PVX_089485 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
PVX_089485SP0.4617680.5359980.002234CS pos: 23-24. LNG-YI. Pr: 0.8471
No Results

  • Fasta :-

    >PVX_089485 MKVLKFLWIPVVAIILLVVVLNGYIYFNQDNLIFAKEKINPNKVRPYGSHFEDVYLDMED GSRFKCWFVKAEDHENKPVFLYYLGKGGYVEKYVKLFDMIVQRVDVSIFSCSNRGCGTNK GNPSEEQLYKDALVPLNYLKQKNTKQLFIFGNSMGGAVALETASKHQKDLYGLILENPFL SVKDMSEQNYPFLNFFLLSFDVLIRTKMDNKEKIKKIHVPLLINTSELDKMIPPDHSSKL FELCPSKHKFRYFSKFGTHNNIIKVDDGSYHASLKKFVQTAISLREGKGEPQIPPPPRAA A
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_089485.fa Sequence name : PVX_089485 Sequence length : 301 VALUES OF COMPUTED PARAMETERS Coef20 : 4.748 CoefTot : -0.715 ChDiff : 9 ZoneTo : 29 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.100 2.841 0.409 0.945 MesoH : -0.776 0.225 -0.526 0.206 MuHd_075 : 10.946 13.492 4.280 3.123 MuHd_095 : 20.429 17.595 6.606 5.317 MuHd_100 : 19.374 14.742 6.631 4.699 MuHd_105 : 19.360 12.357 6.301 4.218 Hmax_075 : 17.762 29.167 5.402 7.460 Hmax_095 : 19.425 29.225 5.313 8.225 Hmax_100 : 19.600 29.200 5.351 8.300 Hmax_105 : 20.100 26.200 4.418 7.569 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9305 0.0695 DFMC : 0.9721 0.0279
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 301 PVX_089485 MKVLKFLWIPVVAIILLVVVLNGYIYFNQDNLIFAKEKINPNKVRPYGSHFEDVYLDMEDGSRFKCWFVKAEDHENKPVF 80 LYYLGKGGYVEKYVKLFDMIVQRVDVSIFSCSNRGCGTNKGNPSEEQLYKDALVPLNYLKQKNTKQLFIFGNSMGGAVAL 160 ETASKHQKDLYGLILENPFLSVKDMSEQNYPFLNFFLLSFDVLIRTKMDNKEKIKKIHVPLLINTSELDKMIPPDHSSKL 240 FELCPSKHKFRYFSKFGTHNNIIKVDDGSYHASLKKFVQTAISLREGKGEPQIPPPPRAAA 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_089485 2 -----MK|VL 0.055 . PVX_089485 5 --MKVLK|FL 0.071 . PVX_089485 36 DNLIFAK|EK 0.060 . PVX_089485 38 LIFAKEK|IN 0.064 . PVX_089485 43 EKINPNK|VR 0.061 . PVX_089485 45 INPNKVR|PY 0.147 . PVX_089485 63 DMEDGSR|FK 0.077 . PVX_089485 65 EDGSRFK|CW 0.065 . PVX_089485 70 FKCWFVK|AE 0.071 . PVX_089485 77 AEDHENK|PV 0.074 . PVX_089485 86 FLYYLGK|GG 0.063 . PVX_089485 92 KGGYVEK|YV 0.075 . PVX_089485 95 YVEKYVK|LF 0.059 . PVX_089485 103 FDMIVQR|VD 0.078 . PVX_089485 114 IFSCSNR|GC 0.154 . PVX_089485 120 RGCGTNK|GN 0.070 . PVX_089485 130 SEEQLYK|DA 0.079 . PVX_089485 140 VPLNYLK|QK 0.062 . PVX_089485 142 LNYLKQK|NT 0.071 . PVX_089485 145 LKQKNTK|QL 0.082 . PVX_089485 165 ALETASK|HQ 0.059 . PVX_089485 168 TASKHQK|DL 0.099 . PVX_089485 183 NPFLSVK|DM 0.073 . PVX_089485 205 SFDVLIR|TK 0.074 . PVX_089485 207 DVLIRTK|MD 0.056 . PVX_089485 211 RTKMDNK|EK 0.064 . PVX_089485 213 KMDNKEK|IK 0.063 . PVX_089485 215 DNKEKIK|KI 0.067 . PVX_089485 216 NKEKIKK|IH 0.088 . PVX_089485 230 NTSELDK|MI 0.063 . PVX_089485 239 PPDHSSK|LF 0.060 . PVX_089485 247 FELCPSK|HK 0.058 . PVX_089485 249 LCPSKHK|FR 0.060 . PVX_089485 251 PSKHKFR|YF 0.175 . PVX_089485 255 KFRYFSK|FG 0.068 . PVX_089485 264 THNNIIK|VD 0.075 . PVX_089485 275 SYHASLK|KF 0.061 . PVX_089485 276 YHASLKK|FV 0.155 . PVX_089485 285 QTAISLR|EG 0.077 . PVX_089485 288 ISLREGK|GE 0.130 . PVX_089485 298 QIPPPPR|AA 0.119 . ____________________________^_________________

  • Fasta :-

    >PVX_089485 ATATGTTATTCCTTTTGTGCGCGCCCCCTCCTTTTTTTCCCAATGTATATTAATTAACCC ATTTGTGTAAACATCCCATTTTGTACACTATTTTTTTTTTTTTTTTTTTTGCATTTTTCT TCGAATGCCCGCGCGTGCTCAGGCTGGCATTTTCTTATGCATGCTGACTGCAATTCGAAC AGTGCGCCCCTGAACACATACGCCTGTGGGACACGCGTCGCAGCTGCGAGTTTGTCGATT TACATCACGTTGAACGCTGACCACCCGTTCGACGCGAAGCAGAGTTAATCTCTCCCCCCC CCGCGATTGCACAAACGTGTACAGATACACGGCAAACGGGAAAGCAACACCGACCCCTGC CTTCGTCGCACGCGCGCATTTGTAATTTGTACCTCCTGGCCATACAGCCATACAGCCCTG CGTCCATACAGCCCTGCGTCCATACAGCCTTACGTCCATACAGCCTTACGTCCATACAGC CCTACGTCCACGCATCACTACACTCCTACTCCCTTACTCTCTCACTCCCGTACGCTCTTG CGCTGCCCACTTGTCCGCCCATTTATCGGCGCTCAGATTCAGTTCGCCCAATTCGAACCC CCCTCCATTGTTGTGTAACAAAATGAAGGTACTCAAGTTCTTGTGGATCCCCGTGGTTGC GATTATACTCCTCGTGGTGGTGTTGAATGGCTACATCTATTTCAACCAGGACAATCTGAT CTTCGCAAAAGAAAAGATCAACCCCAACAAAGTCCGTCCATATGGCAGCCATTTCGAAGA TGTGTACCTAGATATGGAGGACGGAAGCAGATTTAAGTGCTGGTTTGTAAAAGCGGAAGA CCACGAAAACAAGCCTGTGTTCCTCTACTACCTCGGAAAGGGTGGCTATGTCGAGAAGTA CGTCAAGCTGTTCGACATGATTGTGCAGAGGGTGGACGTCAGCATCTTCTCCTGCTCCAA CAGGGGCTGCGGAACGAACAAAGGAAATCCATCGGAGGAACAACTGTACAAGGATGCCCT GGTGCCCCTCAACTACTTGAAGCAGAAAAACACCAAGCAGCTGTTCATCTTCGGAAACTC CATGGGAGGTGCAGTGGCCCTCGAAACGGCATCCAAGCACCAAAAGGACCTGTACGGCCT GATTTTGGAAAACCCATTTCTGAGCGTGAAGGACATGTCGGAGCAGAACTACCCCTTCTT AAACTTCTTCCTCTTGAGTTTTGACGTTTTGATTAGAACCAAAATGGACAATAAGGAGAA GATAAAAAAAATACACGTCCCTCTGTTGATTAACACTTCCGAACTGGACAAAATGATCCC CCCTGATCACTCGAGCAAGTTATTTGAGCTCTGCCCGAGCAAGCACAAGTTCAGGTACTT CTCCAAGTTTGGGACGCACAACAACATCATAAAGGTGGACGACGGTTCGTATCACGCCTC GTTGAAAAAGTTCGTCCAAACGGCCATCAGTTTGCGCGAGGGGAAAGGAGAGCCACAGAT TCCGCCTCCCCCCCGAGCAGCGGCGTAG
  • Download Fasta

  • Fasta :-

    MKVLKFLWIPVVAIILLVVVLNGYIYFNQDNLIFAKEKINPNKVRPYGSHFEDVYLDMED GSRFKCWFVKAEDHENKPVFLYYLGKGGYVEKYVKLFDMIVQRVDVSIFSCSNRGCGTNK GNPSEEQLYKDALVPLNYLKQKNTKQLFIFGNSMGGAVALETASKHQKDLYGLILENPFL SVKDMSEQNYPFLNFFLLSFDVLIRTKMDNKEKIKKIHVPLLINTSELDKMIPPDHSSKL FELCPSKHKFRYFSKFGTHNNIIKVDDGSYHASLKKFVQTAISLREGKGEPQIPPPPRAA A

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_089485181 SNPFLSVKDM0.996unspPVX_089485283 SQTAISLREG0.994unsp
PVX_089485      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India