_IDPredictionOTHERSPmTPCS_Position
PVX_085890OTHER1.0000000.0000000.000000
No Results
  • Fasta :-

    >PVX_085890 MENNKSGENAKAFLDSKDKRGKMDDDDDDDDKKKKHDKDKQNGNNKSSAGAAHRKKDGKD NNTKRSGNDNARGQPNGGGRNSDKSGDAKAGGAADDSNPNNDSAPPIDSSPPVASSPPIT SNPPITSNVAKKRERKSNSISLSDTSARRSKDKGDRAHHKLKHKQGSAESAERRKRDAKN VKYVNDANDANSAEKAKHEHGEEEEEEEEDDDDDEEEDDDEEDDDDEEEDDDDDEDDEDE EEDDDDEEDEEKRKNKDINKTHTRKKEKHRKSELLNLDSSNTVQFYNLLNGKNKEKEDNN SSSKKERYRSSNLKKEKKLKMSHTYEEFLSDHHDYTSLKVNYKINKKSHYDKTKKRPHMS ISINENKERTLNKSSICTDNAKFLNFLNDNEKNAHYYKNRKRFESRRRKQKIANIKIKEK NETKETLDYYILNVNEKNKYNEIMSSENVDKVKMPLKHPPGKKTDEAYVSELQDAEQKQQ MKDEERQKNYASTVEEEKKIIKEKSKVKSSIQCNRRFFIFQKKTLRKRKEKIIIFLNHNY SACENGQFNDHFYKTIHKNDLENLEEERIYIDNNKENTIKKIIYRIFPQFSIFSLILYVT FIQWVIFILLISVKSDFTLTPSNDSLKNFGSNFPHNIFKKAEFYRLFTALFLHSNFNHIC ANTYVQLTVGFLLEYLYGTYVVFLVYVFTGIFGIILSSPLTYCYSTTESSSSSSGIIGIF FSEILMMTNFNVDKISISVHLFCFFLLLLFLKFSLNTVSINIYSHFFGFLGGFLIGIILK RNQLKYFLKNNLLIQILSLVFLIVSLAAAIFISTYVVQSCPN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_085890.fa Sequence name : PVX_085890 Sequence length : 822 VALUES OF COMPUTED PARAMETERS Coef20 : 3.297 CoefTot : 0.000 ChDiff : -4 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.482 3.000 0.543 0.951 MesoH : 1.194 1.495 0.117 0.577 MuHd_075 : 10.202 6.004 3.149 0.735 MuHd_095 : 10.470 5.950 1.350 1.416 MuHd_100 : 17.388 7.134 4.081 2.178 MuHd_105 : 29.779 10.874 7.600 3.615 Hmax_075 : -11.200 -0.817 -5.124 -0.257 Hmax_095 : -15.137 -5.950 -7.465 -1.033 Hmax_100 : -3.900 -0.200 -3.626 0.940 Hmax_105 : -3.900 0.700 -3.626 1.307 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9949 0.0051 DFMC : 0.9889 0.0111
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 822 PVX_085890 MENNKSGENAKAFLDSKDKRGKMDDDDDDDDKKKKHDKDKQNGNNKSSAGAAHRKKDGKDNNTKRSGNDNARGQPNGGGR 80 NSDKSGDAKAGGAADDSNPNNDSAPPIDSSPPVASSPPITSNPPITSNVAKKRERKSNSISLSDTSARRSKDKGDRAHHK 160 LKHKQGSAESAERRKRDAKNVKYVNDANDANSAEKAKHEHGEEEEEEEEDDDDDEEEDDDEEDDDDEEEDDDDDEDDEDE 240 EEDDDDEEDEEKRKNKDINKTHTRKKEKHRKSELLNLDSSNTVQFYNLLNGKNKEKEDNNSSSKKERYRSSNLKKEKKLK 320 MSHTYEEFLSDHHDYTSLKVNYKINKKSHYDKTKKRPHMSISINENKERTLNKSSICTDNAKFLNFLNDNEKNAHYYKNR 400 KRFESRRRKQKIANIKIKEKNETKETLDYYILNVNEKNKYNEIMSSENVDKVKMPLKHPPGKKTDEAYVSELQDAEQKQQ 480 MKDEERQKNYASTVEEEKKIIKEKSKVKSSIQCNRRFFIFQKKTLRKRKEKIIIFLNHNYSACENGQFNDHFYKTIHKND 560 LENLEEERIYIDNNKENTIKKIIYRIFPQFSIFSLILYVTFIQWVIFILLISVKSDFTLTPSNDSLKNFGSNFPHNIFKK 640 AEFYRLFTALFLHSNFNHICANTYVQLTVGFLLEYLYGTYVVFLVYVFTGIFGIILSSPLTYCYSTTESSSSSSGIIGIF 720 FSEILMMTNFNVDKISISVHLFCFFLLLLFLKFSLNTVSINIYSHFFGFLGGFLIGIILKRNQLKYFLKNNLLIQILSLV 800 FLIVSLAAAIFISTYVVQSCPN 880 ................................................................................ 80 .......................................................P........................ 160 ...............P................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ...................... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ PVX_085890 5 --MENNK|SG 0.072 . PVX_085890 11 KSGENAK|AF 0.069 . PVX_085890 17 KAFLDSK|DK 0.067 . PVX_085890 19 FLDSKDK|RG 0.054 . PVX_085890 20 LDSKDKR|GK 0.276 . PVX_085890 22 SKDKRGK|MD 0.071 . PVX_085890 32 DDDDDDK|KK 0.054 . PVX_085890 33 DDDDDKK|KK 0.090 . PVX_085890 34 DDDDKKK|KH 0.089 . PVX_085890 35 DDDKKKK|HD 0.124 . PVX_085890 38 KKKKHDK|DK 0.086 . PVX_085890 40 KKHDKDK|QN 0.094 . PVX_085890 46 KQNGNNK|SS 0.083 . PVX_085890 54 SAGAAHR|KK 0.098 . PVX_085890 55 AGAAHRK|KD 0.108 . PVX_085890 56 GAAHRKK|DG 0.136 . PVX_085890 59 HRKKDGK|DN 0.101 . PVX_085890 64 GKDNNTK|RS 0.061 . PVX_085890 65 KDNNTKR|SG 0.370 . PVX_085890 72 SGNDNAR|GQ 0.109 . PVX_085890 80 QPNGGGR|NS 0.150 . PVX_085890 84 GGRNSDK|SG 0.111 . PVX_085890 89 DKSGDAK|AG 0.095 . PVX_085890 131 ITSNVAK|KR 0.083 . PVX_085890 132 TSNVAKK|RE 0.133 . PVX_085890 133 SNVAKKR|ER 0.156 . PVX_085890 135 VAKKRER|KS 0.077 . PVX_085890 136 AKKRERK|SN 0.527 *ProP* PVX_085890 148 LSDTSAR|RS 0.103 . PVX_085890 149 SDTSARR|SK 0.285 . PVX_085890 151 TSARRSK|DK 0.328 . PVX_085890 153 ARRSKDK|GD 0.086 . PVX_085890 156 SKDKGDR|AH 0.094 . PVX_085890 160 GDRAHHK|LK 0.088 . PVX_085890 162 RAHHKLK|HK 0.080 . PVX_085890 164 HHKLKHK|QG 0.069 . PVX_085890 173 SAESAER|RK 0.080 . PVX_085890 174 AESAERR|KR 0.160 . PVX_085890 175 ESAERRK|RD 0.077 . PVX_085890 176 SAERRKR|DA 0.720 *ProP* PVX_085890 179 RRKRDAK|NV 0.282 . PVX_085890 182 RDAKNVK|YV 0.108 . PVX_085890 195 DANSAEK|AK 0.070 . PVX_085890 197 NSAEKAK|HE 0.094 . PVX_085890 252 DEEDEEK|RK 0.055 . PVX_085890 253 EEDEEKR|KN 0.156 . PVX_085890 254 EDEEKRK|NK 0.083 . PVX_085890 256 EEKRKNK|DI 0.259 . PVX_085890 260 KNKDINK|TH 0.059 . PVX_085890 264 INKTHTR|KK 0.124 . PVX_085890 265 NKTHTRK|KE 0.067 . PVX_085890 266 KTHTRKK|EK 0.113 . PVX_085890 268 HTRKKEK|HR 0.070 . PVX_085890 270 RKKEKHR|KS 0.099 . PVX_085890 271 KKEKHRK|SE 0.125 . PVX_085890 292 YNLLNGK|NK 0.061 . PVX_085890 294 LLNGKNK|EK 0.081 . PVX_085890 296 NGKNKEK|ED 0.061 . PVX_085890 304 DNNSSSK|KE 0.056 . PVX_085890 305 NNSSSKK|ER 0.111 . PVX_085890 307 SSSKKER|YR 0.190 . PVX_085890 309 SKKERYR|SS 0.120 . PVX_085890 314 YRSSNLK|KE 0.068 . PVX_085890 315 RSSNLKK|EK 0.136 . PVX_085890 317 SNLKKEK|KL 0.068 . PVX_085890 318 NLKKEKK|LK 0.087 . PVX_085890 320 KKEKKLK|MS 0.088 . PVX_085890 339 HDYTSLK|VN 0.063 . PVX_085890 343 SLKVNYK|IN 0.065 . PVX_085890 346 VNYKINK|KS 0.061 . PVX_085890 347 NYKINKK|SH 0.108 . PVX_085890 352 KKSHYDK|TK 0.077 . PVX_085890 354 SHYDKTK|KR 0.065 . PVX_085890 355 HYDKTKK|RP 0.085 . PVX_085890 356 YDKTKKR|PH 0.164 . PVX_085890 367 ISINENK|ER 0.058 . PVX_085890 369 INENKER|TL 0.101 . PVX_085890 373 KERTLNK|SS 0.084 . PVX_085890 382 ICTDNAK|FL 0.066 . PVX_085890 392 FLNDNEK|NA 0.065 . PVX_085890 398 KNAHYYK|NR 0.062 . PVX_085890 400 AHYYKNR|KR 0.093 . PVX_085890 401 HYYKNRK|RF 0.072 . PVX_085890 402 YYKNRKR|FE 0.218 . PVX_085890 406 RKRFESR|RR 0.110 . PVX_085890 407 KRFESRR|RK 0.158 . PVX_085890 408 RFESRRR|KQ 0.102 . PVX_085890 409 FESRRRK|QK 0.312 . PVX_085890 411 SRRRKQK|IA 0.289 . PVX_085890 416 QKIANIK|IK 0.074 . PVX_085890 418 IANIKIK|EK 0.081 . PVX_085890 420 NIKIKEK|NE 0.062 . PVX_085890 424 KEKNETK|ET 0.059 . PVX_085890 437 ILNVNEK|NK 0.069 . PVX_085890 439 NVNEKNK|YN 0.073 . PVX_085890 451 SSENVDK|VK 0.064 . PVX_085890 453 ENVDKVK|MP 0.069 . PVX_085890 457 KVKMPLK|HP 0.060 . PVX_085890 462 LKHPPGK|KT 0.091 . PVX_085890 463 KHPPGKK|TD 0.102 . PVX_085890 478 LQDAEQK|QQ 0.061 . PVX_085890 482 EQKQQMK|DE 0.073 . PVX_085890 486 QMKDEER|QK 0.080 . PVX_085890 488 KDEERQK|NY 0.059 . PVX_085890 498 STVEEEK|KI 0.062 . PVX_085890 499 TVEEEKK|II 0.099 . PVX_085890 502 EEKKIIK|EK 0.068 . PVX_085890 504 KKIIKEK|SK 0.090 . PVX_085890 506 IIKEKSK|VK 0.071 . PVX_085890 508 KEKSKVK|SS 0.091 . PVX_085890 515 SSIQCNR|RF 0.089 . PVX_085890 516 SIQCNRR|FF 0.187 . PVX_085890 522 RFFIFQK|KT 0.064 . PVX_085890 523 FFIFQKK|TL 0.084 . PVX_085890 526 FQKKTLR|KR 0.071 . PVX_085890 527 QKKTLRK|RK 0.094 . PVX_085890 528 KKTLRKR|KE 0.131 . PVX_085890 529 KTLRKRK|EK 0.246 . PVX_085890 531 LRKRKEK|II 0.173 . PVX_085890 554 FNDHFYK|TI 0.071 . PVX_085890 558 FYKTIHK|ND 0.055 . PVX_085890 568 ENLEEER|IY 0.074 . PVX_085890 575 IYIDNNK|EN 0.059 . PVX_085890 580 NKENTIK|KI 0.062 . PVX_085890 581 KENTIKK|II 0.170 . PVX_085890 585 IKKIIYR|IF 0.080 . PVX_085890 614 ILLISVK|SD 0.077 . PVX_085890 627 PSNDSLK|NF 0.077 . PVX_085890 639 FPHNIFK|KA 0.080 . PVX_085890 640 PHNIFKK|AE 0.127 . PVX_085890 645 KKAEFYR|LF 0.118 . PVX_085890 734 TNFNVDK|IS 0.064 . PVX_085890 752 LLLLFLK|FS 0.056 . PVX_085890 780 LIGIILK|RN 0.054 . PVX_085890 781 IGIILKR|NQ 0.122 . PVX_085890 785 LKRNQLK|YF 0.071 . PVX_085890 789 QLKYFLK|NN 0.060 . ____________________________^_________________
  • Fasta :-

    >PVX_085890 ATGGAAAACAACAAATCTGGCGAAAATGCAAAAGCCTTTCTGGACTCAAAGGATAAGAGA GGGAAAATGGATGACGATGACGACGACGATGATAAAAAAAAGAAACACGATAAGGACAAG CAAAACGGTAATAATAAAAGTAGCGCCGGGGCAGCCCACCGGAAGAAAGATGGCAAGGAC AATAATACGAAACGCAGCGGGAACGACAACGCTAGGGGCCAGCCGAACGGCGGAGGCAGA AATAGTGATAAAAGCGGCGACGCGAAAGCGGGTGGCGCCGCGGACGATTCCAACCCCAAT AATGACTCTGCCCCTCCGATAGACTCCAGCCCCCCAGTGGCGTCTTCCCCCCCCATCACT TCCAACCCGCCGATCACCTCCAACGTTGCGAAGAAGAGGGAGCGCAAAAGCAACAGCATT TCGCTGAGCGACACCAGCGCGAGGCGCTCGAAGGACAAGGGCGACAGGGCGCACCACAAA CTCAAGCACAAGCAGGGGAGCGCGGAAAGTGCGGAGCGGAGAAAAAGGGACGCAAAAAAT GTGAAATATGTGAATGACGCGAATGACGCGAATAGCGCGGAGAAGGCGAAACACGAACAC GGGGAGGAAGAAGAGGAAGAAGAGGAGGACGACGATGACGACGAAGAGGAGGACGATGAT GAAGAAGACGATGATGATGAAGAAGAAGATGACGATGATGATGAAGACGATGAGGATGAG GAGGAAGACGATGATGACGAGGAAGATGAAGAAAAAAGAAAAAATAAAGACATTAATAAG ACCCATACTAGAAAAAAAGAAAAGCATCGAAAAAGTGAATTACTCAATCTGGATAGCAGC AACACAGTCCAATTTTACAATTTACTAAATGGTAAAAATAAAGAAAAAGAAGATAACAAT AGCAGTTCAAAGAAAGAAAGATACCGAAGTAGCAATTTAAAAAAGGAAAAAAAATTAAAA ATGAGTCATACATATGAAGAGTTCCTATCGGATCATCATGATTATACGTCATTAAAGGTA AATTATAAAATTAACAAAAAAAGTCATTATGATAAGACCAAAAAGAGACCACATATGTCT ATATCTATAAATGAAAATAAGGAGCGTACTTTAAATAAGAGCAGCATCTGTACAGATAAT GCAAAATTTTTAAACTTCCTAAATGATAATGAGAAGAATGCTCATTATTATAAGAATCGA AAACGATTCGAGAGTAGACGAAGAAAGCAAAAAATAGCAAATATAAAAATAAAAGAAAAA AATGAAACCAAAGAAACGTTAGATTATTACATACTAAACGTGAATGAGAAGAATAAATAT AACGAAATAATGTCTAGCGAAAATGTAGATAAAGTCAAAATGCCGCTAAAACATCCTCCT GGCAAAAAAACGGATGAGGCGTACGTAAGCGAATTACAAGATGCTGAACAGAAGCAACAA ATGAAGGACGAAGAACGACAAAAGAATTACGCAAGTACCGTTGAAGAGGAAAAAAAAATT ATAAAAGAAAAAAGCAAAGTTAAATCGTCCATACAATGTAACCGAAGATTTTTTATATTC CAAAAAAAAACGTTAAGAAAAAGAAAGGAAAAAATTATTATTTTTTTAAATCATAATTAT TCTGCCTGTGAAAATGGACAATTTAATGACCATTTTTACAAAACCATTCATAAAAATGAT TTGGAAAATTTAGAAGAAGAAAGAATTTACATTGACAATAATAAGGAAAATACAATAAAG AAAATTATCTACAGAATATTTCCACAGTTTTCCATTTTCAGTTTAATCCTCTACGTTACT TTCATCCAGTGGGTAATATTCATTCTGCTTATATCCGTCAAATCTGATTTTACCTTAACC CCATCAAACGATTCGTTAAAAAATTTTGGAAGCAATTTCCCACACAATATTTTTAAGAAG GCCGAGTTTTATCGCCTCTTCACAGCGCTATTTTTACATTCGAATTTTAACCACATTTGT GCAAATACATATGTTCAGTTAACCGTCGGATTTTTGTTAGAATATCTGTATGGGACATAT GTTGTTTTTTTAGTATACGTGTTTACCGGCATTTTTGGAATAATTTTATCCTCCCCCCTA ACGTACTGCTACTCGACCACCGAAAGCAGTAGCAGCTCCTCAGGAATTATTGGAATTTTT TTTTCAGAAATTTTAATGATGACTAATTTTAACGTGGATAAAATTAGCATTAGTGTGCAT TTATTTTGTTTTTTTCTCCTCCTCTTATTTCTTAAATTCTCTTTAAACACCGTCAGTATT AATATATACAGCCACTTTTTTGGTTTCCTGGGAGGCTTTCTAATCGGCATAATTTTAAAG CGTAACCAGCTGAAGTACTTCCTGAAAAACAATTTACTAATTCAAATCTTGTCCCTGGTC TTCCTGATAGTGAGTTTAGCGGCTGCTATTTTTATATCAACGTACGTCGTGCAGAGTTGT CCGAATTAA
  • Download Fasta
  • Fasta :-

    MENNKSGENAKAFLDSKDKRGKMDDDDDDDDKKKKHDKDKQNGNNKSSAGAAHRKKDGKD NNTKRSGNDNARGQPNGGGRNSDKSGDAKAGGAADDSNPNNDSAPPIDSSPPVASSPPIT SNPPITSNVAKKRERKSNSISLSDTSARRSKDKGDRAHHKLKHKQGSAESAERRKRDAKN VKYVNDANDANSAEKAKHEHGEEEEEEEEDDDDDEEEDDDEEDDDDEEEDDDDDEDDEDE EEDDDDEEDEEKRKNKDINKTHTRKKEKHRKSELLNLDSSNTVQFYNLLNGKNKEKEDNN SSSKKERYRSSNLKKEKKLKMSHTYEEFLSDHHDYTSLKVNYKINKKSHYDKTKKRPHMS ISINENKERTLNKSSICTDNAKFLNFLNDNEKNAHYYKNRKRFESRRRKQKIANIKIKEK NETKETLDYYILNVNEKNKYNEIMSSENVDKVKMPLKHPPGKKTDEAYVSELQDAEQKQQ MKDEERQKNYASTVEEEKKIIKEKSKVKSSIQCNRRFFIFQKKTLRKRKEKIIIFLNHNY SACENGQFNDHFYKTIHKNDLENLEEERIYIDNNKENTIKKIIYRIFPQFSIFSLILYVT FIQWVIFILLISVKSDFTLTPSNDSLKNFGSNFPHNIFKKAEFYRLFTALFLHSNFNHIC ANTYVQLTVGFLLEYLYGTYVVFLVYVFTGIFGIILSSPLTYCYSTTESSSSSSGIIGIF FSEILMMTNFNVDKISISVHLFCFFLLLLFLKFSLNTVSINIYSHFFGFLGGFLIGIILK RNQLKYFLKNNLLIQILSLVFLIVSLAAAIFISTYVVQSCPN

    No Results
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
PVX_085890T1200.6220.600PVX_085890T1260.5770.087PVX_085890S1090.5470.288PVX_085890S1150.5410.465PVX_085890S1100.5380.158PVX_085890S1160.5370.423
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
PVX_085890T1200.6220.600PVX_085890T1260.5770.087PVX_085890S1090.5470.288PVX_085890S1150.5410.465PVX_085890S1100.5380.158PVX_085890S1160.5370.423
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_085890141 SSNSISLSDT0.995unspPVX_085890141 SSNSISLSDT0.995unspPVX_085890141 SSNSISLSDT0.995unspPVX_085890146 SLSDTSARRS0.995unspPVX_085890150 SSARRSKDKG0.997unspPVX_085890167 SHKQGSAESA0.994unspPVX_085890192 SNDANSAEKA0.99unspPVX_085890303 SNNSSSKKER0.996unspPVX_085890348 SINKKSHYDK0.992unspPVX_085890405 SKRFESRRRK0.995unspPVX_085890625 SPSNDSLKNF0.991unspPVX_0858906 SENNKSGENA0.992unspPVX_08589082 SGGRNSDKSG0.997unsp
PVX_085890      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India