PVX_086100 | ATP-dependent Clp protease, putative

UniProt_ID: A5K1F9

Computed_GO_Component_IDs: GO:0020011
Computed_GO_Components: apicoplast
Computed_GO_Function_IDs: GO:0005524 GO:0017111 GO:0008462
Computed_GO_Functions: ATP binding nucleoside-triphosphatase activity obsolete endopeptidase Clp activity
Computed_GO_Process_IDs: GO:0019538
Computed_GO_Processes: protein metabolic process
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	PVX_086100	SP	0.028111	0.969266	0.002623	CS pos: 21-22. IHT-RT. Pr: 0.7048

No Results

Fasta :-
>PVX_086100 MNALYLLLAMLSLNLVVTIHTRTQPNFLNSTLQLNKCNTWNLRRTCRKIKPRNNKLRVSL FDEYDEKCIRALIMAREVAKNHNEKEILLKHLLIAIIRIDSNLVKHILNFCNISLTTFLD KLNNEMNKTGGETNFGTNRDEPNASPGEVPRQLGMPTDQHHPPDNSREVVEGGAYPANDP NGENQLMSTFINKHIQDIEDKINQLKNLEEGQSDISTEGGDADSSVGGADERDEAASNLI RDAAKRVLGGPPGESPSELPSELPSDVSKELSRQLPSDLQGDPPDEKADERADDKADIKF SQNCKRVLHNAVLEARRKKKMFVSVTDILIALINMAQESQNCEFLRYLSELNISVNDLKR ELTGYDEGNCPTPPTGTSHRSNAQRDGDLNANSAEKRGGGDSQSGTPEKRDDNQRMRSLN NRLNNEPPNHHLMNNLNSDYLHQTREFKNYEESSFPPNGKLFNSAYVKDCLTDMVQAAYE KGDEHFFGRKKEIKRIIEILGRRKKSNPLLIGESGVGKTAIIEHLSHLILKDKVPYHLRN CRIYQLNVGNIVAGTKYRGEFEEKMKHLLSNMNKKKKNILFIDEIHVIVGAGSGEGSLDA SNLLKPFLSSDNLQCIGTTTFQEYTKYIESDKALRRRFNCVPVKPFTGKETLLLLKKIKY SYEKYHNIYYTNEALKSIVMLTEDYLPTANFPDKAIDILDEAGAYQKIRYEVFMRRRLRG ENHERSEWGERVERGGQAKSGQENGGQVNGGQANGGKLRSDQPSGDEHGSADQDGIANQD SGGDARSYLQNMHIKYVTSDVIENIVSKKASISYIKKNKKEEEKIIKLKEKLNKIIIGQE KVIDILSRYLFKAITNIKDPNKPIGTLLLCGSSGVGKTLCAQVISKYLFNEDNLIVINMS EYIDKHSVSKLFGSYPGYVGYKEGGELTESVKKKPFSIILFDEIEKAHGEVLHVLLQILD NGMLTDSKGNKVSFKNTFIFMTTNVGSDIVTDYFKLYNRNYSNMGFKYYLSKRPNRGEAD GSLLPEGVNSVANSVEEDPTGLSSNSGGDLQTNRKDDHPVEKSPTQQPNSYDLFEEKLRT NKWYEELQPEIEEELKKKFLPEFLNRIDEKIIFRQFLKRDVINIFQNMIDDLKKRIKKRK NLNLIIEPDVIKYICSDENNIYDMNFGARSIRRALYRYIEDPIASFLISNLCEPNDSIYV SLSSGNKIDVQLVKAPVEQLVL
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_086100.fa Sequence name : PVX_086100 Sequence length : 1222 VALUES OF COMPUTED PARAMETERS Coef20 : 4.563 CoefTot : 0.144 ChDiff : -1 ZoneTo : 61 KR : 10 DE : 0 CleavSite : 24 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.812 2.276 0.296 0.731 MesoH : -0.621 0.363 -0.379 0.206 MuHd_075 : 39.490 18.048 9.479 8.092 MuHd_095 : 39.936 24.778 11.593 9.134 MuHd_100 : 39.162 25.755 12.027 8.906 MuHd_105 : 39.602 28.003 12.364 8.866 Hmax_075 : -9.000 4.550 -1.112 -0.440 Hmax_095 : 3.763 8.225 1.549 2.249 Hmax_100 : 2.300 9.700 1.869 2.280 Hmax_105 : -0.467 10.967 1.389 1.563 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0565 0.9435 DFMC : 0.0207 0.9793 This protein is probably imported in mitochondria. f(Ser) = 0.0492 f(Arg) = 0.0984 CMi = 0.23678 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1222 PVX_086100 MNALYLLLAMLSLNLVVTIHTRTQPNFLNSTLQLNKCNTWNLRRTCRKIKPRNNKLRVSLFDEYDEKCIRALIMAREVAK 80 NHNEKEILLKHLLIAIIRIDSNLVKHILNFCNISLTTFLDKLNNEMNKTGGETNFGTNRDEPNASPGEVPRQLGMPTDQH 160 HPPDNSREVVEGGAYPANDPNGENQLMSTFINKHIQDIEDKINQLKNLEEGQSDISTEGGDADSSVGGADERDEAASNLI 240 RDAAKRVLGGPPGESPSELPSELPSDVSKELSRQLPSDLQGDPPDEKADERADDKADIKFSQNCKRVLHNAVLEARRKKK 320 MFVSVTDILIALINMAQESQNCEFLRYLSELNISVNDLKRELTGYDEGNCPTPPTGTSHRSNAQRDGDLNANSAEKRGGG 400 DSQSGTPEKRDDNQRMRSLNNRLNNEPPNHHLMNNLNSDYLHQTREFKNYEESSFPPNGKLFNSAYVKDCLTDMVQAAYE 480 KGDEHFFGRKKEIKRIIEILGRRKKSNPLLIGESGVGKTAIIEHLSHLILKDKVPYHLRNCRIYQLNVGNIVAGTKYRGE 560 FEEKMKHLLSNMNKKKKNILFIDEIHVIVGAGSGEGSLDASNLLKPFLSSDNLQCIGTTTFQEYTKYIESDKALRRRFNC 640 VPVKPFTGKETLLLLKKIKYSYEKYHNIYYTNEALKSIVMLTEDYLPTANFPDKAIDILDEAGAYQKIRYEVFMRRRLRG 720 ENHERSEWGERVERGGQAKSGQENGGQVNGGQANGGKLRSDQPSGDEHGSADQDGIANQDSGGDARSYLQNMHIKYVTSD 800 VIENIVSKKASISYIKKNKKEEEKIIKLKEKLNKIIIGQEKVIDILSRYLFKAITNIKDPNKPIGTLLLCGSSGVGKTLC 880 AQVISKYLFNEDNLIVINMSEYIDKHSVSKLFGSYPGYVGYKEGGELTESVKKKPFSIILFDEIEKAHGEVLHVLLQILD 960 NGMLTDSKGNKVSFKNTFIFMTTNVGSDIVTDYFKLYNRNYSNMGFKYYLSKRPNRGEADGSLLPEGVNSVANSVEEDPT 1040 GLSSNSGGDLQTNRKDDHPVEKSPTQQPNSYDLFEEKLRTNKWYEELQPEIEEELKKKFLPEFLNRIDEKIIFRQFLKRD 1120 VINIFQNMIDDLKKRIKKRKNLNLIIEPDVIKYICSDENNIYDMNFGARSIRRALYRYIEDPIASFLISNLCEPNDSIYV 1200 SLSSGNKIDVQLVKAPVEQLVL 1280 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................................................................................ 1040 ..............................................................................P. 1120 ................................................................................ 1200 ...................... 1280 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PVX_086100 22 VVTIHTR|TQ 0.075 . PVX_086100 36 STLQLNK|CN 0.059 . PVX_086100 43 CNTWNLR|RT 0.076 . PVX_086100 44 NTWNLRR|TC 0.110 . PVX_086100 47 NLRRTCR|KI 0.256 . PVX_086100 48 LRRTCRK|IK 0.086 . PVX_086100 50 RTCRKIK|PR 0.135 . PVX_086100 52 CRKIKPR|NN 0.094 . PVX_086100 55 IKPRNNK|LR 0.093 . PVX_086100 57 PRNNKLR|VS 0.113 . PVX_086100 67 FDEYDEK|CI 0.065 . PVX_086100 70 YDEKCIR|AL 0.085 . PVX_086100 76 RALIMAR|EV 0.112 . PVX_086100 80 MAREVAK|NH 0.071 . PVX_086100 85 AKNHNEK|EI 0.064 . PVX_086100 90 EKEILLK|HL 0.068 . PVX_086100 98 LLIAIIR|ID 0.085 . PVX_086100 105 IDSNLVK|HI 0.067 . PVX_086100 121 LTTFLDK|LN 0.064 . PVX_086100 128 LNNEMNK|TG 0.072 . PVX_086100 139 TNFGTNR|DE 0.092 . PVX_086100 151 SPGEVPR|QL 0.153 . PVX_086100 167 HPPDNSR|EV 0.128 . PVX_086100 193 MSTFINK|HI 0.083 . PVX_086100 201 IQDIEDK|IN 0.057 . PVX_086100 206 DKINQLK|NL 0.076 . PVX_086100 232 VGGADER|DE 0.082 . PVX_086100 241 AASNLIR|DA 0.129 . PVX_086100 245 LIRDAAK|RV 0.093 . PVX_086100 246 IRDAAKR|VL 0.209 . PVX_086100 269 LPSDVSK|EL 0.102 . PVX_086100 273 VSKELSR|QL 0.080 . PVX_086100 287 GDPPDEK|AD 0.061 . PVX_086100 291 DEKADER|AD 0.088 . PVX_086100 295 DERADDK|AD 0.058 . PVX_086100 299 DDKADIK|FS 0.062 . PVX_086100 305 KFSQNCK|RV 0.068 . PVX_086100 306 FSQNCKR|VL 0.195 . PVX_086100 316 NAVLEAR|RK 0.084 . PVX_086100 317 AVLEARR|KK 0.084 . PVX_086100 318 VLEARRK|KK 0.069 . PVX_086100 319 LEARRKK|KM 0.328 . PVX_086100 320 EARRKKK|MF 0.415 . PVX_086100 346 QNCEFLR|YL 0.127 . PVX_086100 359 ISVNDLK|RE 0.060 . PVX_086100 360 SVNDLKR|EL 0.185 . PVX_086100 380 PTGTSHR|SN 0.129 . PVX_086100 385 HRSNAQR|DG 0.166 . PVX_086100 396 NANSAEK|RG 0.060 . PVX_086100 397 ANSAEKR|GG 0.410 . PVX_086100 409 QSGTPEK|RD 0.067 . PVX_086100 410 SGTPEKR|DD 0.206 . PVX_086100 415 KRDDNQR|MR 0.083 . PVX_086100 417 DDNQRMR|SL 0.147 . PVX_086100 422 MRSLNNR|LN 0.108 . PVX_086100 445 DYLHQTR|EF 0.086 . PVX_086100 448 HQTREFK|NY 0.115 . PVX_086100 460 SFPPNGK|LF 0.059 . PVX_086100 468 FNSAYVK|DC 0.073 . PVX_086100 481 VQAAYEK|GD 0.065 . PVX_086100 489 DEHFFGR|KK 0.113 . PVX_086100 490 EHFFGRK|KE 0.066 . PVX_086100 491 HFFGRKK|EI 0.100 . PVX_086100 494 GRKKEIK|RI 0.081 . PVX_086100 495 RKKEIKR|II 0.218 . PVX_086100 502 IIEILGR|RK 0.065 . PVX_086100 503 IEILGRR|KK 0.093 . PVX_086100 504 EILGRRK|KS 0.070 . PVX_086100 505 ILGRRKK|SN 0.362 . PVX_086100 518 GESGVGK|TA 0.081 . PVX_086100 531 LSHLILK|DK 0.066 . PVX_086100 533 HLILKDK|VP 0.060 . PVX_086100 539 KVPYHLR|NC 0.080 . PVX_086100 542 YHLRNCR|IY 0.149 . PVX_086100 556 NIVAGTK|YR 0.068 . PVX_086100 558 VAGTKYR|GE 0.102 . PVX_086100 564 RGEFEEK|MK 0.059 . PVX_086100 566 EFEEKMK|HL 0.065 . PVX_086100 574 LLSNMNK|KK 0.073 . PVX_086100 575 LSNMNKK|KK 0.112 . PVX_086100 576 SNMNKKK|KN 0.112 . PVX_086100 577 NMNKKKK|NI 0.120 . PVX_086100 605 DASNLLK|PF 0.062 . PVX_086100 626 TFQEYTK|YI 0.069 . PVX_086100 632 KYIESDK|AL 0.063 . PVX_086100 635 ESDKALR|RR 0.068 . PVX_086100 636 SDKALRR|RF 0.108 . PVX_086100 637 DKALRRR|FN 0.163 . PVX_086100 644 FNCVPVK|PF 0.070 . PVX_086100 649 VKPFTGK|ET 0.062 . PVX_086100 656 ETLLLLK|KI 0.053 . PVX_086100 657 TLLLLKK|IK 0.090 . PVX_086100 659 LLLKKIK|YS 0.075 . PVX_086100 664 IKYSYEK|YH 0.065 . PVX_086100 676 YTNEALK|SI 0.072 . PVX_086100 694 TANFPDK|AI 0.085 . PVX_086100 707 EAGAYQK|IR 0.058 . PVX_086100 709 GAYQKIR|YE 0.104 . PVX_086100 715 RYEVFMR|RR 0.091 . PVX_086100 716 YEVFMRR|RL 0.118 . PVX_086100 717 EVFMRRR|LR 0.107 . PVX_086100 719 FMRRRLR|GE 0.266 . PVX_086100 725 RGENHER|SE 0.123 . PVX_086100 731 RSEWGER|VE 0.079 . PVX_086100 734 WGERVER|GG 0.194 . PVX_086100 739 ERGGQAK|SG 0.110 . PVX_086100 757 GQANGGK|LR 0.069 . PVX_086100 759 ANGGKLR|SD 0.169 . PVX_086100 786 DSGGDAR|SY 0.154 . PVX_086100 795 LQNMHIK|YV 0.092 . PVX_086100 808 IENIVSK|KA 0.075 . PVX_086100 809 ENIVSKK|AS 0.107 . PVX_086100 816 ASISYIK|KN 0.062 . PVX_086100 817 SISYIKK|NK 0.129 . PVX_086100 819 SYIKKNK|KE 0.066 . PVX_086100 820 YIKKNKK|EE 0.108 . PVX_086100 824 NKKEEEK|II 0.065 . PVX_086100 827 EEEKIIK|LK 0.061 . PVX_086100 829 EKIIKLK|EK 0.063 . PVX_086100 831 IIKLKEK|LN 0.079 . PVX_086100 834 LKEKLNK|II 0.085 . PVX_086100 841 IIIGQEK|VI 0.062 . PVX_086100 848 VIDILSR|YL 0.124 . PVX_086100 852 LSRYLFK|AI 0.071 . PVX_086100 858 KAITNIK|DP 0.069 . PVX_086100 862 NIKDPNK|PI 0.077 . PVX_086100 877 GSSGVGK|TL 0.092 . PVX_086100 886 CAQVISK|YL 0.071 . PVX_086100 905 MSEYIDK|HS 0.075 . PVX_086100 910 DKHSVSK|LF 0.072 . PVX_086100 922 PGYVGYK|EG 0.064 . PVX_086100 932 ELTESVK|KK 0.055 . PVX_086100 933 LTESVKK|KP 0.079 . PVX_086100 934 TESVKKK|PF 0.328 . PVX_086100 946 LFDEIEK|AH 0.066 . PVX_086100 968 GMLTDSK|GN 0.060 . PVX_086100 971 TDSKGNK|VS 0.073 . PVX_086100 975 GNKVSFK|NT 0.083 . PVX_086100 995 IVTDYFK|LY 0.056 . PVX_086100 999 YFKLYNR|NY 0.078 . PVX_086100 1007 YSNMGFK|YY 0.071 . PVX_086100 1012 FKYYLSK|RP 0.066 . PVX_086100 1013 KYYLSKR|PN 0.171 . PVX_086100 1016 LSKRPNR|GE 0.255 . PVX_086100 1054 GDLQTNR|KD 0.073 . PVX_086100 1055 DLQTNRK|DD 0.129 . PVX_086100 1062 DDHPVEK|SP 0.107 . PVX_086100 1077 YDLFEEK|LR 0.054 . PVX_086100 1079 LFEEKLR|TN 0.085 . PVX_086100 1082 EKLRTNK|WY 0.125 . PVX_086100 1096 EIEEELK|KK 0.054 . PVX_086100 1097 IEEELKK|KF 0.084 . PVX_086100 1098 EEELKKK|FL 0.129 . PVX_086100 1106 LPEFLNR|ID 0.112 . PVX_086100 1110 LNRIDEK|II 0.074 . PVX_086100 1114 DEKIIFR|QF 0.069 . PVX_086100 1118 IFRQFLK|RD 0.057 . PVX_086100 1119 FRQFLKR|DV 0.508 *ProP* PVX_086100 1133 NMIDDLK|KR 0.056 . PVX_086100 1134 MIDDLKK|RI 0.080 . PVX_086100 1135 IDDLKKR|IK 0.151 . PVX_086100 1137 DLKKRIK|KR 0.056 . PVX_086100 1138 LKKRIKK|RK 0.202 . PVX_086100 1139 KKRIKKR|KN 0.191 . PVX_086100 1140 KRIKKRK|NL 0.114 . PVX_086100 1152 IEPDVIK|YI 0.069 . PVX_086100 1169 DMNFGAR|SI 0.171 . PVX_086100 1172 FGARSIR|RA 0.162 . PVX_086100 1173 GARSIRR|AL 0.176 . PVX_086100 1177 IRRALYR|YI 0.218 . PVX_086100 1207 SLSSGNK|ID 0.060 . PVX_086100 1214 IDVQLVK|AP 0.061 . ____________________________^_________________

Fasta :-
>PVX_086100 ATGAACGCGCTTTACCTCCTGCTCGCCATGCTCTCGCTCAACCTTGTGGTAACCATACAT ACAAGAACCCAGCCCAACTTCCTAAACAGCACCCTCCAGCTGAACAAATGCAACACGTGG AATCTGCGAAGGACCTGCAGGAAAATCAAGCCAAGAAACAACAAATTACGCGTCTCCCTA TTTGACGAATATGATGAAAAATGCATAAGGGCCCTCATCATGGCCAGAGAAGTGGCCAAA AATCACAACGAAAAGGAAATCCTTCTAAAGCATCTCCTAATTGCCATCATCAGAATCGAC TCCAATTTGGTAAAACACATTTTAAATTTTTGCAACATCTCCCTCACGACCTTTCTGGAC AAGTTAAATAACGAAATGAATAAAACTGGGGGGGAGACAAACTTTGGGACCAACCGAGAC GAACCAAATGCCTCCCCAGGGGAGGTACCTCGACAGTTGGGGATGCCAACAGATCAGCAT CACCCCCCAGACAACAGCAGAGAAGTTGTAGAAGGGGGAGCGTATCCAGCGAACGACCCA AACGGAGAGAACCAACTGATGAGCACCTTCATCAACAAACACATCCAAGATATAGAGGAC AAAATAAATCAACTGAAAAACCTGGAGGAGGGGCAGAGTGACATTTCAACGGAGGGCGGC GATGCTGACAGCTCCGTGGGGGGGGCAGACGAAAGGGATGAGGCAGCCAGCAACCTCATC CGCGACGCGGCGAAGCGCGTTTTGGGAGGGCCCCCAGGCGAGTCGCCCAGCGAATTACCC AGCGAATTACCCAGCGATGTGTCAAAGGAGCTGTCCCGCCAGTTGCCCAGCGACCTGCAG GGCGACCCCCCCGACGAAAAGGCAGACGAAAGGGCGGACGACAAGGCGGACATCAAGTTT TCCCAAAACTGCAAGCGGGTGCTCCACAACGCGGTGCTGGAAGCGAGGAGGAAGAAGAAA ATGTTCGTCAGCGTGACGGACATTCTGATCGCCCTCATCAACATGGCGCAGGAGAGTCAG AACTGCGAGTTCTTGAGGTACCTCAGCGAGCTGAACATAAGCGTCAACGATTTGAAGAGG GAGCTAACTGGCTACGACGAGGGGAATTGCCCTACCCCCCCCACGGGCACGTCACACCGT AGTAACGCCCAGCGGGATGGCGACCTGAATGCTAACTCTGCTGAGAAACGTGGAGGGGGT GACTCCCAAAGTGGGACGCCCGAAAAGAGGGACGACAATCAACGAATGCGCAGCTTGAAC AACCGCTTGAACAACGAACCGCCCAACCACCACCTGATGAACAACCTAAACAGTGACTAC CTGCACCAGACGAGGGAATTCAAAAACTACGAGGAGAGTAGCTTCCCACCAAACGGCAAA CTTTTTAACTCCGCGTATGTGAAAGACTGCCTAACAGATATGGTCCAAGCGGCGTACGAA AAAGGAGATGAACATTTCTTCGGAAGAAAAAAAGAAATAAAAAGAATAATAGAAATATTA GGAAGGAGAAAAAAATCAAACCCATTACTAATTGGAGAGAGTGGGGTTGGAAAAACAGCC ATCATCGAGCATTTGTCTCATTTAATATTGAAAGATAAAGTGCCCTACCATTTGAGGAAC TGCAGAATCTACCAACTCAATGTTGGCAACATCGTAGCTGGGACAAAGTACAGAGGAGAA TTTGAAGAAAAAATGAAGCACCTGTTAAGCAATATGAATAAGAAAAAAAAAAATATTCTT TTTATTGACGAAATTCATGTGATTGTTGGAGCAGGCAGTGGGGAGGGATCGTTAGACGCT TCCAATTTGCTGAAGCCCTTCCTCTCCTCAGATAATTTGCAATGTATCGGCACCACGACT TTCCAAGAGTACACCAAATATATAGAGTCAGATAAAGCCCTGAGGAGACGATTTAACTGC GTCCCTGTGAAGCCGTTCACTGGAAAGGAGACTCTCCTGCTGCTGAAGAAAATTAAATAC AGCTATGAAAAGTACCACAATATTTACTACACAAATGAGGCCCTCAAGTCGATCGTCATG CTCACGGAGGACTACCTGCCCACGGCCAATTTCCCCGACAAGGCCATCGACATTTTGGAC GAGGCCGGCGCGTACCAGAAGATCAGGTACGAGGTGTTCATGCGGAGGAGGTTGCGTGGT GAGAACCATGAGCGCAGTGAGTGGGGTGAGCGCGTTGAGCGCGGTGGTCAAGCGAAAAGC GGCCAGGAGAATGGCGGCCAGGTGAACGGCGGCCAGGCGAATGGCGGTAAGCTGCGTTCC GACCAACCGAGCGGTGACGAGCATGGGAGTGCAGACCAGGACGGAATTGCCAACCAGGAC AGCGGCGGCGACGCGCGGAGCTACCTCCAAAACATGCACATTAAGTACGTCACGTCGGAC GTGATCGAAAACATCGTCAGCAAAAAGGCCTCCATATCGTACATAAAGAAAAACAAAAAG GAGGAAGAAAAAATTATAAAGCTGAAGGAAAAACTAAACAAAATTATAATCGGCCAAGAA AAGGTGATAGACATACTATCCAGGTATCTGTTCAAAGCCATAACGAATATTAAGGACCCC AATAAGCCCATTGGCACCTTGCTGCTGTGTGGGTCCTCAGGGGTTGGAAAGACTCTATGC GCCCAAGTCATTTCGAAGTATCTATTTAATGAGGACAACCTAATCGTAATCAACATGAGT GAGTACATAGATAAACACTCAGTTAGCAAGCTGTTCGGTAGCTACCCAGGATATGTAGGT TACAAGGAAGGAGGGGAACTAACCGAAAGTGTAAAGAAAAAACCCTTTTCCATCATCCTT TTTGATGAAATTGAAAAGGCACACGGTGAAGTTTTACATGTTCTCTTGCAAATACTAGAC AATGGAATGCTAACAGATTCGAAGGGAAATAAAGTGTCCTTTAAAAACACCTTCATCTTC ATGACGACCAACGTAGGCTCTGACATCGTCACAGATTATTTCAAGCTGTACAATAGGAAC TACTCAAATATGGGCTTTAAATACTACCTCAGTAAGAGGCCAAACAGGGGAGAGGCAGAT GGTTCGCTCCTCCCTGAAGGGGTTAACAGTGTAGCTAACTCAGTGGAGGAAGACCCAACC GGGTTAAGCAGCAACAGTGGGGGTGACCTCCAAACAAACCGCAAAGATGACCACCCCGTG GAGAAATCCCCCACCCAACAACCAAACAGCTACGACCTTTTTGAGGAAAAACTTCGAACC AACAAATGGTACGAAGAGCTACAGCCAGAAATAGAAGAAGAACTGAAGAAGAAATTTCTT CCAGAATTTCTCAACAGGATAGACGAGAAAATTATTTTCAGGCAATTCCTCAAAAGAGAT GTTATTAATATTTTCCAAAATATGATTGACGATTTGAAAAAAAGAATTAAAAAAAGAAAA AACCTCAATTTGATAATCGAACCAGATGTTATTAAATACATTTGTAGTGACGAAAATAAT ATTTATGACATGAATTTTGGTGCCAGATCCATTAGAAGGGCCCTCTATAGGTATATTGAG GATCCCATTGCTTCCTTCTTAATTTCGAATTTGTGCGAACCGAACGATTCCATTTACGTT TCCCTCTCCAGCGGTAACAAAATTGATGTGCAGTTGGTGAAGGCGCCCGTGGAGCAGCTT GTGTTGTGA
Download Fasta

Fasta :-

MNALYLLLAMLSLNLVVTIHTRTQPNFLNSTLQLNKCNTWNLRRTCRKIKPRNNKLRVSL FDEYDEKCIRALIMAREVAKNHNEKEILLKHLLIAIIRIDSNLVKHILNFCNISLTTFLD KLNNEMNKTGGETNFGTNRDEPNASPGEVPRQLGMPTDQHHPPDNSREVVEGGAYPANDP NGENQLMSTFINKHIQDIEDKINQLKNLEEGQSDISTEGGDADSSVGGADERDEAASNLI RDAAKRVLGGPPGESPSELPSELPSDVSKELSRQLPSDLQGDPPDEKADERADDKADIKF SQNCKRVLHNAVLEARRKKKMFVSVTDILIALINMAQESQNCEFLRYLSELNISVNDLKR ELTGYDEGNCPTPPTGTSHRSNAQRDGDLNANSAEKRGGGDSQSGTPEKRDDNQRMRSLN NRLNNEPPNHHLMNNLNSDYLHQTREFKNYEESSFPPNGKLFNSAYVKDCLTDMVQAAYE KGDEHFFGRKKEIKRIIEILGRRKKSNPLLIGESGVGKTAIIEHLSHLILKDKVPYHLRN CRIYQLNVGNIVAGTKYRGEFEEKMKHLLSNMNKKKKNILFIDEIHVIVGAGSGEGSLDA SNLLKPFLSSDNLQCIGTTTFQEYTKYIESDKALRRRFNCVPVKPFTGKETLLLLKKIKY SYEKYHNIYYTNEALKSIVMLTEDYLPTANFPDKAIDILDEAGAYQKIRYEVFMRRRLRG ENHERSEWGERVERGGQAKSGQENGGQVNGGQANGGKLRSDQPSGDEHGSADQDGIANQD SGGDARSYLQNMHIKYVTSDVIENIVSKKASISYIKKNKKEEEKIIKLKEKLNKIIIGQE KVIDILSRYLFKAITNIKDPNKPIGTLLLCGSSGVGKTLCAQVISKYLFNEDNLIVINMS EYIDKHSVSKLFGSYPGYVGYKEGGELTESVKKKPFSIILFDEIEKAHGEVLHVLLQILD NGMLTDSKGNKVSFKNTFIFMTTNVGSDIVTDYFKLYNRNYSNMGFKYYLSKRPNRGEAD GSLLPEGVNSVANSVEEDPTGLSSNSGGDLQTNRKDDHPVEKSPTQQPNSYDLFEEKLRT NKWYEELQPEIEEELKKKFLPEFLNRIDEKIIFRQFLKRDVINIFQNMIDDLKKRIKKRK NLNLIIEPDVIKYICSDENNIYDMNFGARSIRRALYRYIEDPIASFLISNLCEPNDSIYV SLSSGNKIDVQLVKAPVEQLVL

Double Clp-N motif

title: ATP binding site
coordinates: E513,S514,G515,V516,G517,K518,T519,A520,D583,T620

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	PVX_086100	216 S	QSDISTEGG	0.996	unsp	PVX_086100	216 S	QSDISTEGG	0.996	unsp	PVX_086100	216 S	QSDISTEGG	0.996	unsp	PVX_086100	255 S	PPGESPSEL	0.995	unsp	PVX_086100	764 S	SDQPSGDEH	0.995	unsp	PVX_086100	781 S	ANQDSGGDA	0.996	unsp	PVX_086100	1034 S	SVANSVEED	0.996	unsp	PVX_086100	59 S	KLRVSLFDE	0.994	unsp	PVX_086100	145 S	EPNASPGEV	0.991	unsp

PVX_086100

PVX_086100 | ATP-dependent Clp protease, putative

ID's

UniProt_ID: A5K1F9

GEO Functions

Computed_GO_Component_IDs: GO:0020011

Computed_GO_Components: apicoplast

Computed_GO_Function_IDs: GO:0005524 GO:0017111 GO:0008462

Computed_GO_Functions: ATP binding nucleoside-triphosphatase activity obsolete endopeptidase Clp activity

Computed_GO_Process_IDs: GO:0019538

Computed_GO_Processes: protein metabolic process

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Double Clp-N motif

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India