PVX_082780 | mitochondrial intermediate peptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_082780OTHER0.7707140.1093970.119889
No Results

  • Fasta :-

    >PVX_082780 MKRRPCQLVQAVCNVATLEGINWCATPRKLRGTLLSGFPGGTSRRNFFFKKESDKIGGAA NLLAKLNLKNFVKKGRNGGGITCSEEADLKENCSSQSLGQTDKEHLQDVDTLSEGDLQRI DKIIAQLSRKEKQPNGEGHLLELIGLQSDGDNIPQASLVCIRTCDSILKKMCKEENIFKI VNMVDTVSNNLCKLGDALELLRNLHTNQGVMAKAHDALEKLTTYIDRINIDEQIYHFLKK KYEQHAHQLDREHAEVLLNMIVSMENQGVHIKDKKQRREYLKLQAEEKCISFHAASNVAN EYDGVFIQKGRLLPFIDEQVIQNYQEKIKPFIESGKVKKKNTREGFDSNEWVFLLQDSSF IMTVLENVNDEEVANRAYALLRKPNQTFLKNILLLQYYRNILTQFRNFKNFSEYSLKNCI LNSPEKVHYFLGKVFNTVLPRFLEELRFVERYIDAVSCRGANKEERPSGGTTLHSAVDGT PEKVSQNTVEISTQPFNTTDGHPRSGDGGGRRPKLTPQNVFYYMNQIRKEKLKQIEAEMK NRLTLYQVIRFVVNILKDSYALEMANVAPLPNELWDESILKFEIRDGSHTYGYLYMDLFE RENKSHSIAQYTVRCSKNMNACLKHRWFEEGARECPFFYAGIVRGGANSDTGSDSGSDTT DGTPNCASTGGRPHRQTYRQTTSTFLVCNFSTKLSAAEGAAPASHPPQDNIFINEQIANS LGRIKMSLDKVNMFLHEFGHTLHCILSSTYLQHLSGNRGGVDFSEFTSHFFEEYLNSYDA LLRLYGGDGAEPGGGSDQTGEKREHRERMVKRYLESKNILCYYSIMQVTIQSIIDQIFYC LSEKSSCISERNELIEKKIKEYFSGVYYRDIFILELFPQIHFSKTTHLVHYPANYFCYLY CSVLSKYVWTRTFKRDLMNRGKAAEIVNFMRGGSVDSSLRNIIALVEDDPEKVQYYTENP QHLPLEDFLEHYSGENKAEEYNSFLEAL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_082780.fa Sequence name : PVX_082780 Sequence length : 988 VALUES OF COMPUTED PARAMETERS Coef20 : 4.166 CoefTot : -1.339 ChDiff : -1 ZoneTo : 51 KR : 10 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.841 1.229 0.084 0.465 MesoH : -0.528 0.182 -0.422 0.168 MuHd_075 : 36.526 20.993 8.133 7.481 MuHd_095 : 29.656 18.241 10.489 6.726 MuHd_100 : 28.184 21.918 8.718 7.405 MuHd_105 : 26.525 23.344 7.800 7.925 Hmax_075 : 16.900 8.867 1.986 4.590 Hmax_095 : 11.900 16.275 5.648 4.430 Hmax_100 : 15.400 18.500 5.030 5.780 Hmax_105 : 5.000 13.183 3.039 3.660 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2339 0.7661 DFMC : 0.2457 0.7543 This protein is probably imported in mitochondria. f(Ser) = 0.0392 f(Arg) = 0.1176 CMi = 0.16708 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 988 PVX_082780 MKRRPCQLVQAVCNVATLEGINWCATPRKLRGTLLSGFPGGTSRRNFFFKKESDKIGGAANLLAKLNLKNFVKKGRNGGG 80 ITCSEEADLKENCSSQSLGQTDKEHLQDVDTLSEGDLQRIDKIIAQLSRKEKQPNGEGHLLELIGLQSDGDNIPQASLVC 160 IRTCDSILKKMCKEENIFKIVNMVDTVSNNLCKLGDALELLRNLHTNQGVMAKAHDALEKLTTYIDRINIDEQIYHFLKK 240 KYEQHAHQLDREHAEVLLNMIVSMENQGVHIKDKKQRREYLKLQAEEKCISFHAASNVANEYDGVFIQKGRLLPFIDEQV 320 IQNYQEKIKPFIESGKVKKKNTREGFDSNEWVFLLQDSSFIMTVLENVNDEEVANRAYALLRKPNQTFLKNILLLQYYRN 400 ILTQFRNFKNFSEYSLKNCILNSPEKVHYFLGKVFNTVLPRFLEELRFVERYIDAVSCRGANKEERPSGGTTLHSAVDGT 480 PEKVSQNTVEISTQPFNTTDGHPRSGDGGGRRPKLTPQNVFYYMNQIRKEKLKQIEAEMKNRLTLYQVIRFVVNILKDSY 560 ALEMANVAPLPNELWDESILKFEIRDGSHTYGYLYMDLFERENKSHSIAQYTVRCSKNMNACLKHRWFEEGARECPFFYA 640 GIVRGGANSDTGSDSGSDTTDGTPNCASTGGRPHRQTYRQTTSTFLVCNFSTKLSAAEGAAPASHPPQDNIFINEQIANS 720 LGRIKMSLDKVNMFLHEFGHTLHCILSSTYLQHLSGNRGGVDFSEFTSHFFEEYLNSYDALLRLYGGDGAEPGGGSDQTG 800 EKREHRERMVKRYLESKNILCYYSIMQVTIQSIIDQIFYCLSEKSSCISERNELIEKKIKEYFSGVYYRDIFILELFPQI 880 HFSKTTHLVHYPANYFCYLYCSVLSKYVWTRTFKRDLMNRGKAAEIVNFMRGGSVDSSLRNIIALVEDDPEKVQYYTENP 960 QHLPLEDFLEHYSGENKAEEYNSFLEAL 1040 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ............................ 1040 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_082780 2 -----MK|RR 0.060 . PVX_082780 3 ----MKR|RP 0.152 . PVX_082780 4 ---MKRR|PC 0.148 . PVX_082780 28 NWCATPR|KL 0.094 . PVX_082780 29 WCATPRK|LR 0.101 . PVX_082780 31 ATPRKLR|GT 0.217 . PVX_082780 44 FPGGTSR|RN 0.076 . PVX_082780 45 PGGTSRR|NF 0.123 . PVX_082780 50 RRNFFFK|KE 0.114 . PVX_082780 51 RNFFFKK|ES 0.165 . PVX_082780 55 FKKESDK|IG 0.072 . PVX_082780 65 AANLLAK|LN 0.060 . PVX_082780 69 LAKLNLK|NF 0.059 . PVX_082780 73 NLKNFVK|KG 0.066 . PVX_082780 74 LKNFVKK|GR 0.164 . PVX_082780 76 NFVKKGR|NG 0.121 . PVX_082780 90 SEEADLK|EN 0.058 . PVX_082780 103 SLGQTDK|EH 0.062 . PVX_082780 119 SEGDLQR|ID 0.080 . PVX_082780 122 DLQRIDK|II 0.119 . PVX_082780 129 IIAQLSR|KE 0.073 . PVX_082780 130 IAQLSRK|EK 0.094 . PVX_082780 132 QLSRKEK|QP 0.201 . PVX_082780 162 ASLVCIR|TC 0.093 . PVX_082780 169 TCDSILK|KM 0.063 . PVX_082780 170 CDSILKK|MC 0.105 . PVX_082780 173 ILKKMCK|EE 0.060 . PVX_082780 179 KEENIFK|IV 0.073 . PVX_082780 193 VSNNLCK|LG 0.067 . PVX_082780 202 DALELLR|NL 0.076 . PVX_082780 213 NQGVMAK|AH 0.082 . PVX_082780 220 AHDALEK|LT 0.064 . PVX_082780 227 LTTYIDR|IN 0.088 . PVX_082780 239 QIYHFLK|KK 0.062 . PVX_082780 240 IYHFLKK|KY 0.160 . PVX_082780 241 YHFLKKK|YE 0.096 . PVX_082780 251 HAHQLDR|EH 0.108 . PVX_082780 272 NQGVHIK|DK 0.073 . PVX_082780 274 GVHIKDK|KQ 0.065 . PVX_082780 275 VHIKDKK|QR 0.091 . PVX_082780 277 IKDKKQR|RE 0.099 . PVX_082780 278 KDKKQRR|EY 0.176 . PVX_082780 282 QRREYLK|LQ 0.066 . PVX_082780 288 KLQAEEK|CI 0.068 . PVX_082780 309 DGVFIQK|GR 0.055 . PVX_082780 311 VFIQKGR|LL 0.088 . PVX_082780 327 IQNYQEK|IK 0.071 . PVX_082780 329 NYQEKIK|PF 0.069 . PVX_082780 336 PFIESGK|VK 0.060 . PVX_082780 338 IESGKVK|KK 0.078 . PVX_082780 339 ESGKVKK|KN 0.125 . PVX_082780 340 SGKVKKK|NT 0.165 . PVX_082780 343 VKKKNTR|EG 0.102 . PVX_082780 376 DEEVANR|AY 0.071 . PVX_082780 382 RAYALLR|KP 0.077 . PVX_082780 383 AYALLRK|PN 0.079 . PVX_082780 390 PNQTFLK|NI 0.060 . PVX_082780 399 LLLQYYR|NI 0.088 . PVX_082780 406 NILTQFR|NF 0.065 . PVX_082780 409 TQFRNFK|NF 0.112 . PVX_082780 417 FSEYSLK|NC 0.056 . PVX_082780 426 ILNSPEK|VH 0.059 . PVX_082780 433 VHYFLGK|VF 0.082 . PVX_082780 441 FNTVLPR|FL 0.106 . PVX_082780 447 RFLEELR|FV 0.125 . PVX_082780 451 ELRFVER|YI 0.118 . PVX_082780 459 IDAVSCR|GA 0.226 . PVX_082780 463 SCRGANK|EE 0.071 . PVX_082780 466 GANKEER|PS 0.122 . PVX_082780 483 VDGTPEK|VS 0.055 . PVX_082780 504 TTDGHPR|SG 0.202 . PVX_082780 511 SGDGGGR|RP 0.064 . PVX_082780 512 GDGGGRR|PK 0.114 . PVX_082780 514 GGGRRPK|LT 0.140 . PVX_082780 528 YYMNQIR|KE 0.074 . PVX_082780 529 YMNQIRK|EK 0.085 . PVX_082780 531 NQIRKEK|LK 0.115 . PVX_082780 533 IRKEKLK|QI 0.100 . PVX_082780 540 QIEAEMK|NR 0.057 . PVX_082780 542 EAEMKNR|LT 0.083 . PVX_082780 550 TLYQVIR|FV 0.188 . PVX_082780 557 FVVNILK|DS 0.067 . PVX_082780 581 WDESILK|FE 0.062 . PVX_082780 585 ILKFEIR|DG 0.120 . PVX_082780 601 YMDLFER|EN 0.067 . PVX_082780 604 LFERENK|SH 0.226 . PVX_082780 614 IAQYTVR|CS 0.089 . PVX_082780 617 YTVRCSK|NM 0.110 . PVX_082780 624 NMNACLK|HR 0.069 . PVX_082780 626 NACLKHR|WF 0.116 . PVX_082780 633 WFEEGAR|EC 0.068 . PVX_082780 644 FYAGIVR|GG 0.084 . PVX_082780 672 CASTGGR|PH 0.103 . PVX_082780 675 TGGRPHR|QT 0.422 . PVX_082780 679 PHRQTYR|QT 0.092 . PVX_082780 693 VCNFSTK|LS 0.068 . PVX_082780 723 IANSLGR|IK 0.087 . PVX_082780 725 NSLGRIK|MS 0.069 . PVX_082780 730 IKMSLDK|VN 0.054 . PVX_082780 758 QHLSGNR|GG 0.062 . PVX_082780 783 SYDALLR|LY 0.079 . PVX_082780 802 SDQTGEK|RE 0.060 . PVX_082780 803 DQTGEKR|EH 0.105 . PVX_082780 806 GEKREHR|ER 0.209 . PVX_082780 808 KREHRER|MV 0.186 . PVX_082780 811 HRERMVK|RY 0.106 . PVX_082780 812 RERMVKR|YL 0.323 . PVX_082780 817 KRYLESK|NI 0.063 . PVX_082780 844 FYCLSEK|SS 0.083 . PVX_082780 851 SSCISER|NE 0.093 . PVX_082780 857 RNELIEK|KI 0.061 . PVX_082780 858 NELIEKK|IK 0.078 . PVX_082780 860 LIEKKIK|EY 0.066 . PVX_082780 869 FSGVYYR|DI 0.160 . PVX_082780 884 PQIHFSK|TT 0.064 . PVX_082780 906 YCSVLSK|YV 0.091 . PVX_082780 911 SKYVWTR|TF 0.098 . PVX_082780 914 VWTRTFK|RD 0.081 . PVX_082780 915 WTRTFKR|DL 0.269 . PVX_082780 920 KRDLMNR|GK 0.106 . PVX_082780 922 DLMNRGK|AA 0.086 . PVX_082780 931 EIVNFMR|GG 0.082 . PVX_082780 940 SVDSSLR|NI 0.081 . PVX_082780 952 VEDDPEK|VQ 0.055 . PVX_082780 977 HYSGENK|AE 0.061 . ____________________________^_________________

  • Fasta :-

    >PVX_082780 ATGAAGCGCAGGCCGTGCCAGCTGGTCCAGGCGGTGTGCAATGTGGCGACGCTTGAGGGT ATAAACTGGTGCGCTACTCCTAGAAAACTTCGTGGCACCCTTTTGAGCGGATTCCCCGGG GGGACATCCCGGAGGAATTTCTTCTTCAAAAAGGAGAGCGACAAAATAGGAGGAGCGGCC AATTTGCTGGCAAAACTAAATTTAAAAAATTTCGTGAAAAAAGGAAGAAATGGGGGAGGG ATAACCTGCTCGGAGGAGGCGGATCTGAAGGAGAACTGTTCTAGTCAATCGTTAGGCCAA ACCGATAAGGAGCACCTTCAAGATGTAGACACGCTAAGCGAAGGAGACCTACAAAGAATA GATAAAATCATTGCACAGTTAAGCAGAAAGGAAAAGCAGCCAAATGGAGAGGGACACCTA CTAGAACTGATAGGATTGCAAAGCGACGGAGATAACATCCCCCAAGCCAGCCTCGTCTGC ATACGTACATGCGATAGTATATTAAAAAAAATGTGCAAAGAGGAAAACATCTTCAAAATT GTTAACATGGTAGATACAGTTTCAAATAATTTATGCAAATTAGGAGACGCGCTGGAACTG CTCAGGAATTTACACACAAACCAGGGGGTGATGGCCAAGGCACATGACGCGCTGGAGAAG CTAACCACCTACATAGACAGAATTAACATTGACGAGCAAATTTACCATTTTTTAAAAAAA AAATATGAGCAACATGCACATCAGTTAGATCGGGAGCATGCGGAAGTTCTGCTCAACATG ATCGTGTCCATGGAAAACCAAGGGGTACACATAAAGGATAAGAAGCAAAGACGAGAATAT TTAAAACTCCAGGCAGAGGAAAAATGCATCTCCTTTCATGCTGCATCGAATGTGGCAAAT GAATACGACGGGGTGTTCATACAAAAGGGGAGACTCCTTCCCTTCATCGATGAGCAGGTC ATACAGAACTACCAGGAAAAAATAAAACCTTTTATTGAAAGTGGAAAAGTAAAAAAGAAA AACACGCGTGAGGGATTCGACTCAAACGAGTGGGTATTCCTCCTCCAGGACAGCTCCTTC ATCATGACGGTGCTGGAAAATGTCAACGATGAAGAGGTAGCAAATAGGGCTTATGCACTA CTGAGGAAGCCAAACCAGACGTTCCTAAAAAATATCCTCCTGCTGCAGTACTATAGAAAT ATTCTAACCCAGTTTAGAAATTTTAAAAACTTCAGTGAGTACTCTCTAAAAAATTGCATC CTGAACAGCCCCGAGAAGGTGCACTATTTTTTGGGGAAAGTTTTTAACACCGTTTTGCCC CGATTTCTGGAAGAGCTGCGGTTCGTGGAGAGGTACATCGACGCGGTTTCGTGTAGAGGG GCCAACAAGGAGGAGAGGCCATCCGGAGGGACTACCTTACACAGTGCTGTTGACGGCACC CCAGAAAAGGTCTCACAAAATACCGTAGAGATCTCCACACAGCCGTTTAACACAACTGAT GGCCACCCCCGCAGCGGGGACGGAGGAGGGAGGCGCCCCAAGCTAACCCCCCAAAATGTA TTCTACTACATGAACCAAATACGGAAGGAGAAGCTCAAACAGATCGAGGCGGAAATGAAA AACCGATTGACTCTGTACCAGGTCATTCGCTTTGTCGTGAACATACTGAAAGATTCCTAC GCCTTGGAGATGGCGAACGTTGCGCCGTTGCCGAACGAACTGTGGGACGAGAGCATATTA AAATTTGAGATACGGGACGGGAGCCACACCTACGGGTACTTATATATGGACCTGTTCGAG CGGGAGAACAAGAGCCACTCAATTGCTCAGTACACCGTTCGGTGCTCCAAAAATATGAAC GCCTGCTTGAAGCACCGGTGGTTTGAGGAGGGCGCGCGCGAGTGTCCGTTCTTCTACGCG GGCATCGTGCGGGGAGGCGCAAACAGCGATACGGGAAGCGATAGCGGCAGCGATACGACC GACGGCACACCCAACTGCGCATCAACTGGGGGGCGGCCCCACCGACAAACCTACCGACAA ACCACGTCGACCTTCCTTGTGTGCAACTTCAGCACAAAATTGAGCGCCGCCGAGGGAGCA GCCCCCGCGAGTCACCCCCCACAGGATAACATCTTCATAAATGAGCAAATAGCCAACTCA CTTGGAAGAATAAAAATGTCCCTCGACAAGGTCAACATGTTTCTGCACGAATTTGGGCAC ACCCTCCACTGCATACTGAGCTCCACATATCTGCAGCATCTGTCTGGAAATAGGGGGGGC GTAGACTTCTCAGAATTCACGTCTCACTTTTTTGAGGAGTATTTGAACAGCTACGATGCG TTGTTGCGGCTGTACGGCGGGGATGGAGCAGAGCCGGGGGGGGGCAGCGATCAGACGGGG GAGAAACGCGAACATAGGGAGCGCATGGTGAAACGCTATTTGGAAAGCAAAAACATCCTC TGTTACTACTCCATCATGCAGGTGACGATTCAGTCGATCATTGACCAGATTTTTTATTGC CTGTCGGAAAAGTCCAGCTGCATTTCTGAGCGAAATGAATTAATTGAAAAGAAAATAAAG GAGTACTTCTCCGGGGTGTATTACAGGGACATATTTATACTGGAGTTATTTCCACAGATT CATTTTTCCAAAACGACACACCTCGTTCATTATCCTGCCAATTATTTCTGCTACCTGTAC TGCTCCGTGTTATCCAAATATGTTTGGACGCGGACGTTCAAGCGGGATTTGATGAATCGG GGGAAGGCCGCCGAAATTGTGAACTTTATGCGCGGGGGCTCGGTCGACTCGAGCTTAAGA AACATCATTGCACTGGTGGAGGATGACCCGGAGAAGGTTCAGTACTACACGGAAAATCCG CAACACCTGCCACTTGAGGACTTTTTGGAGCATTACTCGGGTGAAAACAAGGCCGAGGAG TACAACTCCTTTTTGGAGGCCCTCTAA
  • Download Fasta

  • Fasta :-

    MKRRPCQLVQAVCNVATLEGINWCATPRKLRGTLLSGFPGGTSRRNFFFKKESDKIGGAA NLLAKLNLKNFVKKGRNGGGITCSEEADLKENCSSQSLGQTDKEHLQDVDTLSEGDLQRI DKIIAQLSRKEKQPNGEGHLLELIGLQSDGDNIPQASLVCIRTCDSILKKMCKEENIFKI VNMVDTVSNNLCKLGDALELLRNLHTNQGVMAKAHDALEKLTTYIDRINIDEQIYHFLKK KYEQHAHQLDREHAEVLLNMIVSMENQGVHIKDKKQRREYLKLQAEEKCISFHAASNVAN EYDGVFIQKGRLLPFIDEQVIQNYQEKIKPFIESGKVKKKNTREGFDSNEWVFLLQDSSF IMTVLENVNDEEVANRAYALLRKPNQTFLKNILLLQYYRNILTQFRNFKNFSEYSLKNCI LNSPEKVHYFLGKVFNTVLPRFLEELRFVERYIDAVSCRGANKEERPSGGTTLHSAVDGT PEKVSQNTVEISTQPFNTTDGHPRSGDGGGRRPKLTPQNVFYYMNQIRKEKLKQIEAEMK NRLTLYQVIRFVVNILKDSYALEMANVAPLPNELWDESILKFEIRDGSHTYGYLYMDLFE RENKSHSIAQYTVRCSKNMNACLKHRWFEEGARECPFFYAGIVRGGANSDTGSDSGSDTT DGTPNCASTGGRPHRQTYRQTTSTFLVCNFSTKLSAAEGAAPASHPPQDNIFINEQIANS LGRIKMSLDKVNMFLHEFGHTLHCILSSTYLQHLSGNRGGVDFSEFTSHFFEEYLNSYDA LLRLYGGDGAEPGGGSDQTGEKREHRERMVKRYLESKNILCYYSIMQVTIQSIIDQIFYC LSEKSSCISERNELIEKKIKEYFSGVYYRDIFILELFPQIHFSKTTHLVHYPANYFCYLY CSVLSKYVWTRTFKRDLMNRGKAAEIVNFMRGGSVDSSLRNIIALVEDDPEKVQYYTENP QHLPLEDFLEHYSGENKAEEYNSFLEAL

  • title: Zn binding site
  • coordinates: H736,H740,E765
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_082780655 STGSDSGSDT0.997unspPVX_082780655 STGSDSGSDT0.997unspPVX_082780655 STGSDSGSDT0.997unspPVX_082780677 TPHRQTYRQT0.993unspPVX_082780128 SIAQLSRKEK0.993unspPVX_082780468 SEERPSGGTT0.994unsp
PVX_082780      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India