910.6230.307PVX_003840S930.6210.100PVX_003840T1030.6030.098PVX_003840T1240.5740.672PVX_003840S1060.5190.032PVX_003840S1130.5090.051PVX_003840S1020.5040.110
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_003840420 STMLHSNSDL0.994unspPVX_0038401046 SKKRGSNDCF0.993unsp
PVX_003840      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India