PVX_091615 | ATP-dependent zinc metalloprotease FTSH, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_091615OTHER0.9410420.0013950.057563
No Results

  • Fasta :-

    >PVX_091615 MNKPHILLKTARGMHNCGVTGRGGLVEEVLSCRKYLGALLNVPQVGGAAEGSTPAIGIVS GNRKGARRLLHVLKKYVRICCREGGLKRREMPKLGEAARRLLQMRGGEAVFPHEGKTHHD HFPREEASLGKPDQGRAPLDGWRKRSSWHNWPFTEGGFPPPKRYEQAAIGLQQKRRQFHQ MVRVYLSKAPKGFESFEKTDRKKGDGVSSPSSKGSSPNSPNSPKPDEERNHKRLDNFLFF VLFLLLVSLFLFVDSNGLYNEVTQNDFFINYLAKGYVERIKLVNKDYVKAYLNVHGMSKY HQKYVSFRIGNSDAFERRVEIIQREMNIQRDQLIEVQYTNEANVLHEVKSYIPTILFFLL FAFIFQKITLKNVANSGMDRLFKMNKMNPISKQHLKTDVRFSNVAGMKQAKEEIMEFVDF LKTPSKYEALGAKMPKGALLCGAPGTGKTLLAKAVAGEANVPFFNISGSDFIEVFVGIGP SRVRELFAQARKHAPSIIFIDEIDAVGRKRSKGGFAAGGNDERENTLNQMLVEMDGFHTS NDKVVVLAGTNRVDILDPAITRPGRFDRIVNISKPDINERSEIFQVHLKNLKLHHSLDIQ SISYLLASLTPGFVGADIANVVNEGAIQCARRSNLVGVQVKDFELAIERVIGGLPKSSSL ISPFEKKIISYHETGHALIGWLLEFADPVLKVSILPRSNGALGYSQHLSEEVFLFSREAL LDKVAVILGGRAAEELFIGKITTGAIDDLNKVTQLSYSYVSQYGMNKEIGLVSFQPNSSS DYSFYRPHSECLAHLIDNEVRCLIETQYNRVKSILRTHEEQVHKLADLLFRKETISYQDI VQCIGERPFPVKSAYEKFVKANPYRLGGQESGGGSGEVGRLNGGNGVAAIGEAEKATQGA HAAPQLGSPQLAAPNETLAEQHPAGKKGPPGEGSDDGNKGSKLSHVGTPR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_091615.fa Sequence name : PVX_091615 Sequence length : 950 VALUES OF COMPUTED PARAMETERS Coef20 : 3.618 CoefTot : -1.698 ChDiff : 25 ZoneTo : 26 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.953 3.247 0.527 1.060 MesoH : -0.342 0.534 -0.308 0.286 MuHd_075 : 22.089 6.150 4.694 4.701 MuHd_095 : 30.160 17.774 9.147 6.354 MuHd_100 : 33.567 16.645 10.982 6.471 MuHd_105 : 43.357 21.320 13.471 7.843 Hmax_075 : 9.200 4.900 0.727 2.853 Hmax_095 : 14.500 11.200 3.773 4.670 Hmax_100 : 14.500 7.700 3.773 4.340 Hmax_105 : 14.700 11.200 3.960 4.020 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8811 0.1189 DFMC : 0.8979 0.1021
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 950 PVX_091615 MNKPHILLKTARGMHNCGVTGRGGLVEEVLSCRKYLGALLNVPQVGGAAEGSTPAIGIVSGNRKGARRLLHVLKKYVRIC 80 CREGGLKRREMPKLGEAARRLLQMRGGEAVFPHEGKTHHDHFPREEASLGKPDQGRAPLDGWRKRSSWHNWPFTEGGFPP 160 PKRYEQAAIGLQQKRRQFHQMVRVYLSKAPKGFESFEKTDRKKGDGVSSPSSKGSSPNSPNSPKPDEERNHKRLDNFLFF 240 VLFLLLVSLFLFVDSNGLYNEVTQNDFFINYLAKGYVERIKLVNKDYVKAYLNVHGMSKYHQKYVSFRIGNSDAFERRVE 320 IIQREMNIQRDQLIEVQYTNEANVLHEVKSYIPTILFFLLFAFIFQKITLKNVANSGMDRLFKMNKMNPISKQHLKTDVR 400 FSNVAGMKQAKEEIMEFVDFLKTPSKYEALGAKMPKGALLCGAPGTGKTLLAKAVAGEANVPFFNISGSDFIEVFVGIGP 480 SRVRELFAQARKHAPSIIFIDEIDAVGRKRSKGGFAAGGNDERENTLNQMLVEMDGFHTSNDKVVVLAGTNRVDILDPAI 560 TRPGRFDRIVNISKPDINERSEIFQVHLKNLKLHHSLDIQSISYLLASLTPGFVGADIANVVNEGAIQCARRSNLVGVQV 640 KDFELAIERVIGGLPKSSSLISPFEKKIISYHETGHALIGWLLEFADPVLKVSILPRSNGALGYSQHLSEEVFLFSREAL 720 LDKVAVILGGRAAEELFIGKITTGAIDDLNKVTQLSYSYVSQYGMNKEIGLVSFQPNSSSDYSFYRPHSECLAHLIDNEV 800 RCLIETQYNRVKSILRTHEEQVHKLADLLFRKETISYQDIVQCIGERPFPVKSAYEKFVKANPYRLGGQESGGGSGEVGR 880 LNGGNGVAAIGEAEKATQGAHAAPQLGSPQLAAPNETLAEQHPAGKKGPPGEGSDDGNKGSKLSHVGTPR 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 .......P........................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ...................................................................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PVX_091615 3 ----MNK|PH 0.056 . PVX_091615 9 KPHILLK|TA 0.076 . PVX_091615 12 ILLKTAR|GM 0.131 . PVX_091615 22 NCGVTGR|GG 0.093 . PVX_091615 33 EEVLSCR|KY 0.077 . PVX_091615 34 EVLSCRK|YL 0.086 . PVX_091615 63 GIVSGNR|KG 0.069 . PVX_091615 64 IVSGNRK|GA 0.131 . PVX_091615 67 GNRKGAR|RL 0.108 . PVX_091615 68 NRKGARR|LL 0.144 . PVX_091615 74 RLLHVLK|KY 0.060 . PVX_091615 75 LLHVLKK|YV 0.180 . PVX_091615 78 VLKKYVR|IC 0.080 . PVX_091615 82 YVRICCR|EG 0.091 . PVX_091615 87 CREGGLK|RR 0.055 . PVX_091615 88 REGGLKR|RE 0.158 . PVX_091615 89 EGGLKRR|EM 0.134 . PVX_091615 93 KRREMPK|LG 0.081 . PVX_091615 99 KLGEAAR|RL 0.105 . PVX_091615 100 LGEAARR|LL 0.121 . PVX_091615 105 RRLLQMR|GG 0.155 . PVX_091615 116 VFPHEGK|TH 0.065 . PVX_091615 124 HHDHFPR|EE 0.081 . PVX_091615 131 EEASLGK|PD 0.057 . PVX_091615 136 GKPDQGR|AP 0.094 . PVX_091615 143 APLDGWR|KR 0.073 . PVX_091615 144 PLDGWRK|RS 0.074 . PVX_091615 145 LDGWRKR|SS 0.408 . PVX_091615 162 GGFPPPK|RY 0.069 . PVX_091615 163 GFPPPKR|YE 0.215 . PVX_091615 174 AIGLQQK|RR 0.057 . PVX_091615 175 IGLQQKR|RQ 0.138 . PVX_091615 176 GLQQKRR|QF 0.246 . PVX_091615 183 QFHQMVR|VY 0.070 . PVX_091615 188 VRVYLSK|AP 0.065 . PVX_091615 191 YLSKAPK|GF 0.089 . PVX_091615 198 GFESFEK|TD 0.071 . PVX_091615 201 SFEKTDR|KK 0.112 . PVX_091615 202 FEKTDRK|KG 0.074 . PVX_091615 203 EKTDRKK|GD 0.120 . PVX_091615 213 VSSPSSK|GS 0.094 . PVX_091615 224 NSPNSPK|PD 0.066 . PVX_091615 229 PKPDEER|NH 0.071 . PVX_091615 232 DEERNHK|RL 0.119 . PVX_091615 233 EERNHKR|LD 0.177 . PVX_091615 274 FINYLAK|GY 0.068 . PVX_091615 279 AKGYVER|IK 0.082 . PVX_091615 281 GYVERIK|LV 0.069 . PVX_091615 285 RIKLVNK|DY 0.072 . PVX_091615 289 VNKDYVK|AY 0.060 . PVX_091615 299 NVHGMSK|YH 0.063 . PVX_091615 303 MSKYHQK|YV 0.127 . PVX_091615 308 QKYVSFR|IG 0.084 . PVX_091615 317 NSDAFER|RV 0.151 . PVX_091615 318 SDAFERR|VE 0.160 . PVX_091615 324 RVEIIQR|EM 0.095 . PVX_091615 330 REMNIQR|DQ 0.095 . PVX_091615 349 NVLHEVK|SY 0.074 . PVX_091615 367 FAFIFQK|IT 0.061 . PVX_091615 371 FQKITLK|NV 0.070 . PVX_091615 380 ANSGMDR|LF 0.086 . PVX_091615 383 GMDRLFK|MN 0.116 . PVX_091615 386 RLFKMNK|MN 0.065 . PVX_091615 392 KMNPISK|QH 0.060 . PVX_091615 396 ISKQHLK|TD 0.058 . PVX_091615 400 HLKTDVR|FS 0.093 . PVX_091615 408 SNVAGMK|QA 0.078 . PVX_091615 411 AGMKQAK|EE 0.070 . PVX_091615 422 EFVDFLK|TP 0.062 . PVX_091615 426 FLKTPSK|YE 0.063 . PVX_091615 433 YEALGAK|MP 0.065 . PVX_091615 436 LGAKMPK|GA 0.073 . PVX_091615 448 GAPGTGK|TL 0.057 . PVX_091615 453 GKTLLAK|AV 0.078 . PVX_091615 482 VGIGPSR|VR 0.069 . PVX_091615 484 IGPSRVR|EL 0.085 . PVX_091615 491 ELFAQAR|KH 0.087 . PVX_091615 492 LFAQARK|HA 0.087 . PVX_091615 508 EIDAVGR|KR 0.100 . PVX_091615 509 IDAVGRK|RS 0.083 . PVX_091615 510 DAVGRKR|SK 0.320 . PVX_091615 512 VGRKRSK|GG 0.072 . PVX_091615 523 AGGNDER|EN 0.074 . PVX_091615 543 FHTSNDK|VV 0.060 . PVX_091615 552 VLAGTNR|VD 0.069 . PVX_091615 562 LDPAITR|PG 0.065 . PVX_091615 565 AITRPGR|FD 0.228 . PVX_091615 568 RPGRFDR|IV 0.579 *ProP* PVX_091615 574 RIVNISK|PD 0.060 . PVX_091615 580 KPDINER|SE 0.123 . PVX_091615 589 IFQVHLK|NL 0.056 . PVX_091615 592 VHLKNLK|LH 0.055 . PVX_091615 631 GAIQCAR|RS 0.087 . PVX_091615 632 AIQCARR|SN 0.212 . PVX_091615 641 LVGVQVK|DF 0.077 . PVX_091615 649 FELAIER|VI 0.082 . PVX_091615 656 VIGGLPK|SS 0.079 . PVX_091615 666 LISPFEK|KI 0.075 . PVX_091615 667 ISPFEKK|II 0.152 . PVX_091615 691 FADPVLK|VS 0.050 . PVX_091615 697 KVSILPR|SN 0.246 . PVX_091615 717 EVFLFSR|EA 0.068 . PVX_091615 723 REALLDK|VA 0.060 . PVX_091615 731 AVILGGR|AA 0.086 . PVX_091615 740 EELFIGK|IT 0.064 . PVX_091615 751 AIDDLNK|VT 0.054 . PVX_091615 767 SQYGMNK|EI 0.071 . PVX_091615 786 SDYSFYR|PH 0.121 . PVX_091615 801 LIDNEVR|CL 0.082 . PVX_091615 810 IETQYNR|VK 0.077 . PVX_091615 812 TQYNRVK|SI 0.080 . PVX_091615 816 RVKSILR|TH 0.081 . PVX_091615 824 HEEQVHK|LA 0.065 . PVX_091615 831 LADLLFR|KE 0.076 . PVX_091615 832 ADLLFRK|ET 0.077 . PVX_091615 847 VQCIGER|PF 0.067 . PVX_091615 852 ERPFPVK|SA 0.107 . PVX_091615 857 VKSAYEK|FV 0.096 . PVX_091615 860 AYEKFVK|AN 0.062 . PVX_091615 865 VKANPYR|LG 0.111 . PVX_091615 880 GSGEVGR|LN 0.121 . PVX_091615 895 AIGEAEK|AT 0.064 . PVX_091615 926 EQHPAGK|KG 0.067 . PVX_091615 927 QHPAGKK|GP 0.080 . PVX_091615 939 GSDDGNK|GS 0.056 . PVX_091615 942 DGNKGSK|LS 0.065 . PVX_091615 950 SHVGTPR|-- 0.099 . ____________________________^_________________

  • Fasta :-

    >PVX_091615 ATGAACAAGCCGCATATTCTTCTGAAAACCGCGAGGGGTATGCACAACTGTGGGGTGACG GGCCGCGGGGGCCTCGTGGAAGAGGTCCTGTCGTGCAGGAAGTACCTGGGGGCGCTGTTA AATGTACCCCAGGTAGGAGGGGCCGCGGAGGGAAGCACCCCTGCAATCGGCATCGTCAGC GGTAACCGCAAAGGGGCGAGACGGCTGCTTCACGTTTTGAAGAAGTACGTTCGGATCTGC TGCCGAGAGGGGGGCCTGAAAAGGAGGGAGATGCCCAAACTGGGTGAGGCAGCACGGCGT TTGCTGCAGATGAGGGGTGGAGAAGCGGTGTTCCCTCACGAGGGGAAGACCCACCATGAT CATTTCCCCAGGGAAGAGGCTTCCCTAGGGAAGCCCGACCAAGGGAGAGCTCCACTTGAC GGCTGGCGGAAGAGGAGCAGCTGGCATAACTGGCCCTTCACCGAGGGTGGATTTCCCCCC CCCAAAAGATACGAACAGGCAGCGATCGGTCTGCAGCAAAAGAGAAGGCAGTTCCACCAG ATGGTTCGAGTGTACCTGTCCAAGGCACCTAAGGGGTTCGAAAGTTTCGAGAAGACGGAT CGGAAGAAGGGGGACGGGGTGTCCTCCCCATCCTCCAAGGGGTCCTCCCCCAACTCTCCT AACTCCCCCAAACCGGATGAGGAGCGGAACCACAAACGGTTGGACAATTTCCTTTTCTTC GTCCTCTTCTTGCTGCTGGTGTCCCTCTTCCTGTTTGTGGATTCGAATGGGCTGTACAAC GAAGTGACGCAAAACGATTTTTTTATAAATTACCTGGCGAAGGGGTACGTGGAGAGGATC AAGCTGGTGAATAAGGACTACGTGAAGGCGTACCTCAACGTGCACGGCATGAGTAAGTAC CACCAGAAATACGTGAGCTTCCGCATAGGGAACAGCGACGCGTTCGAGCGGAGGGTGGAG ATCATCCAGAGGGAAATGAACATCCAGAGAGACCAACTGATAGAGGTGCAGTACACAAAT GAAGCGAATGTCTTACACGAAGTCAAGAGTTACATCCCCACCATCCTCTTCTTCCTCCTC TTCGCTTTTATTTTCCAAAAAATTACCCTAAAGAATGTTGCAAATAGCGGCATGGACCGC CTATTCAAAATGAATAAGATGAACCCCATAAGTAAACAGCACCTCAAAACAGATGTACGT TTCTCCAACGTTGCTGGGATGAAGCAAGCCAAAGAGGAAATAATGGAATTTGTGGATTTT TTAAAAACGCCCTCCAAGTATGAAGCTTTGGGGGCAAAGATGCCCAAAGGGGCTCTCCTC TGTGGTGCCCCAGGAACGGGGAAGACACTACTAGCCAAAGCGGTAGCAGGGGAAGCCAAC GTTCCCTTTTTTAACATAAGTGGCAGTGACTTTATAGAAGTTTTCGTCGGCATAGGACCC TCCAGGGTTAGGGAACTGTTTGCCCAAGCGAGGAAACATGCACCCTCAATTATATTCATT GACGAGATAGATGCAGTGGGTAGGAAGAGATCCAAAGGGGGGTTCGCCGCTGGGGGCAAT GACGAACGGGAAAATACGCTAAATCAAATGCTAGTCGAGATGGACGGATTCCACACATCA AATGATAAAGTGGTAGTCCTGGCAGGCACCAACAGGGTCGATATCCTAGACCCAGCTATC ACACGACCGGGTAGGTTCGATAGAATTGTTAACATAAGCAAGCCAGATATTAACGAACGC TCCGAGATCTTCCAGGTGCACTTAAAAAATTTAAAATTGCACCACTCATTGGACATACAA AGTATTAGCTACCTCTTAGCTTCTCTAACCCCAGGCTTCGTAGGAGCAGACATCGCTAAC GTGGTGAATGAAGGAGCCATTCAGTGTGCCCGGAGGTCTAACCTGGTTGGTGTTCAGGTG AAAGACTTTGAACTAGCCATCGAAAGAGTCATTGGCGGATTACCAAAGTCGTCTTCTCTC ATCTCTCCATTTGAAAAGAAAATAATCTCCTACCACGAAACGGGGCATGCACTCATCGGC TGGCTACTAGAATTTGCCGACCCCGTTTTGAAGGTCTCCATTTTGCCAAGAAGTAATGGA GCCCTAGGTTACTCTCAACACCTGTCTGAAGAAGTTTTTCTCTTTTCGAGAGAAGCCCTC TTAGATAAGGTGGCAGTCATTTTAGGGGGAAGGGCAGCTGAAGAGCTATTCATCGGGAAA ATCACAACTGGTGCCATCGACGATTTAAATAAAGTAACGCAACTGTCCTATTCTTACGTC TCTCAGTATGGAATGAATAAAGAAATCGGGCTGGTTTCCTTTCAACCGAACTCGTCTAGC GATTATAGCTTCTACAGACCGCACTCTGAGTGTCTCGCGCATCTGATAGACAACGAAGTG CGCTGCCTCATCGAGACGCAGTACAACAGAGTGAAATCCATTCTGCGTACACACGAGGAA CAGGTGCACAAGCTGGCCGACTTGCTCTTCCGGAAGGAGACCATCTCCTACCAGGACATC GTGCAGTGCATCGGCGAGCGCCCCTTCCCGGTCAAGTCCGCCTACGAGAAGTTCGTCAAG GCGAACCCGTACAGGTTGGGCGGTCAGGAAAGCGGCGGGGGGAGCGGCGAGGTAGGCCGC TTAAACGGGGGTAATGGCGTAGCTGCCATAGGGGAGGCCGAGAAAGCCACGCAGGGTGCA CATGCCGCTCCGCAGCTGGGCTCACCGCAGCTGGCCGCGCCGAACGAAACGCTCGCGGAG CAGCACCCCGCGGGGAAAAAGGGGCCCCCCGGGGAAGGCTCCGACGACGGGAACAAGGGC AGCAAGCTTTCGCACGTGGGCACCCCGCGCTGA
  • Download Fasta

  • Fasta :-

    MNKPHILLKTARGMHNCGVTGRGGLVEEVLSCRKYLGALLNVPQVGGAAEGSTPAIGIVS GNRKGARRLLHVLKKYVRICCREGGLKRREMPKLGEAARRLLQMRGGEAVFPHEGKTHHD HFPREEASLGKPDQGRAPLDGWRKRSSWHNWPFTEGGFPPPKRYEQAAIGLQQKRRQFHQ MVRVYLSKAPKGFESFEKTDRKKGDGVSSPSSKGSSPNSPNSPKPDEERNHKRLDNFLFF VLFLLLVSLFLFVDSNGLYNEVTQNDFFINYLAKGYVERIKLVNKDYVKAYLNVHGMSKY HQKYVSFRIGNSDAFERRVEIIQREMNIQRDQLIEVQYTNEANVLHEVKSYIPTILFFLL FAFIFQKITLKNVANSGMDRLFKMNKMNPISKQHLKTDVRFSNVAGMKQAKEEIMEFVDF LKTPSKYEALGAKMPKGALLCGAPGTGKTLLAKAVAGEANVPFFNISGSDFIEVFVGIGP SRVRELFAQARKHAPSIIFIDEIDAVGRKRSKGGFAAGGNDERENTLNQMLVEMDGFHTS NDKVVVLAGTNRVDILDPAITRPGRFDRIVNISKPDINERSEIFQVHLKNLKLHHSLDIQ SISYLLASLTPGFVGADIANVVNEGAIQCARRSNLVGVQVKDFELAIERVIGGLPKSSSL ISPFEKKIISYHETGHALIGWLLEFADPVLKVSILPRSNGALGYSQHLSEEVFLFSREAL LDKVAVILGGRAAEELFIGKITTGAIDDLNKVTQLSYSYVSQYGMNKEIGLVSFQPNSSS DYSFYRPHSECLAHLIDNEVRCLIETQYNRVKSILRTHEEQVHKLADLLFRKETISYQDI VQCIGERPFPVKSAYEKFVKANPYRLGGQESGGGSGEVGRLNGGNGVAAIGEAEKATQGA HAAPQLGSPQLAAPNETLAEQHPAGKKGPPGEGSDDGNKGSKLSHVGTPR

  • title: ATP binding site
  • coordinates: A443,P444,G445,T446,G447,K448,T449,L450,D501,N551
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_091615219 SSSPNSPNSP0.992unspPVX_091615219 SSSPNSPNSP0.992unspPVX_091615219 SSSPNSPNSP0.992unspPVX_091615222 SNSPNSPKPD0.998unspPVX_091615376 SNVANSGMDR0.99unspPVX_091615662 SSSLISPFEK0.993unspPVX_091615836 SKETISYQDI0.992unspPVX_091615147 SRKRSSWHNW0.992unspPVX_091615211 SVSSPSSKGS0.994unsp
PVX_091615      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India