PVX_084130 | conserved protein, unknown function

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_IDPredictionOTHERSPmTPCS_Position
PVX_084130OTHER0.9998450.0000040.000151
No Results

  • Fasta :-

    >PVX_084130 MCVRVYYNIDINVLKKKYNCKQILNNEKLRRGMINKKNYMPIIYESVENENGKGNKAPQK IKVIQVCLWGLKPYNYGKLDKEVLLINARVESLQSKKSFNVLINKNRCAVVVNGYFEWMD IKGSSKRIPYFVFFGKDDNSSEEVTEGKLETKVEELAVEKTEEKSEEKIIPSIKEEGVTI RIRVKQEIESDENNKGEIKKEEKDEEEEEEVKEEVKEEEEEESPSNEEESAIADRGAPKR KKEGKEKSKKKKIKTELPSEADLDEDDEEEKSHVIIAGLYSISNTDKKDCRYTIITTACE NSSLRDIHDRCPLLLSENTLGLWLDVEKKYEDIIESVKEEHQVVSNNLKFREVKSWTDYA TKSKRAKKAAKAAIAKQAKK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_084130.fa Sequence name : PVX_084130 Sequence length : 380 VALUES OF COMPUTED PARAMETERS Coef20 : 3.893 CoefTot : -2.872 ChDiff : -4 ZoneTo : 44 KR : 10 DE : 2 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : -0.265 0.653 -0.252 0.354 MesoH : -1.389 0.013 -0.601 0.077 MuHd_075 : 51.521 34.371 15.354 11.171 MuHd_095 : 25.861 18.969 9.634 6.653 MuHd_100 : 26.868 17.103 7.020 4.971 MuHd_105 : 29.227 20.818 8.515 5.765 Hmax_075 : 10.850 17.033 2.533 4.830 Hmax_095 : -0.700 9.188 0.577 3.299 Hmax_100 : 4.200 12.100 -1.151 1.870 Hmax_105 : 4.200 9.683 -0.601 3.663 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3521 0.6479 DFMC : 0.4661 0.5339 This protein is probably imported in mitochondria. f(Ser) = 0.0000 f(Arg) = 0.0682 CMi = 0.00000 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 380 PVX_084130 MCVRVYYNIDINVLKKKYNCKQILNNEKLRRGMINKKNYMPIIYESVENENGKGNKAPQKIKVIQVCLWGLKPYNYGKLD 80 KEVLLINARVESLQSKKSFNVLINKNRCAVVVNGYFEWMDIKGSSKRIPYFVFFGKDDNSSEEVTEGKLETKVEELAVEK 160 TEEKSEEKIIPSIKEEGVTIRIRVKQEIESDENNKGEIKKEEKDEEEEEEVKEEVKEEEEEESPSNEEESAIADRGAPKR 240 KKEGKEKSKKKKIKTELPSEADLDEDDEEEKSHVIIAGLYSISNTDKKDCRYTIITTACENSSLRDIHDRCPLLLSENTL 320 GLWLDVEKKYEDIIESVKEEHQVVSNNLKFREVKSWTDYATKSKRAKKAAKAAIAKQAKK 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ...............................................P............ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PVX_084130 4 ---MCVR|VY 0.074 . PVX_084130 15 IDINVLK|KK 0.061 . PVX_084130 16 DINVLKK|KY 0.093 . PVX_084130 17 INVLKKK|YN 0.155 . PVX_084130 21 KKKYNCK|QI 0.071 . PVX_084130 28 QILNNEK|LR 0.056 . PVX_084130 30 LNNEKLR|RG 0.086 . PVX_084130 31 NNEKLRR|GM 0.144 . PVX_084130 36 RRGMINK|KN 0.065 . PVX_084130 37 RGMINKK|NY 0.104 . PVX_084130 53 VENENGK|GN 0.070 . PVX_084130 56 ENGKGNK|AP 0.065 . PVX_084130 60 GNKAPQK|IK 0.065 . PVX_084130 62 KAPQKIK|VI 0.070 . PVX_084130 72 VCLWGLK|PY 0.055 . PVX_084130 78 KPYNYGK|LD 0.065 . PVX_084130 81 NYGKLDK|EV 0.066 . PVX_084130 89 VLLINAR|VE 0.065 . PVX_084130 96 VESLQSK|KS 0.072 . PVX_084130 97 ESLQSKK|SF 0.114 . PVX_084130 105 FNVLINK|NR 0.059 . PVX_084130 107 VLINKNR|CA 0.105 . PVX_084130 122 FEWMDIK|GS 0.069 . PVX_084130 126 DIKGSSK|RI 0.057 . PVX_084130 127 IKGSSKR|IP 0.193 . PVX_084130 136 YFVFFGK|DD 0.075 . PVX_084130 148 EEVTEGK|LE 0.063 . PVX_084130 152 EGKLETK|VE 0.058 . PVX_084130 160 EELAVEK|TE 0.061 . PVX_084130 164 VEKTEEK|SE 0.085 . PVX_084130 168 EEKSEEK|II 0.059 . PVX_084130 174 KIIPSIK|EE 0.065 . PVX_084130 181 EEGVTIR|IR 0.095 . PVX_084130 183 GVTIRIR|VK 0.086 . PVX_084130 185 TIRIRVK|QE 0.065 . PVX_084130 195 ESDENNK|GE 0.063 . PVX_084130 199 NNKGEIK|KE 0.064 . PVX_084130 200 NKGEIKK|EE 0.119 . PVX_084130 203 EIKKEEK|DE 0.074 . PVX_084130 212 EEEEEVK|EE 0.056 . PVX_084130 216 EVKEEVK|EE 0.061 . PVX_084130 235 ESAIADR|GA 0.102 . PVX_084130 239 ADRGAPK|RK 0.062 . PVX_084130 240 DRGAPKR|KK 0.331 . PVX_084130 241 RGAPKRK|KE 0.112 . PVX_084130 242 GAPKRKK|EG 0.081 . PVX_084130 245 KRKKEGK|EK 0.094 . PVX_084130 247 KKEGKEK|SK 0.112 . PVX_084130 249 EGKEKSK|KK 0.061 . PVX_084130 250 GKEKSKK|KK 0.114 . PVX_084130 251 KEKSKKK|KI 0.187 . PVX_084130 252 EKSKKKK|IK 0.159 . PVX_084130 254 SKKKKIK|TE 0.092 . PVX_084130 271 EDDEEEK|SH 0.062 . PVX_084130 287 SISNTDK|KD 0.068 . PVX_084130 288 ISNTDKK|DC 0.135 . PVX_084130 291 TDKKDCR|YT 0.110 . PVX_084130 305 CENSSLR|DI 0.123 . PVX_084130 310 LRDIHDR|CP 0.073 . PVX_084130 328 LWLDVEK|KY 0.071 . PVX_084130 329 WLDVEKK|YE 0.117 . PVX_084130 338 DIIESVK|EE 0.061 . PVX_084130 349 VVSNNLK|FR 0.068 . PVX_084130 351 SNNLKFR|EV 0.177 . PVX_084130 354 LKFREVK|SW 0.246 . PVX_084130 362 WTDYATK|SK 0.073 . PVX_084130 364 DYATKSK|RA 0.067 . PVX_084130 365 YATKSKR|AK 0.199 . PVX_084130 367 TKSKRAK|KA 0.110 . PVX_084130 368 KSKRAKK|AA 0.525 *ProP* PVX_084130 371 RAKKAAK|AA 0.095 . PVX_084130 376 AKAAIAK|QA 0.085 . PVX_084130 379 AIAKQAK|K- 0.074 . PVX_084130 380 IAKQAKK|-- 0.103 . ____________________________^_________________

  • Fasta :-

    >PVX_084130 ATGTGTGTACGAGTATACTACAATATCGACATAAACGTTTTGAAAAAAAAGTACAACTGC AAGCAAATTCTGAACAATGAAAAATTAAGGAGAGGAATGATAAATAAGAAAAATTACATG CCCATTATCTACGAGAGCGTTGAAAATGAAAACGGAAAGGGAAACAAAGCCCCACAAAAA ATCAAAGTAATTCAAGTTTGCCTATGGGGACTAAAGCCATACAACTACGGAAAACTCGAC AAGGAAGTCCTTTTGATTAACGCCAGAGTGGAGAGCCTGCAGTCGAAGAAGTCGTTCAAC GTGCTGATCAATAAGAATCGATGCGCCGTTGTGGTTAACGGCTACTTCGAATGGATGGAC ATCAAGGGCTCCTCAAAAAGAATCCCATATTTTGTATTTTTTGGAAAGGATGACAATTCT TCTGAAGAAGTAACCGAAGGGAAACTCGAAACGAAAGTTGAGGAATTAGCCGTGGAAAAA ACGGAAGAAAAGAGCGAAGAGAAAATTATCCCCAGCATAAAGGAAGAGGGAGTGACCATT AGAATTAGGGTTAAGCAAGAAATCGAGTCGGACGAAAACAACAAAGGTGAAATTAAGAAG GAAGAGAAAGACGAAGAGGAAGAAGAGGAAGTAAAAGAGGAGGTAAAGGAGGAAGAGGAA GAAGAGTCCCCGAGCAATGAAGAAGAATCAGCGATAGCGGATAGGGGCGCTCCAAAAAGA AAAAAAGAAGGAAAGGAAAAGAGTAAGAAAAAAAAAATTAAAACAGAGCTACCCAGCGAA GCAGATCTAGATGAAGATGACGAGGAGGAGAAGTCCCATGTAATAATTGCAGGCCTTTAC AGCATCTCGAACACAGACAAAAAGGATTGCAGATACACCATAATTACTACCGCTTGCGAG AATTCCTCCCTGAGAGACATCCATGACAGATGCCCGCTTTTGCTGAGCGAAAACACCCTG GGCTTGTGGCTGGACGTGGAAAAAAAATACGAAGACATTATAGAAAGTGTCAAGGAGGAG CACCAAGTTGTTTCGAACAACTTAAAGTTTAGGGAAGTTAAGAGCTGGACTGATTATGCA ACCAAATCGAAAAGGGCCAAGAAGGCCGCCAAGGCAGCCATTGCAAAGCAGGCAAAGAAG TAA
  • Download Fasta

  • Fasta :-

    MCVRVYYNIDINVLKKKYNCKQILNNEKLRRGMINKKNYMPIIYESVENENGKGNKAPQK IKVIQVCLWGLKPYNYGKLDKEVLLINARVESLQSKKSFNVLINKNRCAVVVNGYFEWMD IKGSSKRIPYFVFFGKDDNSSEEVTEGKLETKVEELAVEKTEEKSEEKIIPSIKEEGVTI RIRVKQEIESDENNKGEIKKEEKDEEEEEEVKEEVKEEEEEESPSNEEESAIADRGAPKR KKEGKEKSKKKKIKTELPSEADLDEDDEEEKSHVIIAGLYSISNTDKKDCRYTIITTACE NSSLRDIHDRCPLLLSENTLGLWLDVEKKYEDIIESVKEEHQVVSNNLKFREVKSWTDYA TKSKRAKKAAKAAIAKQAKK

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_084130165 STEEKSEEKI0.991unspPVX_084130165 STEEKSEEKI0.991unspPVX_084130165 STEEKSEEKI0.991unspPVX_084130190 SQEIESDENN0.993unspPVX_084130223 SEEEESPSNE0.994unspPVX_084130225 SEESPSNEEE0.995unspPVX_084130259 STELPSEADL0.993unspPVX_084130355 SREVKSWTDY0.996unspPVX_084130140 SKDDNSSEEV0.994unspPVX_084130141 SDDNSSEEVT0.995unsp
PVX_084130      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India