PVX_088155 | serine protease DegP, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      GO:0003676      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      nucleic acid binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_088155SP0.2532090.7230810.023709CS pos: 22-23. IRG-GG. Pr: 0.4962
No Results

  • Fasta :-

    >PVX_088155 MKLSLQSYSCCAAVAALVVIRGGGDPWGGFFPRCAAHQMGERPPPTDERNYAENNGGKLG GEIEKEEEEHLHIDREVKGDDSHFTFDESSPTGGGKNVKVGLPLAKYTPGYVRPVLSDKR VTKGEAPGGENNLPSGDPQDGPPYLSKQQCGASFRDNAKADEHPSEGSHHDGEEPPSAAP NIWRRKKKNILQHRMSPTERGQEGYPPVEEKQTHREASNSDGSNLHESNFRGGSSYTEGS HQVGQLKLRTNRDDQKMMKGIFTPQVVRAMKEYLLKGGKKYGSGQVGHLGGSSDQQHGGD RRTGSNQAIHPLSGEAIHPLSSEAIHPLRFFPANFAPHSGDSQRGAARRSIINEKLRRNL SQITLSVSAAEERTKERVEEGAEVGAQSVAQSGGADDGEAGALRKIYKGVVKLYVDITEP SLETIWSNSPPKRVSGSGFVIEGGLILTNAHNVAYSTRILVRKHGCSKKYEGAVLHVAHE ADMALLTVADGSFYEDVSALELGPLPSLRDDVITVGYPSGGDKLSVTKGIVSRIEVQYYR HSNSRLLLTQIDAPMNPGNSGGPALVKGKVAGICFQLLKMANNTSYIIPTPVIKHFLMDL HRSGKYNGYPSLGVKYLPLDNANLRRLLGLTDLERRREVEENSGILVTEVDEEQMGCQSG GGGSTKWAVSSGEASTGAASSGEASMGAASTGAASSGEASMGAASTGAASHAITAGRGPL PGRPPITPTAPAEPLCYGLKKNDVLLSVEGTQIKSDGTVTLRGDESVDFQFLFNGKFVGD LCTCRVVRGGRVQTALVRVSRVHYLVRQHNWDVPNKFFIYGGVVFTTLTRSLYADEETDN VEVMRLLQFNLFKKQRDDEIVIVKRILPSKLTIGFNYQDCIVLTVNGIPVRNLQHLVGVI DGREGPLGGGVAKKSTQMKQMDQMGERRGTPSEGDANPYLKFTLEEDPFFQMKEEKDNLL HFLLLTSNGQQVPLVLLRAEVQRESAEIRRVYGITRERYVYSG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_088155.fa Sequence name : PVX_088155 Sequence length : 1003 VALUES OF COMPUTED PARAMETERS Coef20 : 4.802 CoefTot : -1.245 ChDiff : 0 ZoneTo : 40 KR : 3 DE : 1 CleavSite : 35 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.406 1.747 0.383 0.530 MesoH : 0.328 0.300 -0.144 0.220 MuHd_075 : 24.433 15.618 5.775 5.511 MuHd_095 : 41.562 21.995 9.898 9.118 MuHd_100 : 31.321 18.258 7.554 6.562 MuHd_105 : 24.028 12.817 6.740 4.991 Hmax_075 : 13.300 8.400 3.160 5.690 Hmax_095 : 17.150 15.137 3.183 6.213 Hmax_100 : 18.000 15.500 3.637 6.480 Hmax_105 : 13.400 12.862 5.439 5.556 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5660 0.4340 DFMC : 0.8474 0.1526
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1003 PVX_088155 MKLSLQSYSCCAAVAALVVIRGGGDPWGGFFPRCAAHQMGERPPPTDERNYAENNGGKLGGEIEKEEEEHLHIDREVKGD 80 DSHFTFDESSPTGGGKNVKVGLPLAKYTPGYVRPVLSDKRVTKGEAPGGENNLPSGDPQDGPPYLSKQQCGASFRDNAKA 160 DEHPSEGSHHDGEEPPSAAPNIWRRKKKNILQHRMSPTERGQEGYPPVEEKQTHREASNSDGSNLHESNFRGGSSYTEGS 240 HQVGQLKLRTNRDDQKMMKGIFTPQVVRAMKEYLLKGGKKYGSGQVGHLGGSSDQQHGGDRRTGSNQAIHPLSGEAIHPL 320 SSEAIHPLRFFPANFAPHSGDSQRGAARRSIINEKLRRNLSQITLSVSAAEERTKERVEEGAEVGAQSVAQSGGADDGEA 400 GALRKIYKGVVKLYVDITEPSLETIWSNSPPKRVSGSGFVIEGGLILTNAHNVAYSTRILVRKHGCSKKYEGAVLHVAHE 480 ADMALLTVADGSFYEDVSALELGPLPSLRDDVITVGYPSGGDKLSVTKGIVSRIEVQYYRHSNSRLLLTQIDAPMNPGNS 560 GGPALVKGKVAGICFQLLKMANNTSYIIPTPVIKHFLMDLHRSGKYNGYPSLGVKYLPLDNANLRRLLGLTDLERRREVE 640 ENSGILVTEVDEEQMGCQSGGGGSTKWAVSSGEASTGAASSGEASMGAASTGAASSGEASMGAASTGAASHAITAGRGPL 720 PGRPPITPTAPAEPLCYGLKKNDVLLSVEGTQIKSDGTVTLRGDESVDFQFLFNGKFVGDLCTCRVVRGGRVQTALVRVS 800 RVHYLVRQHNWDVPNKFFIYGGVVFTTLTRSLYADEETDNVEVMRLLQFNLFKKQRDDEIVIVKRILPSKLTIGFNYQDC 880 IVLTVNGIPVRNLQHLVGVIDGREGPLGGGVAKKSTQMKQMDQMGERRGTPSEGDANPYLKFTLEEDPFFQMKEEKDNLL 960 HFLLLTSNGQQVPLVLLRAEVQRESAEIRRVYGITRERYVYSG 1040 ................................................................................ 80 ................................................................................ 160 ...........................P.................................................... 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ........................................... 1040 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PVX_088155 2 -----MK|LS 0.061 . PVX_088155 21 AALVVIR|GG 0.104 . PVX_088155 33 WGGFFPR|CA 0.144 . PVX_088155 42 AHQMGER|PP 0.076 . PVX_088155 49 PPPTDER|NY 0.082 . PVX_088155 58 AENNGGK|LG 0.077 . PVX_088155 65 LGGEIEK|EE 0.065 . PVX_088155 75 EHLHIDR|EV 0.095 . PVX_088155 78 HIDREVK|GD 0.127 . PVX_088155 96 SPTGGGK|NV 0.093 . PVX_088155 99 GGGKNVK|VG 0.055 . PVX_088155 106 VGLPLAK|YT 0.066 . PVX_088155 113 YTPGYVR|PV 0.080 . PVX_088155 119 RPVLSDK|RV 0.098 . PVX_088155 120 PVLSDKR|VT 0.114 . PVX_088155 123 SDKRVTK|GE 0.181 . PVX_088155 147 GPPYLSK|QQ 0.062 . PVX_088155 155 QCGASFR|DN 0.125 . PVX_088155 159 SFRDNAK|AD 0.067 . PVX_088155 184 AAPNIWR|RK 0.087 . PVX_088155 185 APNIWRR|KK 0.183 . PVX_088155 186 PNIWRRK|KK 0.086 . PVX_088155 187 NIWRRKK|KN 0.277 . PVX_088155 188 IWRRKKK|NI 0.577 *ProP* PVX_088155 194 KNILQHR|MS 0.110 . PVX_088155 200 RMSPTER|GQ 0.142 . PVX_088155 211 YPPVEEK|QT 0.074 . PVX_088155 215 EEKQTHR|EA 0.117 . PVX_088155 231 LHESNFR|GG 0.097 . PVX_088155 247 HQVGQLK|LR 0.059 . PVX_088155 249 VGQLKLR|TN 0.104 . PVX_088155 252 LKLRTNR|DD 0.294 . PVX_088155 256 TNRDDQK|MM 0.071 . PVX_088155 259 DDQKMMK|GI 0.075 . PVX_088155 268 FTPQVVR|AM 0.071 . PVX_088155 271 QVVRAMK|EY 0.099 . PVX_088155 276 MKEYLLK|GG 0.067 . PVX_088155 279 YLLKGGK|KY 0.067 . PVX_088155 280 LLKGGKK|YG 0.131 . PVX_088155 301 QQHGGDR|RT 0.098 . PVX_088155 302 QHGGDRR|TG 0.121 . PVX_088155 329 EAIHPLR|FF 0.090 . PVX_088155 344 HSGDSQR|GA 0.106 . PVX_088155 348 SQRGAAR|RS 0.099 . PVX_088155 349 QRGAARR|SI 0.305 . PVX_088155 355 RSIINEK|LR 0.055 . PVX_088155 357 IINEKLR|RN 0.085 . PVX_088155 358 INEKLRR|NL 0.189 . PVX_088155 373 VSAAEER|TK 0.115 . PVX_088155 375 AAEERTK|ER 0.059 . PVX_088155 377 EERTKER|VE 0.112 . PVX_088155 404 GEAGALR|KI 0.099 . PVX_088155 405 EAGALRK|IY 0.080 . PVX_088155 408 ALRKIYK|GV 0.090 . PVX_088155 412 IYKGVVK|LY 0.061 . PVX_088155 432 WSNSPPK|RV 0.110 . PVX_088155 433 SNSPPKR|VS 0.451 . PVX_088155 458 NVAYSTR|IL 0.094 . PVX_088155 462 STRILVR|KH 0.101 . PVX_088155 463 TRILVRK|HG 0.097 . PVX_088155 468 RKHGCSK|KY 0.075 . PVX_088155 469 KHGCSKK|YE 0.197 . PVX_088155 509 GPLPSLR|DD 0.096 . PVX_088155 523 YPSGGDK|LS 0.067 . PVX_088155 528 DKLSVTK|GI 0.062 . PVX_088155 533 TKGIVSR|IE 0.101 . PVX_088155 540 IEVQYYR|HS 0.076 . PVX_088155 545 YRHSNSR|LL 0.107 . PVX_088155 567 GGPALVK|GK 0.065 . PVX_088155 569 PALVKGK|VA 0.078 . PVX_088155 579 ICFQLLK|MA 0.059 . PVX_088155 594 IPTPVIK|HF 0.063 . PVX_088155 602 FLMDLHR|SG 0.092 . PVX_088155 605 DLHRSGK|YN 0.156 . PVX_088155 615 YPSLGVK|YL 0.063 . PVX_088155 625 LDNANLR|RL 0.076 . PVX_088155 626 DNANLRR|LL 0.129 . PVX_088155 635 GLTDLER|RR 0.081 . PVX_088155 636 LTDLERR|RE 0.080 . PVX_088155 637 TDLERRR|EV 0.178 . PVX_088155 666 GGGGSTK|WA 0.079 . PVX_088155 717 HAITAGR|GP 0.100 . PVX_088155 723 RGPLPGR|PP 0.072 . PVX_088155 740 PLCYGLK|KN 0.061 . PVX_088155 741 LCYGLKK|ND 0.071 . PVX_088155 754 VEGTQIK|SD 0.088 . PVX_088155 762 DGTVTLR|GD 0.089 . PVX_088155 776 QFLFNGK|FV 0.084 . PVX_088155 785 GDLCTCR|VV 0.124 . PVX_088155 788 CTCRVVR|GG 0.245 . PVX_088155 791 RVVRGGR|VQ 0.166 . PVX_088155 798 VQTALVR|VS 0.065 . PVX_088155 801 ALVRVSR|VH 0.174 . PVX_088155 807 RVHYLVR|QH 0.092 . PVX_088155 816 NWDVPNK|FF 0.073 . PVX_088155 830 VFTTLTR|SL 0.105 . PVX_088155 845 DNVEVMR|LL 0.089 . PVX_088155 853 LQFNLFK|KQ 0.065 . PVX_088155 854 QFNLFKK|QR 0.114 . PVX_088155 856 NLFKKQR|DD 0.144 . PVX_088155 864 DEIVIVK|RI 0.060 . PVX_088155 865 EIVIVKR|IL 0.151 . PVX_088155 870 KRILPSK|LT 0.066 . PVX_088155 891 VNGIPVR|NL 0.084 . PVX_088155 903 VGVIDGR|EG 0.074 . PVX_088155 913 LGGGVAK|KS 0.074 . PVX_088155 914 GGGVAKK|ST 0.243 . PVX_088155 919 KKSTQMK|QM 0.106 . PVX_088155 927 MDQMGER|RG 0.092 . PVX_088155 928 DQMGERR|GT 0.146 . PVX_088155 941 DANPYLK|FT 0.076 . PVX_088155 953 DPFFQMK|EE 0.071 . PVX_088155 956 FQMKEEK|DN 0.065 . PVX_088155 978 VPLVLLR|AE 0.082 . PVX_088155 983 LRAEVQR|ES 0.117 . PVX_088155 989 RESAEIR|RV 0.162 . PVX_088155 990 ESAEIRR|VY 0.153 . PVX_088155 996 RVYGITR|ER 0.073 . PVX_088155 998 YGITRER|YV 0.117 . ____________________________^_________________

  • Fasta :-

    >PVX_088155 ATGAAATTGTCTCTGCAGAGTTACTCCTGCTGCGCGGCTGTAGCTGCACTGGTGGTCATT CGGGGGGGCGGTGACCCCTGGGGGGGCTTCTTCCCTCGGTGCGCTGCTCACCAGATGGGT GAGCGGCCACCCCCGACTGACGAGAGGAACTACGCAGAGAACAATGGGGGGAAGTTAGGA GGGGAGATTGAAAAGGAGGAAGAAGAGCACCTTCACATAGACAGAGAGGTGAAAGGAGAT GACTCCCATTTTACATTTGATGAAAGCTCACCAACTGGTGGGGGAAAAAACGTTAAGGTG GGTCTCCCCTTGGCTAAATACACCCCTGGGTATGTTCGCCCCGTCCTGAGTGACAAACGA GTGACTAAGGGGGAGGCACCCGGGGGAGAGAACAACCTCCCCAGTGGAGATCCACAAGAT GGGCCACCCTACCTTTCGAAGCAACAGTGTGGAGCTTCCTTTAGGGACAATGCCAAAGCA GATGAGCATCCCAGTGAAGGCAGCCACCACGACGGGGAAGAACCCCCCTCTGCTGCGCCT AACATATGGAGGCGAAAAAAAAAAAACATTCTACAACATAGAATGAGCCCAACAGAACGG GGGCAGGAGGGGTACCCACCAGTAGAGGAGAAGCAGACCCACAGGGAGGCATCCAATTCA GATGGAAGTAACCTCCATGAAAGTAACTTCCGTGGTGGTAGCTCCTACACGGAGGGGTCA CACCAAGTGGGGCAACTCAAACTGAGGACCAACAGAGACGACCAAAAAATGATGAAAGGT ATTTTCACCCCCCAGGTGGTTAGGGCTATGAAGGAGTACCTACTGAAGGGGGGGAAGAAA TATGGGAGTGGCCAAGTGGGGCATTTGGGGGGGTCCTCAGACCAGCAGCATGGGGGAGAC AGGCGGACAGGAAGCAACCAAGCGATTCACCCGTTGAGCGGCGAAGCGATTCACCCGTTG AGCAGTGAAGCGATTCACCCGTTGAGGTTCTTTCCAGCGAACTTCGCGCCCCACTCCGGA GACAGCCAAAGGGGTGCGGCCAGAAGGTCCATCATAAATGAAAAGCTGCGCCGAAATTTG AGCCAAATAACGCTGAGCGTTTCAGCAGCGGAGGAACGTACGAAGGAGCGTGTTGAGGAG GGTGCTGAGGTGGGTGCTCAGTCAGTTGCTCAGTCAGGTGGTGCGGATGACGGCGAGGCG GGCGCGCTGCGCAAAATATACAAAGGCGTCGTCAAGCTGTATGTGGACATCACGGAGCCG AGCCTTGAAACGATCTGGAGCAACAGTCCCCCCAAGCGCGTCAGCGGCTCCGGGTTTGTC ATCGAGGGGGGCCTCATCTTGACGAATGCGCACAACGTGGCGTACAGCACGAGGATCTTG GTGAGGAAGCACGGGTGCTCCAAAAAGTACGAGGGCGCCGTTCTGCACGTGGCGCATGAA GCAGACATGGCCCTCCTGACCGTCGCAGACGGGAGTTTCTACGAAGACGTGAGCGCCCTG GAGCTGGGCCCGCTGCCCTCCCTGCGGGACGACGTCATAACGGTCGGCTACCCCTCGGGG GGGGACAAGCTCAGCGTCACCAAGGGTATTGTGAGCCGCATAGAGGTGCAGTACTACCGG CACAGCAACTCCAGACTCCTCCTGACGCAGATAGACGCGCCGATGAACCCTGGGAACAGC GGAGGGCCCGCGCTCGTAAAAGGAAAGGTGGCTGGGATCTGCTTCCAGCTGCTGAAGATG GCCAATAACACTTCCTACATCATCCCCACCCCAGTGATTAAGCATTTCCTCATGGACCTT CATCGATCGGGCAAATACAATGGCTACCCCTCCTTGGGGGTTAAGTACCTGCCCCTCGAC AATGCCAATTTGCGGCGACTCCTGGGGCTGACCGACTTGGAGAGGCGCCGAGAGGTGGAG GAGAACAGCGGCATACTCGTCACCGAGGTGGACGAGGAGCAGATGGGGTGCCAGTCAGGC GGGGGGGGGAGCACAAAGTGGGCAGTTTCATCGGGGGAAGCTTCAACGGGGGCAGCTTCA TCAGGGGAAGCTTCAATGGGGGCAGCTTCAACGGGGGCAGCTTCATCAGGGGAAGCTTCA ATGGGGGCAGCTTCAACGGGGGCAGCTTCACATGCAATTACTGCTGGGAGGGGCCCCCTT CCCGGGAGGCCGCCCATCACGCCCACCGCTCCCGCAGAGCCGCTCTGCTACGGACTGAAA AAGAACGACGTGCTCCTATCGGTAGAGGGAACGCAAATAAAAAGCGATGGGACGGTGACC CTCCGAGGAGACGAATCTGTAGACTTCCAGTTCCTCTTCAACGGGAAGTTCGTAGGAGAC CTATGCACCTGTAGAGTCGTGAGAGGGGGGCGCGTCCAAACAGCCCTCGTTAGAGTGAGT AGGGTTCATTACCTAGTTAGGCAACACAACTGGGATGTTCCAAATAAGTTTTTCATTTAT GGGGGGGTCGTCTTCACGACGCTGACGAGGAGTCTCTACGCCGATGAGGAGACAGACAAT GTCGAGGTGATGCGCCTACTGCAGTTTAATTTGTTTAAGAAGCAAAGGGACGACGAGATC GTCATCGTGAAGCGGATCCTCCCTTCGAAGCTGACCATCGGATTTAACTACCAAGACTGT ATAGTCCTTACAGTGAATGGAATCCCCGTGCGGAACTTGCAACACCTTGTGGGGGTGATT GACGGACGGGAGGGCCCCCTCGGGGGGGGGGTCGCCAAGAAGAGCACGCAGATGAAGCAG ATGGATCAGATGGGGGAGCGGCGGGGGACACCCTCTGAGGGGGACGCCAACCCCTATCTG AAGTTCACTTTAGAGGAGGATCCCTTTTTCCAAATGAAGGAGGAGAAGGATAACCTCCTG CACTTCCTCCTTCTCACTTCCAATGGGCAACAGGTGCCACTTGTTTTGCTGCGCGCCGAG GTCCAGCGGGAGTCCGCCGAGATTAGGCGCGTCTACGGCATCACGCGGGAGCGTTACGTG TACAGTGGTTAG
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  • Fasta :-

    MKLSLQSYSCCAAVAALVVIRGGGDPWGGFFPRCAAHQMGERPPPTDERNYAENNGGKLG GEIEKEEEEHLHIDREVKGDDSHFTFDESSPTGGGKNVKVGLPLAKYTPGYVRPVLSDKR VTKGEAPGGENNLPSGDPQDGPPYLSKQQCGASFRDNAKADEHPSEGSHHDGEEPPSAAP NIWRRKKKNILQHRMSPTERGQEGYPPVEEKQTHREASNSDGSNLHESNFRGGSSYTEGS HQVGQLKLRTNRDDQKMMKGIFTPQVVRAMKEYLLKGGKKYGSGQVGHLGGSSDQQHGGD RRTGSNQAIHPLSGEAIHPLSSEAIHPLRFFPANFAPHSGDSQRGAARRSIINEKLRRNL SQITLSVSAAEERTKERVEEGAEVGAQSVAQSGGADDGEAGALRKIYKGVVKLYVDITEP SLETIWSNSPPKRVSGSGFVIEGGLILTNAHNVAYSTRILVRKHGCSKKYEGAVLHVAHE ADMALLTVADGSFYEDVSALELGPLPSLRDDVITVGYPSGGDKLSVTKGIVSRIEVQYYR HSNSRLLLTQIDAPMNPGNSGGPALVKGKVAGICFQLLKMANNTSYIIPTPVIKHFLMDL HRSGKYNGYPSLGVKYLPLDNANLRRLLGLTDLERRREVEENSGILVTEVDEEQMGCQSG GGGSTKWAVSSGEASTGAASSGEASMGAASTGAASSGEASMGAASTGAASHAITAGRGPL PGRPPITPTAPAEPLCYGLKKNDVLLSVEGTQIKSDGTVTLRGDESVDFQFLFNGKFVGD LCTCRVVRGGRVQTALVRVSRVHYLVRQHNWDVPNKFFIYGGVVFTTLTRSLYADEETDN VEVMRLLQFNLFKKQRDDEIVIVKRILPSKLTIGFNYQDCIVLTVNGIPVRNLQHLVGVI DGREGPLGGGVAKKSTQMKQMDQMGERRGTPSEGDANPYLKFTLEEDPFFQMKEEKDNLL HFLLLTSNGQQVPLVLLRAEVQRESAEIRRVYGITRERYVYSG

    No Results
IDSitePositionGscoreIscore
PVX_088155T6910.5250.211
IDSitePositionGscoreIscore
PVX_088155T6910.5250.211
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_088155218 SHREASNSDG0.997unspPVX_088155218 SHREASNSDG0.997unspPVX_088155218 SHREASNSDG0.997unspPVX_088155235 SRGGSSYTEG0.991unspPVX_088155435 SPKRVSGSGF0.992unspPVX_088155519 SVGYPSGGDK0.994unspPVX_088155670 SKWAVSSGEA0.994unspPVX_088155680 STGAASSGEA0.992unspPVX_088155695 STGAASSGEA0.992unspPVX_088155930 TERRGTPSEG0.996unspPVX_088155932 SRGTPSEGDA0.991unspPVX_088155196 SQHRMSPTER0.997unspPVX_088155213 TEEKQTHREA0.992unsp
PVX_088155      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India