PVX_085030 | aspartyl protease, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_085030OTHER0.7562410.1964530.047306
No Results

  • Fasta :-

    >PVX_085030 MPPNRLQKLGSKLLSTLLIHPTAPLLFVVHLFLFRQGSCLRPSATPRFATDLTWEEEANL EIPTCDACDVCSVCIHEKGASENIIPMMAIPSKRKYLQYKIGKLNSELLQNLPTKKLKKK KKKGSYSFFEGEDEDEGEEEQENEQDEQQQKEEEGDPPSDATMDNHISHHNKGTHYGGED HHPDEFPNCVNSDCHMSNDASAEPDYLGQFMNGSGEKARAQTQRSNWSNWNSWSGAFKKK EVSSTDQVTLPLQQLQDSQYVGYIQIGNPPQTIRPIFDTGSTNIWVVSTKCKDDTCLKVH RYNYKLSRSFRYYKPHTNLDIMFGTGIIQGVIGVETFRIGPFKVFNQPFGLVKREKRSEA KSNVFERINFEGIVGLAFPAMLSTGKTTIYENLMNTYKFSHNEFSIYIGKDNKHSALIFG GVERRFFEGDIYMFPVVREYYWEIQFDGLYIDHQKFCCDSSSIVYDMRKKKKKWKVQRNS FARKYLKKKTDLRDMSRVWHHRREGAEEDSEEEDPSGENLSGESLSGEDKHGERSTGGEV NPYGAHPERRGKGAHRRRRRRHRWRRHRSRVNRRGKDEKLKKNQNYLIFDSGTSFNSVPK SEIGYFFKVVPPKKCDDSNIDEVVASYPNLTYVINNMPFTLTPAQYLVRKSDMCKPAFME IEVSPEYGHAYILGNATFMRYYYTVYRRGDGRKGSYVGIAKAVHAEDNEEYLTALQRKMN PVG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_085030.fa Sequence name : PVX_085030 Sequence length : 723 VALUES OF COMPUTED PARAMETERS Coef20 : 3.833 CoefTot : -0.413 ChDiff : 11 ZoneTo : 50 KR : 6 DE : 0 CleavSite : 49 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.765 1.929 0.204 0.748 MesoH : -0.410 0.460 -0.259 0.220 MuHd_075 : 27.186 23.475 8.464 6.564 MuHd_095 : 34.592 24.803 11.184 8.762 MuHd_100 : 31.301 20.484 9.585 8.266 MuHd_105 : 28.839 15.191 8.105 6.924 Hmax_075 : 14.525 19.900 3.414 6.540 Hmax_095 : 17.800 18.200 3.898 6.300 Hmax_100 : 13.200 12.500 2.118 5.120 Hmax_105 : 13.200 12.500 2.118 4.950 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2420 0.7580 DFMC : 0.1880 0.8120 This protein is probably imported in mitochondria. f(Ser) = 0.0800 f(Arg) = 0.0800 CMi = 0.43956 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 723 PVX_085030 MPPNRLQKLGSKLLSTLLIHPTAPLLFVVHLFLFRQGSCLRPSATPRFATDLTWEEEANLEIPTCDACDVCSVCIHEKGA 80 SENIIPMMAIPSKRKYLQYKIGKLNSELLQNLPTKKLKKKKKKGSYSFFEGEDEDEGEEEQENEQDEQQQKEEEGDPPSD 160 ATMDNHISHHNKGTHYGGEDHHPDEFPNCVNSDCHMSNDASAEPDYLGQFMNGSGEKARAQTQRSNWSNWNSWSGAFKKK 240 EVSSTDQVTLPLQQLQDSQYVGYIQIGNPPQTIRPIFDTGSTNIWVVSTKCKDDTCLKVHRYNYKLSRSFRYYKPHTNLD 320 IMFGTGIIQGVIGVETFRIGPFKVFNQPFGLVKREKRSEAKSNVFERINFEGIVGLAFPAMLSTGKTTIYENLMNTYKFS 400 HNEFSIYIGKDNKHSALIFGGVERRFFEGDIYMFPVVREYYWEIQFDGLYIDHQKFCCDSSSIVYDMRKKKKKWKVQRNS 480 FARKYLKKKTDLRDMSRVWHHRREGAEEDSEEEDPSGENLSGESLSGEDKHGERSTGGEVNPYGAHPERRGKGAHRRRRR 560 RHRWRRHRSRVNRRGKDEKLKKNQNYLIFDSGTSFNSVPKSEIGYFFKVVPPKKCDDSNIDEVVASYPNLTYVINNMPFT 640 LTPAQYLVRKSDMCKPAFMEIEVSPEYGHAYILGNATFMRYYYTVYRRGDGRKGSYVGIAKAVHAEDNEEYLTALQRKMN 720 PVG 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ......................................................................P......... 320 ....................................P........................................... 400 ................................................................................ 480 ..............................................................................P. 560 P....P.......................................................................... 640 ................................................................................ 720 ... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 5 Name Pos Context Score Pred ____________________________v_________________ PVX_085030 5 --MPPNR|LQ 0.070 . PVX_085030 8 PPNRLQK|LG 0.186 . PVX_085030 12 LQKLGSK|LL 0.065 . PVX_085030 35 VHLFLFR|QG 0.075 . PVX_085030 41 RQGSCLR|PS 0.075 . PVX_085030 47 RPSATPR|FA 0.233 . PVX_085030 78 SVCIHEK|GA 0.081 . PVX_085030 93 MMAIPSK|RK 0.062 . PVX_085030 94 MAIPSKR|KY 0.183 . PVX_085030 95 AIPSKRK|YL 0.091 . PVX_085030 100 RKYLQYK|IG 0.061 . PVX_085030 103 LQYKIGK|LN 0.068 . PVX_085030 115 LQNLPTK|KL 0.070 . PVX_085030 116 QNLPTKK|LK 0.086 . PVX_085030 118 LPTKKLK|KK 0.069 . PVX_085030 119 PTKKLKK|KK 0.096 . PVX_085030 120 TKKLKKK|KK 0.124 . PVX_085030 121 KKLKKKK|KK 0.127 . PVX_085030 122 KLKKKKK|KG 0.153 . PVX_085030 123 LKKKKKK|GS 0.166 . PVX_085030 151 QDEQQQK|EE 0.064 . PVX_085030 172 HISHHNK|GT 0.134 . PVX_085030 217 MNGSGEK|AR 0.062 . PVX_085030 219 GSGEKAR|AQ 0.125 . PVX_085030 224 ARAQTQR|SN 0.205 . PVX_085030 238 SWSGAFK|KK 0.075 . PVX_085030 239 WSGAFKK|KE 0.102 . PVX_085030 240 SGAFKKK|EV 0.200 . PVX_085030 274 NPPQTIR|PI 0.122 . PVX_085030 290 IWVVSTK|CK 0.067 . PVX_085030 292 VVSTKCK|DD 0.076 . PVX_085030 298 KDDTCLK|VH 0.051 . PVX_085030 301 TCLKVHR|YN 0.099 . PVX_085030 305 VHRYNYK|LS 0.063 . PVX_085030 308 YNYKLSR|SF 0.138 . PVX_085030 311 KLSRSFR|YY 0.513 *ProP* PVX_085030 314 RSFRYYK|PH 0.113 . PVX_085030 338 IGVETFR|IG 0.070 . PVX_085030 343 FRIGPFK|VF 0.069 . PVX_085030 353 QPFGLVK|RE 0.060 . PVX_085030 354 PFGLVKR|EK 0.148 . PVX_085030 356 GLVKREK|RS 0.072 . PVX_085030 357 LVKREKR|SE 0.696 *ProP* PVX_085030 361 EKRSEAK|SN 0.084 . PVX_085030 367 KSNVFER|IN 0.160 . PVX_085030 386 AMLSTGK|TT 0.060 . PVX_085030 398 NLMNTYK|FS 0.072 . PVX_085030 410 FSIYIGK|DN 0.069 . PVX_085030 413 YIGKDNK|HS 0.062 . PVX_085030 424 IFGGVER|RF 0.086 . PVX_085030 425 FGGVERR|FF 0.184 . PVX_085030 438 YMFPVVR|EY 0.080 . PVX_085030 455 LYIDHQK|FC 0.067 . PVX_085030 468 SIVYDMR|KK 0.083 . PVX_085030 469 IVYDMRK|KK 0.073 . PVX_085030 470 VYDMRKK|KK 0.072 . PVX_085030 471 YDMRKKK|KK 0.494 . PVX_085030 472 DMRKKKK|KW 0.164 . PVX_085030 473 MRKKKKK|WK 0.145 . PVX_085030 475 KKKKKWK|VQ 0.071 . PVX_085030 478 KKWKVQR|NS 0.101 . PVX_085030 483 QRNSFAR|KY 0.127 . PVX_085030 484 RNSFARK|YL 0.152 . PVX_085030 487 FARKYLK|KK 0.068 . PVX_085030 488 ARKYLKK|KT 0.110 . PVX_085030 489 RKYLKKK|TD 0.086 . PVX_085030 493 KKKTDLR|DM 0.122 . PVX_085030 497 DLRDMSR|VW 0.086 . PVX_085030 502 SRVWHHR|RE 0.171 . PVX_085030 503 RVWHHRR|EG 0.128 . PVX_085030 530 SLSGEDK|HG 0.076 . PVX_085030 534 EDKHGER|ST 0.148 . PVX_085030 549 YGAHPER|RG 0.078 . PVX_085030 550 GAHPERR|GK 0.336 . PVX_085030 552 HPERRGK|GA 0.198 . PVX_085030 556 RGKGAHR|RR 0.073 . PVX_085030 557 GKGAHRR|RR 0.134 . PVX_085030 558 KGAHRRR|RR 0.113 . PVX_085030 559 GAHRRRR|RR 0.504 *ProP* PVX_085030 560 AHRRRRR|RH 0.388 . PVX_085030 561 HRRRRRR|HR 0.507 *ProP* PVX_085030 563 RRRRRHR|WR 0.287 . PVX_085030 565 RRRHRWR|RH 0.095 . PVX_085030 566 RRHRWRR|HR 0.677 *ProP* PVX_085030 568 HRWRRHR|SR 0.331 . PVX_085030 570 WRRHRSR|VN 0.121 . PVX_085030 573 HRSRVNR|RG 0.352 . PVX_085030 574 RSRVNRR|GK 0.280 . PVX_085030 576 RVNRRGK|DE 0.158 . PVX_085030 579 RRGKDEK|LK 0.065 . PVX_085030 581 GKDEKLK|KN 0.062 . PVX_085030 582 KDEKLKK|NQ 0.091 . PVX_085030 600 SFNSVPK|SE 0.087 . PVX_085030 608 EIGYFFK|VV 0.074 . PVX_085030 613 FKVVPPK|KC 0.073 . PVX_085030 614 KVVPPKK|CD 0.101 . PVX_085030 649 PAQYLVR|KS 0.086 . PVX_085030 650 AQYLVRK|SD 0.112 . PVX_085030 655 RKSDMCK|PA 0.090 . PVX_085030 680 GNATFMR|YY 0.143 . PVX_085030 687 YYYTVYR|RG 0.072 . PVX_085030 688 YYTVYRR|GD 0.153 . PVX_085030 692 YRRGDGR|KG 0.107 . PVX_085030 693 RRGDGRK|GS 0.111 . PVX_085030 701 SYVGIAK|AV 0.090 . PVX_085030 717 YLTALQR|KM 0.082 . PVX_085030 718 LTALQRK|MN 0.099 . ____________________________^_________________

  • Fasta :-

    >PVX_085030 ATGCCCCCCAACCGTTTGCAAAAACTGGGGAGCAAACTCCTCTCGACGTTGTTAATTCAC CCAACGGCACCCCTGCTGTTCGTAGTGCATCTTTTCCTTTTTAGACAAGGCAGTTGCCTA CGACCTAGTGCCACCCCCAGATTTGCGACGGACCTAACATGGGAGGAAGAGGCGAACTTG GAAATACCTACGTGTGACGCGTGCGATGTTTGTTCCGTGTGCATCCATGAGAAGGGGGCC TCTGAGAACATAATCCCCATGATGGCCATCCCCAGCAAGCGCAAATATCTTCAATACAAA ATTGGCAAACTAAATTCAGAGCTTCTGCAAAATTTACCTACCAAAAAATTGAAGAAAAAA AAGAAAAAAGGATCTTACAGTTTTTTTGAGGGGGAAGACGAAGACGAGGGGGAGGAGGAA CAGGAGAACGAGCAGGATGAGCAGCAGCAGAAGGAGGAGGAGGGAGATCCCCCTTCCGAC GCAACGATGGACAACCATATTTCCCATCATAACAAAGGGACCCATTACGGGGGGGAAGAC CATCACCCCGATGAGTTTCCAAATTGCGTCAATTCTGACTGTCACATGAGTAACGATGCT TCTGCAGAGCCTGATTACCTTGGGCAGTTTATGAATGGCTCGGGGGAGAAGGCCCGGGCA CAGACACAGCGGAGCAATTGGAGCAACTGGAACAGTTGGAGCGGCGCGTTTAAGAAGAAG GAGGTTTCCTCTACCGACCAAGTGACCCTGCCCCTGCAGCAGTTGCAAGATAGCCAATAC GTCGGGTACATCCAAATAGGCAACCCGCCGCAAACGATCAGACCCATTTTTGACACCGGG AGCACGAACATCTGGGTCGTGAGCACCAAGTGCAAGGATGACACCTGTCTGAAGGTGCAC CGGTACAACTACAAGTTGTCTAGGAGCTTCCGCTACTACAAGCCGCACACGAATCTGGAC ATCATGTTCGGCACGGGAATAATCCAAGGCGTGATCGGCGTGGAAACCTTCCGCATAGGG CCCTTCAAGGTGTTCAACCAACCCTTCGGACTCGTAAAGCGCGAGAAAAGGAGCGAAGCA AAATCAAACGTCTTCGAAAGAATCAACTTCGAAGGCATAGTCGGGTTGGCATTCCCAGCA ATGCTATCCACAGGAAAAACAACCATCTATGAAAACCTAATGAACACTTATAAGTTCAGC CATAACGAGTTCTCTATATACATAGGAAAGGACAACAAGCACTCAGCTTTAATCTTCGGA GGAGTGGAGAGACGCTTTTTCGAGGGAGACATTTACATGTTCCCAGTGGTGAGGGAATAC TACTGGGAAATACAATTTGATGGACTGTACATCGATCACCAGAAATTTTGTTGCGACTCT AGTTCTATTGTGTACGATATGAGGAAGAAAAAGAAAAAATGGAAAGTGCAGAGAAATTCC TTTGCGAGGAAATACTTGAAAAAAAAAACGGACTTGAGGGACATGTCCAGGGTGTGGCAC CACCGTCGGGAAGGCGCAGAAGAAGACTCAGAGGAGGAAGACCCATCGGGGGAAAACCTC TCCGGGGAAAGCCTCTCTGGGGAGGACAAACATGGAGAGCGTTCCACCGGGGGCGAAGTG AACCCGTATGGCGCTCACCCGGAAAGGCGCGGTAAAGGGGCACACCGCCGACGGCGCAGG CGACACAGGTGGAGAAGACACCGCAGCAGAGTCAACCGGCGAGGCAAGGACGAGAAATTA AAGAAAAACCAAAACTACCTCATCTTCGATTCTGGGACCTCCTTCAATAGTGTCCCCAAG TCGGAGATCGGGTACTTCTTCAAGGTCGTCCCGCCGAAGAAATGTGACGACAGCAACATA GACGAAGTAGTGGCGAGTTACCCCAACCTGACCTACGTCATTAACAACATGCCCTTTACG CTGACGCCGGCGCAGTACCTGGTCCGGAAGTCCGACATGTGCAAGCCGGCGTTCATGGAA ATCGAGGTTTCGCCTGAATATGGCCACGCGTACATTTTGGGGAACGCGACCTTCATGCGA TACTACTACACCGTTTACCGGCGCGGTGATGGGCGCAAGGGCTCCTACGTGGGCATTGCC AAGGCAGTGCACGCGGAAGACAATGAGGAGTACCTGACTGCCCTGCAGAGAAAGATGAAC CCGGTGGGGTAG
  • Download Fasta

  • Fasta :-

    MPPNRLQKLGSKLLSTLLIHPTAPLLFVVHLFLFRQGSCLRPSATPRFATDLTWEEEANL EIPTCDACDVCSVCIHEKGASENIIPMMAIPSKRKYLQYKIGKLNSELLQNLPTKKLKKK KKKGSYSFFEGEDEDEGEEEQENEQDEQQQKEEEGDPPSDATMDNHISHHNKGTHYGGED HHPDEFPNCVNSDCHMSNDASAEPDYLGQFMNGSGEKARAQTQRSNWSNWNSWSGAFKKK EVSSTDQVTLPLQQLQDSQYVGYIQIGNPPQTIRPIFDTGSTNIWVVSTKCKDDTCLKVH RYNYKLSRSFRYYKPHTNLDIMFGTGIIQGVIGVETFRIGPFKVFNQPFGLVKREKRSEA KSNVFERINFEGIVGLAFPAMLSTGKTTIYENLMNTYKFSHNEFSIYIGKDNKHSALIFG GVERRFFEGDIYMFPVVREYYWEIQFDGLYIDHQKFCCDSSSIVYDMRKKKKKWKVQRNS FARKYLKKKTDLRDMSRVWHHRREGAEEDSEEEDPSGENLSGESLSGEDKHGERSTGGEV NPYGAHPERRGKGAHRRRRRRHRWRRHRSRVNRRGKDEKLKKNQNYLIFDSGTSFNSVPK SEIGYFFKVVPPKKCDDSNIDEVVASYPNLTYVINNMPFTLTPAQYLVRKSDMCKPAFME IEVSPEYGHAYILGNATFMRYYYTVYRRGDGRKGSYVGIAKAVHAEDNEEYLTALQRKMN PVG

  • title: Active site flap
  • coordinates: D320,I321,M322,F323,I327,I328,Q329,G330
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_085030526 SGESLSGEDK0.996unspPVX_085030526 SGESLSGEDK0.996unspPVX_085030526 SGESLSGEDK0.996unspPVX_085030618 SKCDDSNIDE0.994unspPVX_085030243 SKKEVSSTDQ0.997unspPVX_085030510 SAEEDSEEED0.997unsp
PVX_085030      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India