PVX_090280 | PST-A protein

UniProt_ID: A5K686

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs:
Computed_GO_Functions:
Computed_GO_Process_IDs:
Computed_GO_Processes:
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	PVX_090280	OTHER	0.999630	0.000282	0.000088

No Results

Fasta :-
>PVX_090280 MADNASRDEEICLRRTRVDGAPKHDSFLNKDGLLLRSYGWLVKNAIGIIILIHGIKAHAR LNFLKPNVEVVSNDKVIVKDENNYYVYEDSWVEYFNKHGYSVFGLDLQGHGLSDGFENLC HNVKEFDDFAYDVMQYIRNIQDSLNDGTVDDGGSSLPFGEDKICERRKPLPTYVVGLSLG GSIALRMLQILGKSQNENTGLNIRGCISISPMITVEKLPSKNSFLFQRVCLPLSKFIADR IPTVRLIAMYPYKMYPYIKYFIEYDKIQSKQAITCRFGYELLKAIDNLDNDIKYMPKNIP VLIIHSKKDILCYYEGSLSFYNRLDVKNKEMHTLVDMEHILTWEPGNERVSKKIVEWIMG LSSEGGAASEGGSISEGSSTSEGSSTSEGSNTSEGGSTSEGSSTSEMVSMGSASL
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_090280.fa Sequence name : PVX_090280 Sequence length : 415 VALUES OF COMPUTED PARAMETERS Coef20 : 4.127 CoefTot : 0.141 ChDiff : -9 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.494 1.641 0.238 0.699 MesoH : -0.369 0.446 -0.289 0.189 MuHd_075 : 21.798 8.307 5.961 1.800 MuHd_095 : 30.404 9.488 6.407 5.112 MuHd_100 : 37.692 13.610 8.802 6.536 MuHd_105 : 36.774 16.486 9.552 6.894 Hmax_075 : -11.113 0.175 -2.205 -0.887 Hmax_095 : -6.913 2.713 -1.903 0.157 Hmax_100 : 4.400 7.600 0.574 2.480 Hmax_105 : 1.600 4.900 0.319 1.660 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8852 0.1148 DFMC : 0.8207 0.1793

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 415 PVX_090280 MADNASRDEEICLRRTRVDGAPKHDSFLNKDGLLLRSYGWLVKNAIGIIILIHGIKAHARLNFLKPNVEVVSNDKVIVKD 80 ENNYYVYEDSWVEYFNKHGYSVFGLDLQGHGLSDGFENLCHNVKEFDDFAYDVMQYIRNIQDSLNDGTVDDGGSSLPFGE 160 DKICERRKPLPTYVVGLSLGGSIALRMLQILGKSQNENTGLNIRGCISISPMITVEKLPSKNSFLFQRVCLPLSKFIADR 240 IPTVRLIAMYPYKMYPYIKYFIEYDKIQSKQAITCRFGYELLKAIDNLDNDIKYMPKNIPVLIIHSKKDILCYYEGSLSF 320 YNRLDVKNKEMHTLVDMEHILTWEPGNERVSKKIVEWIMGLSSEGGAASEGGSISEGSSTSEGSSTSEGSNTSEGGSTSE 400 GSSTSEMVSMGSASL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_090280 7 MADNASR|DE 0.103 . PVX_090280 14 DEEICLR|RT 0.069 . PVX_090280 15 EEICLRR|TR 0.102 . PVX_090280 17 ICLRRTR|VD 0.201 . PVX_090280 23 RVDGAPK|HD 0.060 . PVX_090280 30 HDSFLNK|DG 0.074 . PVX_090280 36 KDGLLLR|SY 0.128 . PVX_090280 43 SYGWLVK|NA 0.067 . PVX_090280 56 ILIHGIK|AH 0.057 . PVX_090280 60 GIKAHAR|LN 0.099 . PVX_090280 65 ARLNFLK|PN 0.069 . PVX_090280 75 EVVSNDK|VI 0.057 . PVX_090280 79 NDKVIVK|DE 0.064 . PVX_090280 97 WVEYFNK|HG 0.062 . PVX_090280 124 NLCHNVK|EF 0.062 . PVX_090280 138 DVMQYIR|NI 0.104 . PVX_090280 162 LPFGEDK|IC 0.065 . PVX_090280 166 EDKICER|RK 0.060 . PVX_090280 167 DKICERR|KP 0.089 . PVX_090280 168 KICERRK|PL 0.094 . PVX_090280 186 GGSIALR|ML 0.106 . PVX_090280 193 MLQILGK|SQ 0.076 . PVX_090280 204 NTGLNIR|GC 0.082 . PVX_090280 217 PMITVEK|LP 0.059 . PVX_090280 221 VEKLPSK|NS 0.059 . PVX_090280 228 NSFLFQR|VC 0.072 . PVX_090280 235 VCLPLSK|FI 0.069 . PVX_090280 240 SKFIADR|IP 0.088 . PVX_090280 245 DRIPTVR|LI 0.086 . PVX_090280 253 IAMYPYK|MY 0.065 . PVX_090280 259 KMYPYIK|YF 0.070 . PVX_090280 266 YFIEYDK|IQ 0.062 . PVX_090280 270 YDKIQSK|QA 0.077 . PVX_090280 276 KQAITCR|FG 0.110 . PVX_090280 283 FGYELLK|AI 0.062 . PVX_090280 293 NLDNDIK|YM 0.063 . PVX_090280 297 DIKYMPK|NI 0.063 . PVX_090280 307 VLIIHSK|KD 0.059 . PVX_090280 308 LIIHSKK|DI 0.152 . PVX_090280 323 SLSFYNR|LD 0.111 . PVX_090280 327 YNRLDVK|NK 0.060 . PVX_090280 329 RLDVKNK|EM 0.074 . PVX_090280 349 WEPGNER|VS 0.072 . PVX_090280 352 GNERVSK|KI 0.198 . PVX_090280 353 NERVSKK|IV 0.261 . ____________________________^_________________

Fasta :-
>PVX_090280 ATGGCCGATAATGCATCGCGCGATGAAGAAATATGCTTGAGGAGAACTCGGGTTGATGGG GCACCAAAGCATGATTCGTTTTTAAATAAAGATGGGTTGCTATTAAGAAGCTACGGATGG TTAGTAAAAAACGCCATAGGCATTATAATACTAATTCATGGAATTAAAGCTCACGCGAGA CTAAACTTTTTAAAACCCAATGTAGAGGTAGTAAGCAACGATAAGGTTATAGTGAAGGAT GAAAATAATTACTACGTTTATGAAGATAGCTGGGTAGAATATTTTAATAAACATGGGTAT TCCGTTTTTGGGTTAGATTTACAAGGCCACGGTTTATCAGATGGATTTGAAAATCTCTGC CATAATGTAAAAGAGTTTGACGATTTCGCTTATGATGTGATGCAGTACATTAGGAACATT CAGGATAGCTTAAATGATGGTACTGTTGACGATGGGGGTAGTAGTTTGCCATTTGGAGAG GACAAGATATGTGAGAGGAGGAAGCCGCTTCCCACTTATGTAGTCGGTTTATCTCTGGGT GGAAGTATCGCTTTAAGGATGCTACAAATATTAGGAAAGTCGCAAAATGAAAATACAGGA CTAAACATCAGAGGGTGCATCTCCATCTCTCCAATGATAACTGTTGAGAAGCTACCATCC AAAAATTCGTTTTTATTTCAGCGCGTTTGTCTCCCATTGTCCAAGTTCATTGCTGATCGG ATCCCAACGGTCAGACTTATTGCCATGTATCCTTATAAAATGTATCCGTATATTAAATAT TTTATTGAGTATGATAAAATTCAATCTAAGCAGGCCATCACGTGTAGATTTGGCTATGAG CTTTTGAAAGCAATCGACAATTTAGACAATGATATAAAATACATGCCTAAAAACATTCCT GTGCTGATTATTCACTCTAAGAAGGACATTTTGTGCTACTATGAAGGATCCCTATCGTTC TACAACCGACTCGATGTAAAGAATAAGGAGATGCACACACTGGTGGATATGGAGCATATC CTCACTTGGGAGCCCGGGAATGAGAGGGTTTCGAAGAAGATCGTCGAGTGGATTATGGGT CTGTCATCGGAGGGGGGCGCCGCATCTGAGGGGGGCAGCATATCTGAGGGGAGCAGCACA TCTGAGGGGAGCAGCACATCTGAGGGGAGCAACACATCTGAGGGGGGCAGCACATCTGAG GGGAGCAGCACATCTGAAATGGTTAGCATGGGAAGCGCCTCTCTCTAA
Download Fasta

Fasta :-

MADNASRDEEICLRRTRVDGAPKHDSFLNKDGLLLRSYGWLVKNAIGIIILIHGIKAHAR LNFLKPNVEVVSNDKVIVKDENNYYVYEDSWVEYFNKHGYSVFGLDLQGHGLSDGFENLC HNVKEFDDFAYDVMQYIRNIQDSLNDGTVDDGGSSLPFGEDKICERRKPLPTYVVGLSLG GSIALRMLQILGKSQNENTGLNIRGCISISPMITVEKLPSKNSFLFQRVCLPLSKFIADR IPTVRLIAMYPYKMYPYIKYFIEYDKIQSKQAITCRFGYELLKAIDNLDNDIKYMPKNIP VLIIHSKKDILCYYEGSLSFYNRLDVKNKEMHTLVDMEHILTWEPGNERVSKKIVEWIMG LSSEGGAASEGGSISEGSSTSEGSSTSEGSNTSEGGSTSEGSSTSEMVSMGSASL

Haloperoxidase

No Results

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	PVX_090280	T	392	0.710	0.043	PVX_090280	T	386	0.672	0.045	PVX_090280	T	398	0.658	0.045	PVX_090280	S	390	0.646	0.019	PVX_090280	T	380	0.642	0.045	PVX_090280	S	393	0.631	0.124	PVX_090280	S	387	0.607	0.077	PVX_090280	S	384	0.597	0.018	PVX_090280	T	404	0.586	0.064	PVX_090280	S	385	0.580	0.050	PVX_090280	S	399	0.576	0.050	PVX_090280	S	397	0.564	0.051	PVX_090280	S	378	0.560	0.021	PVX_090280	S	412	0.558	0.056	PVX_090280	S	381	0.549	0.063	PVX_090280	S	379	0.545	0.050	PVX_090280	S	375	0.543	0.075	PVX_090280	S	414	0.542	0.018	PVX_090280	S	409	0.514	0.095	PVX_090280	S	373	0.504	0.027	PVX_090280	S	405	0.502	0.035

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	PVX_090280	T	392	0.710	0.043	PVX_090280	T	386	0.672	0.045	PVX_090280	T	398	0.658	0.045	PVX_090280	S	390	0.646	0.019	PVX_090280	T	380	0.642	0.045	PVX_090280	S	393	0.631	0.124	PVX_090280	S	387	0.607	0.077	PVX_090280	S	384	0.597	0.018	PVX_090280	T	404	0.586	0.064	PVX_090280	S	385	0.580	0.050	PVX_090280	S	399	0.576	0.050	PVX_090280	S	397	0.564	0.051	PVX_090280	S	378	0.560	0.021	PVX_090280	S	412	0.558	0.056	PVX_090280	S	381	0.549	0.063	PVX_090280	S	379	0.545	0.050	PVX_090280	S	375	0.543	0.075	PVX_090280	S	414	0.542	0.018	PVX_090280	S	409	0.514	0.095	PVX_090280	S	373	0.504	0.027	PVX_090280	S	405	0.502	0.035

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	PVX_090280	379 S	SEGSSTSEG	0.997	unsp	PVX_090280	379 S	SEGSSTSEG	0.997	unsp	PVX_090280	379 S	SEGSSTSEG	0.997	unsp	PVX_090280	385 S	SEGSSTSEG	0.997	unsp	PVX_090280	397 S	SEGGSTSEG	0.996	unsp	PVX_090280	403 S	SEGSSTSEM	0.997	unsp	PVX_090280	143 S	NIQDSLNDG	0.994	unsp	PVX_090280	351 S	NERVSKKIV	0.996	unsp

PVX_090280

PVX_090280 | PST-A protein

ID's

UniProt_ID: A5K686

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs:

Computed_GO_Functions:

Computed_GO_Process_IDs:

Computed_GO_Processes:

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Haloperoxidase

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India