PVX_080365 | Eukaryotic translation initiation factor 3 subunit 9, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_080365OTHER0.9997920.0001910.000017
No Results

  • Fasta :-

    >PVX_080365 MVKVSESELSDKGLEEFLSDDSDEGNEELLSKKYAEKEALITLETKFPKIVTILGIPKVE EEKHSRLAEVLKKLFIRHLNAKISDSSLLNIKIDMPVDEEKKTKGICFVTFNDSFQANEA VKILNKLKLDAKHVLTASKMDDIENIINRDEHVMPINVVGFTREKIRWWLYDERCREQFI VRYDSHFEVHWFDPLEKEPQLIYTTYKKSAPFSSVQWSNQGSYLVSFHNPGIALWGGDNF EKLIRLQHKSVKEISFSPNENYVLTWDGTPASLRNEKSICIWRVITGKLLRSFITPEFSA RDKSYHYFLWSPDDKYIACIGKQKEVYVYELPSMLLMEDHEKKRTPLKYTFVKEFDWSPV DNIVSIWIPGSKVTPGTLILVDIPSRKELVSRKIYDVVHASIHWQSKGDYLCLKTTIEKK ISKKSKKEFTQLEIFRIREKNIPVDNIQIEGIKTKQFHWEESNSNRFALIVRDEATSRQQ IRFYKIENKGTARNAKWTSTFDINSQMNFMRWSPQGSYFILASLGSEGLLYFCCLNASDE VEVIHKDEHLLANSVSWSNCGRYLVTSVSSMANAASSNYREENSETGFFIWSFQGRCLMT IKKPSFFQFFFRPHPKSLFSDKQKLEIKNNLKDYSKKFDVMDEKVRHAKRNQLISDRKTV EASFNQRMEKVTQLFHSFKEYEEFKKNWEQFESQFEWEEKTVVIEHVLSVKQEIFA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_080365.fa Sequence name : PVX_080365 Sequence length : 716 VALUES OF COMPUTED PARAMETERS Coef20 : 3.343 CoefTot : -0.001 ChDiff : 4 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.435 1.688 0.357 0.625 MesoH : -0.368 0.182 -0.332 0.187 MuHd_075 : 30.165 18.854 9.049 5.233 MuHd_095 : 30.978 15.980 7.952 5.447 MuHd_100 : 16.577 7.146 4.524 2.432 MuHd_105 : 17.686 9.286 4.763 2.679 Hmax_075 : 14.700 16.800 3.069 5.483 Hmax_095 : 7.088 11.988 0.539 4.515 Hmax_100 : -5.700 2.800 -3.072 2.220 Hmax_105 : 6.700 12.200 0.108 4.060 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8216 0.1784 DFMC : 0.9435 0.0565
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 716 PVX_080365 MVKVSESELSDKGLEEFLSDDSDEGNEELLSKKYAEKEALITLETKFPKIVTILGIPKVEEEKHSRLAEVLKKLFIRHLN 80 AKISDSSLLNIKIDMPVDEEKKTKGICFVTFNDSFQANEAVKILNKLKLDAKHVLTASKMDDIENIINRDEHVMPINVVG 160 FTREKIRWWLYDERCREQFIVRYDSHFEVHWFDPLEKEPQLIYTTYKKSAPFSSVQWSNQGSYLVSFHNPGIALWGGDNF 240 EKLIRLQHKSVKEISFSPNENYVLTWDGTPASLRNEKSICIWRVITGKLLRSFITPEFSARDKSYHYFLWSPDDKYIACI 320 GKQKEVYVYELPSMLLMEDHEKKRTPLKYTFVKEFDWSPVDNIVSIWIPGSKVTPGTLILVDIPSRKELVSRKIYDVVHA 400 SIHWQSKGDYLCLKTTIEKKISKKSKKEFTQLEIFRIREKNIPVDNIQIEGIKTKQFHWEESNSNRFALIVRDEATSRQQ 480 IRFYKIENKGTARNAKWTSTFDINSQMNFMRWSPQGSYFILASLGSEGLLYFCCLNASDEVEVIHKDEHLLANSVSWSNC 560 GRYLVTSVSSMANAASSNYREENSETGFFIWSFQGRCLMTIKKPSFFQFFFRPHPKSLFSDKQKLEIKNNLKDYSKKFDV 640 MDEKVRHAKRNQLISDRKTVEASFNQRMEKVTQLFHSFKEYEEFKKNWEQFESQFEWEEKTVVIEHVLSVKQEIFA 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ............................................................................ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_080365 3 ----MVK|VS 0.064 . PVX_080365 12 ESELSDK|GL 0.073 . PVX_080365 32 NEELLSK|KY 0.062 . PVX_080365 33 EELLSKK|YA 0.120 . PVX_080365 37 SKKYAEK|EA 0.073 . PVX_080365 46 LITLETK|FP 0.059 . PVX_080365 49 LETKFPK|IV 0.081 . PVX_080365 58 TILGIPK|VE 0.057 . PVX_080365 63 PKVEEEK|HS 0.061 . PVX_080365 66 EEEKHSR|LA 0.094 . PVX_080365 72 RLAEVLK|KL 0.066 . PVX_080365 73 LAEVLKK|LF 0.096 . PVX_080365 77 LKKLFIR|HL 0.121 . PVX_080365 82 IRHLNAK|IS 0.089 . PVX_080365 92 SSLLNIK|ID 0.060 . PVX_080365 101 MPVDEEK|KT 0.067 . PVX_080365 102 PVDEEKK|TK 0.096 . PVX_080365 104 DEEKKTK|GI 0.079 . PVX_080365 122 QANEAVK|IL 0.064 . PVX_080365 126 AVKILNK|LK 0.058 . PVX_080365 128 KILNKLK|LD 0.062 . PVX_080365 132 KLKLDAK|HV 0.076 . PVX_080365 139 HVLTASK|MD 0.059 . PVX_080365 149 IENIINR|DE 0.109 . PVX_080365 163 NVVGFTR|EK 0.073 . PVX_080365 165 VGFTREK|IR 0.053 . PVX_080365 167 FTREKIR|WW 0.100 . PVX_080365 174 WWLYDER|CR 0.076 . PVX_080365 176 LYDERCR|EQ 0.077 . PVX_080365 182 REQFIVR|YD 0.119 . PVX_080365 197 WFDPLEK|EP 0.056 . PVX_080365 207 LIYTTYK|KS 0.060 . PVX_080365 208 IYTTYKK|SA 0.115 . PVX_080365 242 GGDNFEK|LI 0.063 . PVX_080365 245 NFEKLIR|LQ 0.081 . PVX_080365 249 LIRLQHK|SV 0.133 . PVX_080365 252 LQHKSVK|EI 0.081 . PVX_080365 274 GTPASLR|NE 0.069 . PVX_080365 277 ASLRNEK|SI 0.200 . PVX_080365 283 KSICIWR|VI 0.096 . PVX_080365 288 WRVITGK|LL 0.066 . PVX_080365 291 ITGKLLR|SF 0.136 . PVX_080365 301 TPEFSAR|DK 0.159 . PVX_080365 303 EFSARDK|SY 0.095 . PVX_080365 315 LWSPDDK|YI 0.092 . PVX_080365 322 YIACIGK|QK 0.067 . PVX_080365 324 ACIGKQK|EV 0.077 . PVX_080365 342 LMEDHEK|KR 0.060 . PVX_080365 343 MEDHEKK|RT 0.086 . PVX_080365 344 EDHEKKR|TP 0.157 . PVX_080365 348 KKRTPLK|YT 0.099 . PVX_080365 353 LKYTFVK|EF 0.071 . PVX_080365 372 IWIPGSK|VT 0.057 . PVX_080365 386 LVDIPSR|KE 0.067 . PVX_080365 387 VDIPSRK|EL 0.068 . PVX_080365 392 RKELVSR|KI 0.139 . PVX_080365 393 KELVSRK|IY 0.093 . PVX_080365 407 SIHWQSK|GD 0.079 . PVX_080365 414 GDYLCLK|TT 0.063 . PVX_080365 419 LKTTIEK|KI 0.062 . PVX_080365 420 KTTIEKK|IS 0.088 . PVX_080365 423 IEKKISK|KS 0.067 . PVX_080365 424 EKKISKK|SK 0.145 . PVX_080365 426 KISKKSK|KE 0.101 . PVX_080365 427 ISKKSKK|EF 0.156 . PVX_080365 436 TQLEIFR|IR 0.095 . PVX_080365 438 LEIFRIR|EK 0.081 . PVX_080365 440 IFRIREK|NI 0.061 . PVX_080365 453 IQIEGIK|TK 0.054 . PVX_080365 455 IEGIKTK|QF 0.085 . PVX_080365 466 EESNSNR|FA 0.170 . PVX_080365 472 RFALIVR|DE 0.102 . PVX_080365 478 RDEATSR|QQ 0.080 . PVX_080365 482 TSRQQIR|FY 0.160 . PVX_080365 485 QQIRFYK|IE 0.133 . PVX_080365 489 FYKIENK|GT 0.064 . PVX_080365 493 ENKGTAR|NA 0.095 . PVX_080365 496 GTARNAK|WT 0.209 . PVX_080365 511 SQMNFMR|WS 0.115 . PVX_080365 546 EVEVIHK|DE 0.060 . PVX_080365 562 SWSNCGR|YL 0.140 . PVX_080365 580 AASSNYR|EE 0.100 . PVX_080365 596 IWSFQGR|CL 0.158 . PVX_080365 602 RCLMTIK|KP 0.060 . PVX_080365 603 CLMTIKK|PS 0.093 . PVX_080365 612 FFQFFFR|PH 0.111 . PVX_080365 616 FFRPHPK|SL 0.083 . PVX_080365 622 KSLFSDK|QK 0.068 . PVX_080365 624 LFSDKQK|LE 0.064 . PVX_080365 628 KQKLEIK|NN 0.056 . PVX_080365 632 EIKNNLK|DY 0.079 . PVX_080365 636 NLKDYSK|KF 0.060 . PVX_080365 637 LKDYSKK|FD 0.105 . PVX_080365 644 FDVMDEK|VR 0.061 . PVX_080365 646 VMDEKVR|HA 0.090 . PVX_080365 649 EKVRHAK|RN 0.113 . PVX_080365 650 KVRHAKR|NQ 0.147 . PVX_080365 657 NQLISDR|KT 0.073 . PVX_080365 658 QLISDRK|TV 0.129 . PVX_080365 667 EASFNQR|ME 0.084 . PVX_080365 670 FNQRMEK|VT 0.097 . PVX_080365 679 QLFHSFK|EY 0.070 . PVX_080365 685 KEYEEFK|KN 0.068 . PVX_080365 686 EYEEFKK|NW 0.131 . PVX_080365 700 QFEWEEK|TV 0.068 . PVX_080365 711 EHVLSVK|QE 0.060 . ____________________________^_________________

  • Fasta :-

    >PVX_080365 GACACGTAACTTCGAAAGAGCGAAGCGTAGGAGAGAGTGTAAAAAAAAACGGAAAAAAAA AAAACAGCGCAAAATAGCCCCCAAAATAGCTTAAACGTAGCCGCCCAATAGCGCAAAGAA TAACTCATTTTGCAAACTGGCCAACGCTTAGCAGGCGAATGCAAAAATATAACCCTTTGC CGACGCAGCATATTTCGCGCAACGGCATTTTTTATATGCCCAGGAGAAGCGGCTGCGGTA CCTCTGTCGCGAGCGCGTGACGAAGGGGCTTGGAAGATTTTTCCCTTTGGCCGTGGCAAG TTTGGGAAAGCCATCGAAGGTGACCCACTTTAGAGAGTTTGGTCAACCCGGCACGACGCA TCCCGCGGGCACATGTTCGCATCTCGTCAGGGGGGAGGCCTGTAAAATATGCGCGCCGCG GCTGATAACGCAGTGGCCGTTCCGTTTTGGCTAGTCGCCTGAAAAGAAAGAAGCACCCAT TGGGGTAGCAGCGGTGGTAGAAGCGGTTGCAGCGACGTGGAAGCGATACCACAACCGTAG CATCTGTAGAAGCCGCAGCAGCCGTAGCAGCCGTAGCAGCCGTAGCAGCCGCAGAAGCCG CAGAAGCCGCAAAAGCCGCAAAAGCCGCAAAAGCCGCAAACGCGACGACAGGATGGTGAA GGTCTCGGAGAGCGAACTGAGCGACAAGGGGCTGGAGGAGTTCCTGTCGGACGACAGCGA CGAGGGAAACGAGGAACTGCTGAGCAAGAAGTACGCGGAGAAGGAGGCGCTGATCACGCT GGAAACCAAGTTCCCCAAAATAGTGACGATCCTGGGGATTCCAAAGGTGGAGGAAGAAAA GCACAGCAGGTTGGCAGAGGTGCTGAAAAAGCTCTTCATAAGACACCTGAATGCCAAAAT AAGTGACTCCTCCCTGTTGAACATCAAAATAGACATGCCAGTGGATGAGGAGAAGAAGAC CAAAGGAATTTGCTTCGTCACCTTTAATGATAGTTTCCAGGCAAACGAAGCGGTAAAAAT TCTAAACAAGCTGAAGCTGGATGCCAAGCATGTCCTAACAGCATCAAAAATGGATGACAT TGAAAATATTATAAATAGGGATGAACACGTCATGCCAATTAACGTCGTAGGATTTACGAG AGAAAAAATTAGGTGGTGGTTGTATGACGAAAGGTGTAGAGAACAATTCATCGTCAGGTA CGACTCCCATTTTGAAGTCCACTGGTTTGATCCTCTTGAAAAGGAGCCACAGCTCATTTA CACCACATATAAAAAGAGTGCCCCTTTTTCCAGCGTACAGTGGAGCAACCAGGGATCCTA CTTGGTCAGTTTCCACAACCCAGGTATAGCTCTATGGGGGGGAGATAATTTTGAAAAACT CATCCGATTGCAACATAAGAGTGTAAAAGAAATTAGCTTTTCTCCAAACGAAAACTACGT TCTTACATGGGATGGTACCCCTGCTTCGTTGAGAAATGAAAAGTCCATATGCATTTGGAG AGTGATCACTGGGAAGTTGTTACGCTCGTTTATTACGCCTGAGTTTAGCGCGAGGGATAA GAGCTACCACTACTTCCTGTGGAGCCCGGATGATAAGTACATCGCGTGTATAGGGAAACA GAAAGAGGTGTACGTTTATGAGTTACCAAGCATGTTGCTGATGGAAGACCACGAGAAGAA GAGGACCCCCCTGAAATACACCTTCGTGAAAGAATTCGACTGGTCCCCGGTGGATAATAT AGTCTCCATTTGGATCCCAGGGTCTAAGGTCACTCCTGGGACGCTCATCTTGGTGGATAT CCCCTCCAGAAAGGAACTCGTTTCTAGAAAGATCTACGACGTTGTGCATGCGTCTATTCA CTGGCAAAGCAAAGGAGATTACCTTTGCCTGAAAACTACCATCGAGAAAAAGATCAGCAA GAAGAGCAAGAAGGAGTTCACCCAACTGGAAATCTTCCGCATAAGGGAAAAGAACATCCC CGTGGATAACATCCAAATAGAGGGAATCAAAACGAAGCAGTTTCACTGGGAAGAGTCCAA CAGCAATCGATTCGCTCTAATCGTTAGGGATGAAGCTACGAGCAGACAGCAAATTAGATT TTACAAAATTGAAAATAAAGGCACAGCGAGGAATGCCAAGTGGACGAGCACATTTGATAT CAACAGCCAGATGAACTTCATGCGGTGGTCACCACAGGGATCCTATTTCATCTTAGCTTC CTTAGGATCTGAAGGACTGCTCTACTTTTGCTGCCTCAATGCGAGTGACGAAGTGGAGGT CATACACAAGGATGAGCACCTCTTGGCAAACTCCGTCTCCTGGAGCAACTGTGGAAGGTA CCTAGTCACCTCTGTTTCGAGTATGGCTAACGCGGCGAGCTCCAATTATAGGGAAGAGAA CAGCGAAACGGGATTTTTCATCTGGTCCTTCCAGGGCAGGTGCCTCATGACCATTAAGAA GCCCTCCTTCTTCCAGTTCTTCTTCAGACCACACCCCAAGTCCCTATTCAGCGACAAGCA AAAATTGGAGATTAAAAATAACCTCAAGGATTACTCAAAGAAGTTTGACGTCATGGATGA AAAGGTCAGGCACGCCAAACGAAATCAACTCATTTCCGACCGAAAGACGGTGGAGGCTTC GTTTAACCAGCGAATGGAGAAGGTCACGCAGCTCTTCCACTCCTTTAAGGAGTATGAGGA GTTCAAGAAGAACTGGGAGCAGTTCGAGAGCCAGTTCGAGTGGGAGGAGAAGACCGTCGT CATTGAGCACGTCCTCTCGGTTAAGCAGGAGATATTCGCCTGA
  • Download Fasta

  • Fasta :-

    MVKVSESELSDKGLEEFLSDDSDEGNEELLSKKYAEKEALITLETKFPKIVTILGIPKVE EEKHSRLAEVLKKLFIRHLNAKISDSSLLNIKIDMPVDEEKKTKGICFVTFNDSFQANEA VKILNKLKLDAKHVLTASKMDDIENIINRDEHVMPINVVGFTREKIRWWLYDERCREQFI VRYDSHFEVHWFDPLEKEPQLIYTTYKKSAPFSSVQWSNQGSYLVSFHNPGIALWGGDNF EKLIRLQHKSVKEISFSPNENYVLTWDGTPASLRNEKSICIWRVITGKLLRSFITPEFSA RDKSYHYFLWSPDDKYIACIGKQKEVYVYELPSMLLMEDHEKKRTPLKYTFVKEFDWSPV DNIVSIWIPGSKVTPGTLILVDIPSRKELVSRKIYDVVHASIHWQSKGDYLCLKTTIEKK ISKKSKKEFTQLEIFRIREKNIPVDNIQIEGIKTKQFHWEESNSNRFALIVRDEATSRQQ IRFYKIENKGTARNAKWTSTFDINSQMNFMRWSPQGSYFILASLGSEGLLYFCCLNASDE VEVIHKDEHLLANSVSWSNCGRYLVTSVSSMANAASSNYREENSETGFFIWSFQGRCLMT IKKPSFFQFFFRPHPKSLFSDKQKLEIKNNLKDYSKKFDVMDEKVRHAKRNQLISDRKTV EASFNQRMEKVTQLFHSFKEYEEFKKNWEQFESQFEWEEKTVVIEHVLSVKQEIFA

  • title: polypeptide substrate binding site
  • coordinates: I53,I56,K63,R66,L67,E69,V70,L71,K73,L74,R77,I123,L124,N125,K126,K128,L129,V134,L135
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_080365185 SVRYDSHFEV0.993unspPVX_080365185 SVRYDSHFEV0.993unspPVX_080365185 SVRYDSHFEV0.993unspPVX_080365250 SLQHKSVKEI0.995unspPVX_080365257 SEISFSPNEN0.992unspPVX_080365299 STPEFSARDK0.995unspPVX_080365358 SEFDWSPVDN0.994unspPVX_080365422 SEKKISKKSK0.996unspPVX_080365425 SISKKSKKEF0.998unspPVX_080365677 SQLFHSFKEY0.997unspPVX_08036510 SESELSDKGL0.995unspPVX_08036522 SLSDDSDEGN0.995unsp
PVX_080365      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India