PVX_089655 | ubiquitin carboxyl-terminal hydrolase 13, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_089655OTHER0.9998890.0000970.000015
No Results

  • Fasta :-

    >PVX_089655 MADIKSVVASISASIREPSKDDVIYLDECSVTGLKDIFDEGVFVDLVSFESFSLKCLKYN YSRAQQGGGEGPGSHAGSSHAGSSHAGSSHAGRFYLNVKKKKKLLDKIEKSEIKNLTLNV EGGFKETRVYEYHCEYALYDVEANLYINLDEVEDERVKSICQSIISHKNELKKESPNKWV NEIKESKYAKDLVQLPNITIKNENLECAVCKAKKNIWLNLSDGYIGCGRKIFNYGGGCLN NEEGAALKHFYDSGKKYPLVVKLGTITKEGEADVFSYADDENDSVIDPYIDVHLKNLGIN ITSLNKTEVTTLEKEIKENQNINFSSILDRDTQLVCKEGKVGFLNLGNTCYMNCALQVFL SIKEVSYRYIGNQFDFLLTLNPKTKTHHDLFIQYAKLCCMIYKGDYISKKKNYIKKFKEE CQERNVEVTYDSDVDEEDCVSINPSMFRTCLNQKGNPFCNNNQQDIFEFLTYLLNELIEN ENVIFQRLLNGSNSNKRKIDQLESVEQGGAPEKEDKFKKSNNGSGGSGGVSDGEEQQKSE KSIFNLFTFEMDQTIVSDEYNLSKSSFHNNILSLDIPLDSALLKSLEAESSPASPPQVTL LDCLNHFIKKDHIEEYYSEEKKRKILAQKDIKFKSFPPYLFIHIKRFYADENWSAKKINI PVQTDEYINLEFMRSEKSTPGGDNSSGYAEGQGKNSTGASHSGKSNEEHIMQQHKDLLDS LLDLGFEKEKVLEAIKKVKVKNVNNCISYIYGEDSVELDLQEISQGTDVNSENLNSIVSM GVNKNVAMASLLINKNDLQKSIDYIFSNLDALTESKCAAIVNRNKCEDGLANYELVASIV HMGSNANSGHYICYIKDGSQWYVYNDNKIGLCDANKGKDTAYIHLYKRI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_089655.fa Sequence name : PVX_089655 Sequence length : 889 VALUES OF COMPUTED PARAMETERS Coef20 : 4.393 CoefTot : 0.655 ChDiff : -23 ZoneTo : 16 KR : 2 DE : 1 CleavSite : 18 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.894 1.394 0.105 0.464 MesoH : -0.709 0.189 -0.413 0.161 MuHd_075 : 11.913 1.605 2.205 1.792 MuHd_095 : 16.996 17.642 6.440 5.230 MuHd_100 : 24.393 20.365 7.054 6.701 MuHd_105 : 26.822 19.573 6.364 7.016 Hmax_075 : 10.850 11.550 1.932 4.293 Hmax_095 : 5.900 17.600 1.933 5.620 Hmax_100 : 17.700 22.200 4.040 7.160 Hmax_105 : 16.012 18.725 3.431 6.107 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9790 0.0210 DFMC : 0.9766 0.0234
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 889 PVX_089655 MADIKSVVASISASIREPSKDDVIYLDECSVTGLKDIFDEGVFVDLVSFESFSLKCLKYNYSRAQQGGGEGPGSHAGSSH 80 AGSSHAGSSHAGRFYLNVKKKKKLLDKIEKSEIKNLTLNVEGGFKETRVYEYHCEYALYDVEANLYINLDEVEDERVKSI 160 CQSIISHKNELKKESPNKWVNEIKESKYAKDLVQLPNITIKNENLECAVCKAKKNIWLNLSDGYIGCGRKIFNYGGGCLN 240 NEEGAALKHFYDSGKKYPLVVKLGTITKEGEADVFSYADDENDSVIDPYIDVHLKNLGINITSLNKTEVTTLEKEIKENQ 320 NINFSSILDRDTQLVCKEGKVGFLNLGNTCYMNCALQVFLSIKEVSYRYIGNQFDFLLTLNPKTKTHHDLFIQYAKLCCM 400 IYKGDYISKKKNYIKKFKEECQERNVEVTYDSDVDEEDCVSINPSMFRTCLNQKGNPFCNNNQQDIFEFLTYLLNELIEN 480 ENVIFQRLLNGSNSNKRKIDQLESVEQGGAPEKEDKFKKSNNGSGGSGGVSDGEEQQKSEKSIFNLFTFEMDQTIVSDEY 560 NLSKSSFHNNILSLDIPLDSALLKSLEAESSPASPPQVTLLDCLNHFIKKDHIEEYYSEEKKRKILAQKDIKFKSFPPYL 640 FIHIKRFYADENWSAKKINIPVQTDEYINLEFMRSEKSTPGGDNSSGYAEGQGKNSTGASHSGKSNEEHIMQQHKDLLDS 720 LLDLGFEKEKVLEAIKKVKVKNVNNCISYIYGEDSVELDLQEISQGTDVNSENLNSIVSMGVNKNVAMASLLINKNDLQK 800 SIDYIFSNLDALTESKCAAIVNRNKCEDGLANYELVASIVHMGSNANSGHYICYIKDGSQWYVYNDNKIGLCDANKGKDT 880 AYIHLYKRI 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ......... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_089655 5 --MADIK|SV 0.108 . PVX_089655 16 SISASIR|EP 0.104 . PVX_089655 20 SIREPSK|DD 0.070 . PVX_089655 35 CSVTGLK|DI 0.069 . PVX_089655 55 FESFSLK|CL 0.066 . PVX_089655 58 FSLKCLK|YN 0.061 . PVX_089655 63 LKYNYSR|AQ 0.100 . PVX_089655 93 GSSHAGR|FY 0.146 . PVX_089655 99 RFYLNVK|KK 0.058 . PVX_089655 100 FYLNVKK|KK 0.067 . PVX_089655 101 YLNVKKK|KK 0.088 . PVX_089655 102 LNVKKKK|KL 0.124 . PVX_089655 103 NVKKKKK|LL 0.176 . PVX_089655 107 KKKLLDK|IE 0.061 . PVX_089655 110 LLDKIEK|SE 0.074 . PVX_089655 114 IEKSEIK|NL 0.061 . PVX_089655 125 NVEGGFK|ET 0.060 . PVX_089655 128 GGFKETR|VY 0.081 . PVX_089655 156 DEVEDER|VK 0.074 . PVX_089655 158 VEDERVK|SI 0.080 . PVX_089655 168 QSIISHK|NE 0.062 . PVX_089655 172 SHKNELK|KE 0.062 . PVX_089655 173 HKNELKK|ES 0.103 . PVX_089655 178 KKESPNK|WV 0.099 . PVX_089655 184 KWVNEIK|ES 0.063 . PVX_089655 187 NEIKESK|YA 0.070 . PVX_089655 190 KESKYAK|DL 0.105 . PVX_089655 201 LPNITIK|NE 0.062 . PVX_089655 211 LECAVCK|AK 0.069 . PVX_089655 213 CAVCKAK|KN 0.065 . PVX_089655 214 AVCKAKK|NI 0.100 . PVX_089655 229 GYIGCGR|KI 0.093 . PVX_089655 230 YIGCGRK|IF 0.077 . PVX_089655 248 EEGAALK|HF 0.064 . PVX_089655 255 HFYDSGK|KY 0.064 . PVX_089655 256 FYDSGKK|YP 0.068 . PVX_089655 262 KYPLVVK|LG 0.055 . PVX_089655 268 KLGTITK|EG 0.064 . PVX_089655 295 YIDVHLK|NL 0.072 . PVX_089655 306 NITSLNK|TE 0.051 . PVX_089655 314 EVTTLEK|EI 0.055 . PVX_089655 317 TLEKEIK|EN 0.071 . PVX_089655 330 FSSILDR|DT 0.131 . PVX_089655 337 DTQLVCK|EG 0.061 . PVX_089655 340 LVCKEGK|VG 0.061 . PVX_089655 363 QVFLSIK|EV 0.072 . PVX_089655 368 IKEVSYR|YI 0.199 . PVX_089655 383 LLTLNPK|TK 0.058 . PVX_089655 385 TLNPKTK|TH 0.089 . PVX_089655 396 LFIQYAK|LC 0.064 . PVX_089655 403 LCCMIYK|GD 0.068 . PVX_089655 409 KGDYISK|KK 0.059 . PVX_089655 410 GDYISKK|KN 0.104 . PVX_089655 411 DYISKKK|NY 0.104 . PVX_089655 415 KKKNYIK|KF 0.061 . PVX_089655 416 KKNYIKK|FK 0.179 . PVX_089655 418 NYIKKFK|EE 0.073 . PVX_089655 424 KEECQER|NV 0.125 . PVX_089655 448 INPSMFR|TC 0.075 . PVX_089655 454 RTCLNQK|GN 0.060 . PVX_089655 487 ENVIFQR|LL 0.095 . PVX_089655 496 NGSNSNK|RK 0.078 . PVX_089655 497 GSNSNKR|KI 0.340 . PVX_089655 498 SNSNKRK|ID 0.099 . PVX_089655 513 QGGAPEK|ED 0.056 . PVX_089655 516 APEKEDK|FK 0.068 . PVX_089655 518 EKEDKFK|KS 0.075 . PVX_089655 519 KEDKFKK|SN 0.227 . PVX_089655 538 DGEEQQK|SE 0.075 . PVX_089655 541 EQQKSEK|SI 0.086 . PVX_089655 564 DEYNLSK|SS 0.072 . PVX_089655 584 LDSALLK|SL 0.096 . PVX_089655 609 CLNHFIK|KD 0.075 . PVX_089655 610 LNHFIKK|DH 0.132 . PVX_089655 621 EYYSEEK|KR 0.050 . PVX_089655 622 YYSEEKK|RK 0.097 . PVX_089655 623 YSEEKKR|KI 0.255 . PVX_089655 624 SEEKKRK|IL 0.104 . PVX_089655 629 RKILAQK|DI 0.073 . PVX_089655 632 LAQKDIK|FK 0.061 . PVX_089655 634 QKDIKFK|SF 0.093 . PVX_089655 645 YLFIHIK|RF 0.073 . PVX_089655 646 LFIHIKR|FY 0.249 . PVX_089655 656 DENWSAK|KI 0.071 . PVX_089655 657 ENWSAKK|IN 0.114 . PVX_089655 674 INLEFMR|SE 0.109 . PVX_089655 677 EFMRSEK|ST 0.234 . PVX_089655 694 YAEGQGK|NS 0.064 . PVX_089655 704 GASHSGK|SN 0.172 . PVX_089655 715 HIMQQHK|DL 0.087 . PVX_089655 728 LDLGFEK|EK 0.052 . PVX_089655 730 LGFEKEK|VL 0.068 . PVX_089655 736 KVLEAIK|KV 0.058 . PVX_089655 737 VLEAIKK|VK 0.084 . PVX_089655 739 EAIKKVK|VK 0.062 . PVX_089655 741 IKKVKVK|NV 0.096 . PVX_089655 784 VSMGVNK|NV 0.070 . PVX_089655 795 ASLLINK|ND 0.052 . PVX_089655 800 NKNDLQK|SI 0.104 . PVX_089655 816 DALTESK|CA 0.063 . PVX_089655 823 CAAIVNR|NK 0.098 . PVX_089655 825 AIVNRNK|CE 0.059 . PVX_089655 856 HYICYIK|DG 0.066 . PVX_089655 868 YVYNDNK|IG 0.051 . PVX_089655 876 GLCDANK|GK 0.075 . PVX_089655 878 CDANKGK|DT 0.079 . PVX_089655 887 AYIHLYK|RI 0.065 . PVX_089655 888 YIHLYKR|I- 0.168 . ____________________________^_________________

  • Fasta :-

    >PVX_089655 ATGGCGGACATTAAAAGCGTTGTGGCCTCCATTTCGGCGAGCATCCGCGAGCCGTCGAAG GATGACGTGATCTACTTGGACGAGTGCAGCGTGACCGGCCTCAAGGACATCTTCGACGAG GGCGTGTTCGTGGACCTGGTTTCCTTCGAGAGCTTCAGCCTCAAGTGCCTCAAGTACAAC TACAGCCGCGCGCAGCAGGGCGGCGGCGAGGGCCCGGGCAGCCACGCAGGTAGCAGCCAC GCAGGCAGCAGCCACGCAGGTAGCAGCCACGCAGGGAGGTTCTACCTGAATGTGAAGAAG AAAAAAAAACTGCTGGACAAGATAGAAAAAAGCGAAATAAAAAACCTGACGCTGAACGTG GAAGGAGGCTTCAAGGAAACCAGGGTGTATGAGTACCACTGCGAGTATGCCCTGTATGAT GTGGAGGCCAACCTGTATATCAACCTAGACGAGGTGGAAGACGAGCGAGTAAAAAGCATT TGCCAGAGCATAATCAGTCACAAGAATGAGCTGAAGAAGGAGAGCCCCAACAAGTGGGTG AACGAAATAAAGGAGAGCAAATACGCAAAGGACCTTGTGCAGCTACCGAACATTACCATC AAAAATGAAAACCTCGAGTGTGCCGTCTGCAAAGCGAAGAAAAACATATGGCTGAACCTA TCCGATGGGTACATTGGGTGCGGGAGGAAAATATTCAATTACGGAGGGGGCTGCCTCAAC AATGAAGAAGGAGCAGCATTAAAGCATTTCTACGACAGTGGAAAGAAGTACCCCCTGGTT GTTAAACTAGGAACCATCACCAAGGAGGGAGAAGCAGATGTGTTCTCCTACGCAGATGAT GAAAATGATAGTGTAATAGATCCCTACATAGATGTGCATCTGAAGAACCTAGGAATTAAC ATAACCAGTTTGAACAAAACGGAAGTTACAACCTTGGAGAAAGAAATAAAAGAAAATCAA AATATAAATTTTTCGTCTATACTGGATAGGGATACACAGCTGGTATGTAAAGAGGGAAAG GTTGGGTTCCTCAATTTAGGAAATACATGCTACATGAATTGCGCCTTGCAAGTGTTCCTC TCCATCAAAGAGGTCAGCTACAGGTATATAGGCAACCAATTCGACTTCCTCCTAACCCTA AACCCTAAAACGAAGACGCACCATGATTTGTTCATTCAGTATGCCAAACTGTGCTGCATG ATTTATAAAGGAGATTACATTAGCAAGAAAAAAAATTATATAAAAAAATTTAAAGAAGAA TGTCAGGAGAGAAATGTGGAAGTAACCTACGACAGCGATGTGGACGAAGAGGACTGTGTG AGCATCAACCCGTCAATGTTTCGAACGTGTTTAAATCAAAAGGGGAACCCCTTCTGCAAC AACAACCAGCAGGACATCTTCGAGTTTTTAACTTACCTCCTGAATGAGCTGATTGAAAAT GAAAATGTCATTTTTCAGAGGCTGCTAAACGGGAGCAACTCCAATAAGAGGAAAATCGAC CAGCTGGAGAGCGTCGAGCAGGGGGGGGCGCCCGAAAAGGAGGACAAATTTAAGAAGAGC AACAATGGAAGCGGAGGTAGCGGCGGAGTTAGCGACGGGGAGGAGCAGCAGAAAAGTGAG AAATCCATTTTCAACCTCTTCACCTTCGAAATGGACCAAACCATTGTGAGCGATGAGTAT AACCTGAGCAAGAGCTCCTTCCACAACAACATCCTCTCCCTGGACATCCCCCTTGATAGT GCCCTTTTGAAAAGTTTAGAAGCAGAGAGTTCACCTGCGTCCCCCCCGCAAGTGACGCTG CTAGACTGTCTCAACCATTTTATAAAAAAGGATCACATTGAGGAGTACTACAGTGAGGAG AAAAAAAGGAAAATCTTGGCTCAAAAGGATATCAAATTTAAGAGCTTCCCTCCGTACCTC TTTATTCACATTAAAAGATTCTACGCAGATGAGAATTGGAGCGCTAAGAAGATAAACATC CCCGTGCAGACAGATGAATACATCAATTTGGAGTTCATGCGATCGGAGAAGAGTACCCCT GGGGGGGATAACTCCAGTGGGTATGCGGAAGGACAAGGGAAGAACTCCACTGGTGCTTCC CATTCCGGGAAAAGCAACGAAGAGCACATCATGCAACAGCATAAGGATCTCTTGGACTCC CTGCTAGACCTCGGGTTTGAAAAGGAAAAAGTGTTGGAGGCCATCAAAAAGGTCAAAGTG AAAAATGTGAACAACTGCATTTCGTACATCTACGGGGAAGACTCGGTGGAGCTGGACCTT CAAGAAATCAGCCAGGGGACGGACGTCAATTCGGAAAACTTAAATTCCATCGTCAGCATG GGCGTCAACAAAAACGTGGCCATGGCCTCCCTCCTCATAAACAAAAACGACTTGCAGAAG TCGATTGACTACATCTTTTCCAATCTGGACGCCCTCACGGAGAGCAAGTGCGCCGCGATC GTCAACCGGAACAAGTGCGAGGACGGCTTGGCCAACTACGAACTCGTCGCGTCCATCGTG CACATGGGAAGCAACGCCAACTCGGGCCACTACATCTGCTACATAAAGGACGGTTCTCAG TGGTACGTATACAACGACAACAAGATTGGCCTGTGCGACGCGAACAAGGGCAAGGACACG GCGTACATCCACTTGTACAAGAGGATCTGA
  • Download Fasta

  • Fasta :-

    MADIKSVVASISASIREPSKDDVIYLDECSVTGLKDIFDEGVFVDLVSFESFSLKCLKYN YSRAQQGGGEGPGSHAGSSHAGSSHAGSSHAGRFYLNVKKKKKLLDKIEKSEIKNLTLNV EGGFKETRVYEYHCEYALYDVEANLYINLDEVEDERVKSICQSIISHKNELKKESPNKWV NEIKESKYAKDLVQLPNITIKNENLECAVCKAKKNIWLNLSDGYIGCGRKIFNYGGGCLN NEEGAALKHFYDSGKKYPLVVKLGTITKEGEADVFSYADDENDSVIDPYIDVHLKNLGIN ITSLNKTEVTTLEKEIKENQNINFSSILDRDTQLVCKEGKVGFLNLGNTCYMNCALQVFL SIKEVSYRYIGNQFDFLLTLNPKTKTHHDLFIQYAKLCCMIYKGDYISKKKNYIKKFKEE CQERNVEVTYDSDVDEEDCVSINPSMFRTCLNQKGNPFCNNNQQDIFEFLTYLLNELIEN ENVIFQRLLNGSNSNKRKIDQLESVEQGGAPEKEDKFKKSNNGSGGSGGVSDGEEQQKSE KSIFNLFTFEMDQTIVSDEYNLSKSSFHNNILSLDIPLDSALLKSLEAESSPASPPQVTL LDCLNHFIKKDHIEEYYSEEKKRKILAQKDIKFKSFPPYLFIHIKRFYADENWSAKKINI PVQTDEYINLEFMRSEKSTPGGDNSSGYAEGQGKNSTGASHSGKSNEEHIMQQHKDLLDS LLDLGFEKEKVLEAIKKVKVKNVNNCISYIYGEDSVELDLQEISQGTDVNSENLNSIVSM GVNKNVAMASLLINKNDLQKSIDYIFSNLDALTESKCAAIVNRNKCEDGLANYELVASIV HMGSNANSGHYICYIKDGSQWYVYNDNKIGLCDANKGKDTAYIHLYKRI

  • title: Active Site
  • coordinates: N345,C350,H850,D866
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_089655284 SDENDSVIDP0.996unspPVX_089655284 SDENDSVIDP0.996unspPVX_089655284 SDENDSVIDP0.996unspPVX_089655432 SVTYDSDVDE0.995unspPVX_089655539 SEQQKSEKSI0.991unspPVX_089655702 SGASHSGKSN0.996unspPVX_089655705 SHSGKSNEEH0.997unspPVX_08965514 SSISASIREP0.993unspPVX_08965519 SIREPSKDDV0.994unsp
PVX_089655      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India