PVX_089045 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_089045OTHER0.9999900.0000090.000001
No Results

  • Fasta :-

    >PVX_089045 MTSLNNVEDEEDKNAANAEMDSPKGNGQVAVSTSYHNSDKDGAEKGQPFTQNGNAKNGAN SACTPAAATAIAGANFEKKRKAEAVEERYQVDRTLDGMSSAPNVDKLDMMEKSSIGGMNK HAKTGDGGVSCADPIQRSSKGVDKLNVDTYMHAHIHTDTHAHNHAPTHAHARMGKCDTNT EFQSDDAANGKATPGDAKEEQRGVEEESSKTELAQSDTSKEEKAKDKPNEHAKMKNEAKE RHAQLEANNKKKESYKYFIDYSKYRSKNNVTFSTKYKDSCVNLSSDKLTCYGDKGWSSVF VNNGADIGKWYYEIKIEEPVQNFHFLGYKDKVIKVNPYIRVGFACRYMRYDYPIGTDKYS YCVNSKNGRIFNNSISYDCMEPIKVGDIIGCYLNLKNKNTYNFDPRSDKKLYEYLQNGIL CDPKDPPILKKNYGSSIFFSLNGQIKKNAFVDIYEGFYHPSVSLYMGASAKINLGPHFAY NHLNDYIPCVFMEPPIIL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_089045.fa Sequence name : PVX_089045 Sequence length : 498 VALUES OF COMPUTED PARAMETERS Coef20 : 3.170 CoefTot : -0.034 ChDiff : -1 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.053 0.829 0.148 0.437 MesoH : -0.441 0.125 -0.418 0.256 MuHd_075 : 10.410 3.595 2.145 1.666 MuHd_095 : 21.521 18.745 7.859 5.322 MuHd_100 : 19.504 17.554 6.315 5.270 MuHd_105 : 13.977 12.363 3.514 4.067 Hmax_075 : -15.925 -5.950 -5.947 -0.779 Hmax_095 : -3.800 3.800 -2.671 1.780 Hmax_100 : -3.800 6.500 -2.671 2.600 Hmax_105 : -7.400 2.625 -4.251 1.592 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9402 0.0598 DFMC : 0.9361 0.0639
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 498 PVX_089045 MTSLNNVEDEEDKNAANAEMDSPKGNGQVAVSTSYHNSDKDGAEKGQPFTQNGNAKNGANSACTPAAATAIAGANFEKKR 80 KAEAVEERYQVDRTLDGMSSAPNVDKLDMMEKSSIGGMNKHAKTGDGGVSCADPIQRSSKGVDKLNVDTYMHAHIHTDTH 160 AHNHAPTHAHARMGKCDTNTEFQSDDAANGKATPGDAKEEQRGVEEESSKTELAQSDTSKEEKAKDKPNEHAKMKNEAKE 240 RHAQLEANNKKKESYKYFIDYSKYRSKNNVTFSTKYKDSCVNLSSDKLTCYGDKGWSSVFVNNGADIGKWYYEIKIEEPV 320 QNFHFLGYKDKVIKVNPYIRVGFACRYMRYDYPIGTDKYSYCVNSKNGRIFNNSISYDCMEPIKVGDIIGCYLNLKNKNT 400 YNFDPRSDKKLYEYLQNGILCDPKDPPILKKNYGSSIFFSLNGQIKKNAFVDIYEGFYHPSVSLYMGASAKINLGPHFAY 480 NHLNDYIPCVFMEPPIIL 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_089045 13 VEDEEDK|NA 0.066 . PVX_089045 24 AEMDSPK|GN 0.102 . PVX_089045 40 SYHNSDK|DG 0.078 . PVX_089045 45 DKDGAEK|GQ 0.057 . PVX_089045 56 TQNGNAK|NG 0.074 . PVX_089045 78 AGANFEK|KR 0.062 . PVX_089045 79 GANFEKK|RK 0.112 . PVX_089045 80 ANFEKKR|KA 0.387 . PVX_089045 81 NFEKKRK|AE 0.084 . PVX_089045 88 AEAVEER|YQ 0.090 . PVX_089045 93 ERYQVDR|TL 0.104 . PVX_089045 106 SAPNVDK|LD 0.063 . PVX_089045 112 KLDMMEK|SS 0.082 . PVX_089045 120 SIGGMNK|HA 0.080 . PVX_089045 123 GMNKHAK|TG 0.094 . PVX_089045 137 CADPIQR|SS 0.110 . PVX_089045 140 PIQRSSK|GV 0.317 . PVX_089045 144 SSKGVDK|LN 0.064 . PVX_089045 172 PTHAHAR|MG 0.108 . PVX_089045 175 AHARMGK|CD 0.164 . PVX_089045 191 DDAANGK|AT 0.064 . PVX_089045 198 ATPGDAK|EE 0.061 . PVX_089045 202 DAKEEQR|GV 0.136 . PVX_089045 210 VEEESSK|TE 0.059 . PVX_089045 220 AQSDTSK|EE 0.067 . PVX_089045 223 DTSKEEK|AK 0.073 . PVX_089045 225 SKEEKAK|DK 0.080 . PVX_089045 227 EEKAKDK|PN 0.075 . PVX_089045 233 KPNEHAK|MK 0.085 . PVX_089045 235 NEHAKMK|NE 0.077 . PVX_089045 239 KMKNEAK|ER 0.082 . PVX_089045 241 KNEAKER|HA 0.101 . PVX_089045 250 QLEANNK|KK 0.058 . PVX_089045 251 LEANNKK|KE 0.095 . PVX_089045 252 EANNKKK|ES 0.142 . PVX_089045 256 KKKESYK|YF 0.077 . PVX_089045 263 YFIDYSK|YR 0.066 . PVX_089045 265 IDYSKYR|SK 0.163 . PVX_089045 267 YSKYRSK|NN 0.058 . PVX_089045 275 NVTFSTK|YK 0.065 . PVX_089045 277 TFSTKYK|DS 0.104 . PVX_089045 287 VNLSSDK|LT 0.061 . PVX_089045 294 LTCYGDK|GW 0.070 . PVX_089045 309 NGADIGK|WY 0.067 . PVX_089045 315 KWYYEIK|IE 0.075 . PVX_089045 329 FHFLGYK|DK 0.060 . PVX_089045 331 FLGYKDK|VI 0.064 . PVX_089045 334 YKDKVIK|VN 0.062 . PVX_089045 340 KVNPYIR|VG 0.085 . PVX_089045 346 RVGFACR|YM 0.082 . PVX_089045 349 FACRYMR|YD 0.308 . PVX_089045 358 YPIGTDK|YS 0.064 . PVX_089045 366 SYCVNSK|NG 0.059 . PVX_089045 369 VNSKNGR|IF 0.102 . PVX_089045 384 DCMEPIK|VG 0.061 . PVX_089045 396 GCYLNLK|NK 0.058 . PVX_089045 398 YLNLKNK|NT 0.064 . PVX_089045 406 TYNFDPR|SD 0.132 . PVX_089045 409 FDPRSDK|KL 0.127 . PVX_089045 410 DPRSDKK|LY 0.110 . PVX_089045 424 GILCDPK|DP 0.060 . PVX_089045 430 KDPPILK|KN 0.056 . PVX_089045 431 DPPILKK|NY 0.126 . PVX_089045 446 SLNGQIK|KN 0.067 . PVX_089045 447 LNGQIKK|NA 0.104 . PVX_089045 471 YMGASAK|IN 0.059 . ____________________________^_________________

  • Fasta :-

    >PVX_089045 GCGGCACATCGGAAGTGCAACCTTTAATTTGGCAATTTTGCGCAAGTCAAAATTTAGGGC GAAAACAAATGTGACTGTTTCGAAGGGGTAGAAAAAGTGTGCCCACTTTGCTTCGCGTTT GTGCTGCGCTCGCGATGCGCTTGTGCCTCGCCTGCGATGCGTGTGTGCCGACTTGGTGCC ACCTTGGTAGCAGCACTGCGCCAAAGCTGCGCGAAGATTGCGCCCCAATTAGAATGGTAG TTGCCCGGCCACCGGTAGAGACCCCCCGGAGTGCACTGGCATCCATCGGAAAACGCGCGA CCCTCGATGGGTAATGACTGCGGGTGGCGGCCATAATGGTAACAGGGGAAAATAAAAGCA AAGATAGCAAGAGAGGAAAAAACGTAAGAAGTGAGACGCAAGAGAGAAGCAAACGAGACG CAAACGAGTCGCAAACGAGACGCAAACAAGACGCAAACGTGATAGCATAGTAGCTCCGAA CGGACAACCAATACGCACTCAGACGGGGAATCATGACGAGTCTTAATAACGTCGAAGACG AAGAGGACAAAAATGCTGCAAACGCAGAGATGGATTCGCCAAAGGGGAATGGGCAAGTGG CAGTGAGCACCAGTTATCACAATTCGGATAAAGATGGAGCCGAAAAGGGACAACCTTTTA CGCAAAATGGGAATGCAAAGAATGGTGCGAACAGTGCATGCACACCTGCCGCGGCTACGG CAATCGCTGGCGCTAACTTTGAGAAGAAGAGAAAAGCGGAAGCAGTGGAGGAACGGTACC AAGTGGACAGGACCCTTGACGGCATGAGCAGTGCCCCCAACGTTGATAAATTGGACATGA TGGAGAAGTCATCTATTGGTGGCATGAACAAGCATGCGAAAACAGGGGATGGAGGCGTCA GCTGTGCAGACCCCATCCAGAGGAGCAGCAAGGGGGTCGATAAGCTGAATGTGGACACGT ACATGCATGCTCATATTCATACGGATACCCATGCGCATAATCATGCGCCTACTCATGCGC ACGCGCGTATGGGCAAGTGTGACACGAACACAGAATTCCAAAGTGATGACGCTGCTAATG GGAAAGCGACCCCTGGGGATGCTAAAGAGGAACAAAGAGGGGTCGAAGAAGAGAGTAGCA AAACTGAGTTAGCACAAAGTGACACAAGTAAGGAGGAAAAGGCGAAAGACAAACCGAATG AACATGCTAAGATGAAGAACGAAGCTAAGGAAAGACATGCACAACTGGAAGCGAATAACA AGAAAAAGGAAAGCTACAAATATTTTATTGATTATAGCAAATATAGGAGCAAAAATAATG TGACGTTCTCTACCAAGTATAAGGACAGCTGTGTGAATTTAAGCAGCGATAAGCTCACCT GTTATGGAGACAAAGGATGGTCAAGTGTTTTCGTGAATAATGGGGCCGACATCGGGAAAT GGTACTACGAAATAAAAATTGAAGAGCCTGTGCAAAATTTCCACTTCTTAGGTTATAAGG ACAAAGTGATAAAGGTAAACCCATATATAAGAGTCGGTTTCGCTTGCAGATACATGCGGT ATGACTATCCCATAGGAACAGACAAATATAGCTACTGCGTCAATAGCAAAAATGGGAGAA TTTTTAACAACTCCATAAGCTACGACTGCATGGAGCCAATTAAAGTAGGTGATATCATTG GGTGCTACTTAAATTTGAAGAACAAAAATACGTATAACTTCGATCCAAGATCTGATAAGA AATTGTATGAATATTTACAAAATGGCATTCTGTGTGATCCAAAAGATCCACCCATCTTAA AGAAAAACTACGGTTCGTCTATTTTTTTCTCCCTAAATGGGCAAATAAAGAAAAACGCCT TTGTTGATATTTATGAAGGGTTTTATCATCCGTCTGTGAGTTTGTACATGGGTGCCTCGG CAAAAATTAATTTGGGTCCTCATTTTGCGTATAACCATTTGAATGATTACATCCCGTGTG TGTTTATGGAGCCACCGATTATTCTGTGA
  • Download Fasta

  • Fasta :-

    MTSLNNVEDEEDKNAANAEMDSPKGNGQVAVSTSYHNSDKDGAEKGQPFTQNGNAKNGAN SACTPAAATAIAGANFEKKRKAEAVEERYQVDRTLDGMSSAPNVDKLDMMEKSSIGGMNK HAKTGDGGVSCADPIQRSSKGVDKLNVDTYMHAHIHTDTHAHNHAPTHAHARMGKCDTNT EFQSDDAANGKATPGDAKEEQRGVEEESSKTELAQSDTSKEEKAKDKPNEHAKMKNEAKE RHAQLEANNKKKESYKYFIDYSKYRSKNNVTFSTKYKDSCVNLSSDKLTCYGDKGWSSVF VNNGADIGKWYYEIKIEEPVQNFHFLGYKDKVIKVNPYIRVGFACRYMRYDYPIGTDKYS YCVNSKNGRIFNNSISYDCMEPIKVGDIIGCYLNLKNKNTYNFDPRSDKKLYEYLQNGIL CDPKDPPILKKNYGSSIFFSLNGQIKKNAFVDIYEGFYHPSVSLYMGASAKINLGPHFAY NHLNDYIPCVFMEPPIIL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_08904538 SSYHNSDKDG0.995unspPVX_089045219 SQSDTSKEEK0.997unsp
PVX_089045      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India