PVX_080095 | mitochondrial processing peptidase alpha subunit, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_080095OTHER0.9888750.0000280.011096
No Results

  • Fasta :-

    >PVX_080095 MNGHVQKLKVVLCRNKPGKQLYSSEALKVKRNPNLEKLYSGEKQNLAKVTFKKEKIEDII KEVKFDYYYFNEGKKNIYRDIPLNIAVVKESELPPFQQVDEKLHFSVLENDLRIISTNKN NSVCSIGLYVKCGSRYEEISEQVNEQGMSVMLENMAFHSTAHLSHLRTIKSLEKIGANVS CNAFREHIVYTCECLKEYLPVVTNLLIGNVLFPRFLSWEMKNNVNRLNTMRTKLFENNEL YITELLHNTAWYNNTLGNKLYVCESSVENYTANNLRNFMLKHFSPKNMTLVGVNVDHEEL TKWTSRAFQDYVSIPYTSQKEVTPKYTGGFVSVEDKNVKKTNIAIAYETKGGWKTSDMIT LTVLQTLMGGGGSFSTGGPGKGMYSRLFLNVLNNYNFIESCMAFSTQHSDTGLFGLYFTG EPANTMDIINAMALEFQKMNKVTDEELNRAKKSLKSFMWMSLEYKSILMEDLARQMMILN RVLSGKQLCDAIDAVTKEDISRIVGHFLKTKPTVVVYGNINHSPHYDEICKILG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_080095.fa Sequence name : PVX_080095 Sequence length : 534 VALUES OF COMPUTED PARAMETERS Coef20 : 3.321 CoefTot : -1.454 ChDiff : 8 ZoneTo : 24 KR : 5 DE : 0 CleavSite : 16 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.688 1.347 0.160 0.531 MesoH : 0.237 0.333 -0.231 0.277 MuHd_075 : 22.893 13.831 7.432 5.870 MuHd_095 : 13.677 11.353 5.447 3.327 MuHd_100 : 13.605 11.302 3.532 3.649 MuHd_105 : 17.015 14.088 5.647 5.063 Hmax_075 : 8.300 6.000 2.256 3.170 Hmax_095 : -3.675 5.950 -1.704 1.260 Hmax_100 : 6.400 11.200 -1.983 3.860 Hmax_105 : 6.300 7.700 -0.288 4.360 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8600 0.1400 DFMC : 0.7529 0.2471
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 534 PVX_080095 MNGHVQKLKVVLCRNKPGKQLYSSEALKVKRNPNLEKLYSGEKQNLAKVTFKKEKIEDIIKEVKFDYYYFNEGKKNIYRD 80 IPLNIAVVKESELPPFQQVDEKLHFSVLENDLRIISTNKNNSVCSIGLYVKCGSRYEEISEQVNEQGMSVMLENMAFHST 160 AHLSHLRTIKSLEKIGANVSCNAFREHIVYTCECLKEYLPVVTNLLIGNVLFPRFLSWEMKNNVNRLNTMRTKLFENNEL 240 YITELLHNTAWYNNTLGNKLYVCESSVENYTANNLRNFMLKHFSPKNMTLVGVNVDHEELTKWTSRAFQDYVSIPYTSQK 320 EVTPKYTGGFVSVEDKNVKKTNIAIAYETKGGWKTSDMITLTVLQTLMGGGGSFSTGGPGKGMYSRLFLNVLNNYNFIES 400 CMAFSTQHSDTGLFGLYFTGEPANTMDIINAMALEFQKMNKVTDEELNRAKKSLKSFMWMSLEYKSILMEDLARQMMILN 480 RVLSGKQLCDAIDAVTKEDISRIVGHFLKTKPTVVVYGNINHSPHYDEICKILG 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ...................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_080095 7 MNGHVQK|LK 0.061 . PVX_080095 9 GHVQKLK|VV 0.065 . PVX_080095 14 LKVVLCR|NK 0.091 . PVX_080095 16 VVLCRNK|PG 0.055 . PVX_080095 19 CRNKPGK|QL 0.100 . PVX_080095 28 YSSEALK|VK 0.057 . PVX_080095 30 SEALKVK|RN 0.065 . PVX_080095 31 EALKVKR|NP 0.112 . PVX_080095 37 RNPNLEK|LY 0.068 . PVX_080095 43 KLYSGEK|QN 0.057 . PVX_080095 48 EKQNLAK|VT 0.085 . PVX_080095 52 LAKVTFK|KE 0.061 . PVX_080095 53 AKVTFKK|EK 0.096 . PVX_080095 55 VTFKKEK|IE 0.069 . PVX_080095 61 KIEDIIK|EV 0.060 . PVX_080095 64 DIIKEVK|FD 0.061 . PVX_080095 74 YYFNEGK|KN 0.054 . PVX_080095 75 YFNEGKK|NI 0.086 . PVX_080095 79 GKKNIYR|DI 0.108 . PVX_080095 89 LNIAVVK|ES 0.066 . PVX_080095 102 FQQVDEK|LH 0.065 . PVX_080095 113 VLENDLR|II 0.087 . PVX_080095 119 RIISTNK|NN 0.061 . PVX_080095 131 SIGLYVK|CG 0.064 . PVX_080095 135 YVKCGSR|YE 0.086 . PVX_080095 167 AHLSHLR|TI 0.079 . PVX_080095 170 SHLRTIK|SL 0.302 . PVX_080095 174 TIKSLEK|IG 0.056 . PVX_080095 185 VSCNAFR|EH 0.085 . PVX_080095 196 YTCECLK|EY 0.057 . PVX_080095 214 GNVLFPR|FL 0.124 . PVX_080095 221 FLSWEMK|NN 0.075 . PVX_080095 226 MKNNVNR|LN 0.096 . PVX_080095 231 NRLNTMR|TK 0.077 . PVX_080095 233 LNTMRTK|LF 0.067 . PVX_080095 259 NNTLGNK|LY 0.051 . PVX_080095 276 YTANNLR|NF 0.081 . PVX_080095 281 LRNFMLK|HF 0.107 . PVX_080095 286 LKHFSPK|NM 0.076 . PVX_080095 302 DHEELTK|WT 0.070 . PVX_080095 306 LTKWTSR|AF 0.097 . PVX_080095 320 IPYTSQK|EV 0.100 . PVX_080095 325 QKEVTPK|YT 0.094 . PVX_080095 336 FVSVEDK|NV 0.078 . PVX_080095 339 VEDKNVK|KT 0.063 . PVX_080095 340 EDKNVKK|TN 0.101 . PVX_080095 350 AIAYETK|GG 0.068 . PVX_080095 354 ETKGGWK|TS 0.061 . PVX_080095 381 STGGPGK|GM 0.067 . PVX_080095 386 GKGMYSR|LF 0.097 . PVX_080095 438 MALEFQK|MN 0.058 . PVX_080095 441 EFQKMNK|VT 0.070 . PVX_080095 449 TDEELNR|AK 0.072 . PVX_080095 451 EELNRAK|KS 0.064 . PVX_080095 452 ELNRAKK|SL 0.483 . PVX_080095 455 RAKKSLK|SF 0.078 . PVX_080095 465 WMSLEYK|SI 0.081 . PVX_080095 474 LMEDLAR|QM 0.080 . PVX_080095 481 QMMILNR|VL 0.098 . PVX_080095 486 NRVLSGK|QL 0.095 . PVX_080095 497 AIDAVTK|ED 0.059 . PVX_080095 502 TKEDISR|IV 0.179 . PVX_080095 509 IVGHFLK|TK 0.061 . PVX_080095 511 GHFLKTK|PT 0.070 . PVX_080095 531 HYDEICK|IL 0.065 . ____________________________^_________________

  • Fasta :-

    >PVX_080095 ACCGTTTTGCCTTTCTCCGTTAAAATAGTACACCCATTTTTTCTTCTTCAAAAAAGCGGA AGTGAAAGGGTTATATATGTGCCATTTTGCGTAAAAGCACAATCCTATTTCAAAATGGGA TTAAACATGTAATGCGCAAAGAAGAAGCAGTTATGCGTAACCCTCCCTGCGGTAAGAAGA TATGTATACCCCAAAATAGGAAATTTCCCCCCCTTTTTTTTACCCCCAATATACGCCCAT CGCTCATTTATTATGACCTGTGCTCAGTTAAACAGGTAAAGAAGTAGGAAAAAAAAGGGA AGAAAAAAAAGAAGAAAAAGAAGAAGAATACGCGCATTTGATTCTTCCATTTTTGTAGAA AAAGGAAGCAGCAATTTTTCTGTGCTTTCCCCACTCATCAGTGTTGTTTAAAGTGTACAT TTTTACGTCCCGCGGAAGGGGCCACCACATCGCCACTGCCATCACCACTATTGCCCCCGT TCGAGACTGCCCCCGCGTGAACATGCAGCCGAAGGCGCGCACAAGATAGACCTGCGGACG TGTGTGAGTAGCGGCACATGGGCCAACAAACATACATAGCCGCGTATCTGAGTCTCCACC GAAGGGGTCCCTGTTCCCCCCTCGTAACTGCTGCCACTAACTACTACCGCAGCAGTTGGG GCCCACCGCGCCGTTTCCTCCATCTCCCTTAATAAGCACACAACACAAAAATGAACGGAC ACGTACAGAAACTCAAAGTAGTCCTGTGCAGGAACAAACCGGGGAAGCAACTGTACAGCA GTGAAGCCCTAAAAGTGAAGAGAAACCCAAACTTGGAAAAGTTATATTCAGGGGAAAAAC AAAACCTAGCAAAAGTGACATTCAAGAAGGAGAAAATCGAAGACATCATTAAGGAGGTGA AATTTGATTACTACTATTTTAATGAAGGGAAGAAAAACATCTATAGGGACATCCCCCTCA ACATTGCTGTGGTAAAGGAGTCTGAGTTGCCACCCTTCCAGCAGGTTGACGAGAAGTTAC ATTTCTCAGTTTTGGAAAATGACCTCCGGATTATTTCCACCAACAAGAACAACAGCGTTT GTTCTATCGGGCTGTACGTGAAGTGCGGGTCCAGGTACGAAGAAATAAGCGAGCAGGTGA ACGAGCAGGGCATGAGCGTGATGCTGGAGAACATGGCGTTCCACAGCACAGCGCACCTGT CCCACCTGCGGACGATCAAGTCGCTGGAAAAAATAGGGGCAAACGTAAGCTGCAACGCGT TTCGTGAGCACATAGTGTACACCTGCGAATGCTTGAAGGAGTACCTGCCCGTAGTGACCA ACCTACTAATTGGAAACGTCCTATTCCCTCGCTTCCTCTCCTGGGAAATGAAAAACAATG TGAATCGACTCAACACCATGCGCACCAAGTTATTCGAAAACAACGAGCTGTATATAACCG AACTTTTGCACAACACCGCATGGTACAATAACACCTTAGGGAATAAACTCTATGTGTGTG AATCTAGTGTGGAGAATTACACCGCCAATAATTTAAGAAATTTTATGCTGAAACATTTCT CTCCAAAAAATATGACCCTAGTTGGTGTCAATGTAGACCATGAGGAGTTAACCAAATGGA CATCCAGGGCATTTCAAGATTATGTGTCCATACCGTATACTAGTCAGAAGGAAGTGACCC CAAAATATACAGGAGGGTTTGTAAGTGTGGAAGATAAAAATGTGAAAAAGACCAACATTG CTATAGCGTACGAAACGAAAGGTGGTTGGAAGACATCAGACATGATTACACTGACAGTGT TGCAGACACTTATGGGTGGAGGGGGCTCTTTCTCCACGGGGGGACCAGGAAAAGGAATGT ACTCTAGATTATTCCTAAACGTTTTGAACAATTATAATTTTATAGAATCTTGTATGGCCT TTAGTACACAACACTCAGATACGGGTTTGTTTGGACTCTACTTCACTGGGGAACCAGCCA ATACCATGGATATAATAAATGCCATGGCTTTGGAATTTCAAAAAATGAATAAAGTTACAG ATGAAGAATTAAATAGAGCCAAGAAAAGTTTGAAGAGCTTTATGTGGATGAGCTTAGAGT ATAAGTCTATACTAATGGAGGACTTGGCTAGACAGATGATGATTCTAAATCGTGTGCTCT CTGGAAAGCAGCTGTGTGACGCTATTGATGCAGTGACGAAGGAGGACATAAGCCGAATTG TGGGCCACTTTTTGAAAACCAAGCCGACGGTTGTTGTCTATGGCAACATTAACCATTCTC CTCACTACGACGAAATATGCAAAATTTTGGGCTAA
  • Download Fasta

  • Fasta :-

    MNGHVQKLKVVLCRNKPGKQLYSSEALKVKRNPNLEKLYSGEKQNLAKVTFKKEKIEDII KEVKFDYYYFNEGKKNIYRDIPLNIAVVKESELPPFQQVDEKLHFSVLENDLRIISTNKN NSVCSIGLYVKCGSRYEEISEQVNEQGMSVMLENMAFHSTAHLSHLRTIKSLEKIGANVS CNAFREHIVYTCECLKEYLPVVTNLLIGNVLFPRFLSWEMKNNVNRLNTMRTKLFENNEL YITELLHNTAWYNNTLGNKLYVCESSVENYTANNLRNFMLKHFSPKNMTLVGVNVDHEEL TKWTSRAFQDYVSIPYTSQKEVTPKYTGGFVSVEDKNVKKTNIAIAYETKGGWKTSDMIT LTVLQTLMGGGGSFSTGGPGKGMYSRLFLNVLNNYNFIESCMAFSTQHSDTGLFGLYFTG EPANTMDIINAMALEFQKMNKVTDEELNRAKKSLKSFMWMSLEYKSILMEDLARQMMILN RVLSGKQLCDAIDAVTKEDISRIVGHFLKTKPTVVVYGNINHSPHYDEICKILG

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_080095484 SNRVLSGKQL0.992unspPVX_080095484 SNRVLSGKQL0.992unspPVX_080095484 SNRVLSGKQL0.992unspPVX_080095284 SLKHFSPKNM0.991unspPVX_080095318 SIPYTSQKEV0.994unsp
PVX_080095      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India