PVX_092055 | GPI-anchor transamidase, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_092055SP0.0411860.9555780.003235CS pos: 20-21. AVA-PT. Pr: 0.3180
No Results

  • Fasta :-

    >PVX_092055 MELKKALLCCVLLAVKRAVAPTVYFSGLDIKNMTGKYKEIEERHAKQNVNDIFFRELKKS NYQLNSNIIALSTSRHYFNYRHTSNLLTAYKYLKHVGGNLDRNILLMVPFDQACNCRNIV EGTIFNEYEKPPSEDLKKKKMKENLYSHLHIDYKNDNIRDEQIRRVIRHRYDALTPVKNR LYTNGNRERNLFIYMTGHGGVSFFKIQDFNIVSSAEFSLYIQELLIKNIYKYIFVIIDTC QGYSFYDKTLHFLKKKKINNVFLMSSSDKNENSYSLHSSKYLGVSTVDRFTFYFFSYLEN MNRVYAHEPHKNAKAFSLYSILNYLKTQHLISTPTINSSKFSASMFMHSKNILFYDSSGF YVSKDAEGNALEGLGKHRYDASQRTDKTATRSTCLGDLITCGHVKNEIHTHMGNLYSRSS YYSNVEVFFKEESHFTDYYFTAERFAGGYLLPALLFLVVIALCLLFFLFT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_092055.fa Sequence name : PVX_092055 Sequence length : 470 VALUES OF COMPUTED PARAMETERS Coef20 : 4.771 CoefTot : 0.311 ChDiff : 17 ZoneTo : 28 KR : 4 DE : 1 CleavSite : 19 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.818 3.341 0.637 1.037 MesoH : -0.164 0.487 -0.299 0.304 MuHd_075 : 21.703 17.289 8.421 5.634 MuHd_095 : 32.015 22.278 8.296 7.809 MuHd_100 : 22.828 16.891 6.195 5.342 MuHd_105 : 21.208 14.847 4.595 5.302 Hmax_075 : 15.400 21.350 5.139 6.277 Hmax_095 : 16.275 23.012 5.030 6.151 Hmax_100 : 6.200 23.700 1.558 6.550 Hmax_105 : 14.700 17.033 3.397 5.860 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7427 0.2573 DFMC : 0.9547 0.0453
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 470 PVX_092055 MELKKALLCCVLLAVKRAVAPTVYFSGLDIKNMTGKYKEIEERHAKQNVNDIFFRELKKSNYQLNSNIIALSTSRHYFNY 80 RHTSNLLTAYKYLKHVGGNLDRNILLMVPFDQACNCRNIVEGTIFNEYEKPPSEDLKKKKMKENLYSHLHIDYKNDNIRD 160 EQIRRVIRHRYDALTPVKNRLYTNGNRERNLFIYMTGHGGVSFFKIQDFNIVSSAEFSLYIQELLIKNIYKYIFVIIDTC 240 QGYSFYDKTLHFLKKKKINNVFLMSSSDKNENSYSLHSSKYLGVSTVDRFTFYFFSYLENMNRVYAHEPHKNAKAFSLYS 320 ILNYLKTQHLISTPTINSSKFSASMFMHSKNILFYDSSGFYVSKDAEGNALEGLGKHRYDASQRTDKTATRSTCLGDLIT 400 CGHVKNEIHTHMGNLYSRSSYYSNVEVFFKEESHFTDYYFTAERFAGGYLLPALLFLVVIALCLLFFLFT 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_092055 4 ---MELK|KA 0.056 . PVX_092055 5 --MELKK|AL 0.083 . PVX_092055 16 CVLLAVK|RA 0.051 . PVX_092055 17 VLLAVKR|AV 0.181 . PVX_092055 31 FSGLDIK|NM 0.060 . PVX_092055 36 IKNMTGK|YK 0.106 . PVX_092055 38 NMTGKYK|EI 0.069 . PVX_092055 43 YKEIEER|HA 0.116 . PVX_092055 46 IEERHAK|QN 0.121 . PVX_092055 55 VNDIFFR|EL 0.100 . PVX_092055 58 IFFRELK|KS 0.111 . PVX_092055 59 FFRELKK|SN 0.118 . PVX_092055 75 IALSTSR|HY 0.093 . PVX_092055 81 RHYFNYR|HT 0.122 . PVX_092055 91 NLLTAYK|YL 0.070 . PVX_092055 94 TAYKYLK|HV 0.103 . PVX_092055 102 VGGNLDR|NI 0.073 . PVX_092055 117 DQACNCR|NI 0.096 . PVX_092055 130 IFNEYEK|PP 0.062 . PVX_092055 137 PPSEDLK|KK 0.073 . PVX_092055 138 PSEDLKK|KK 0.094 . PVX_092055 139 SEDLKKK|KM 0.113 . PVX_092055 140 EDLKKKK|MK 0.124 . PVX_092055 142 LKKKKMK|EN 0.075 . PVX_092055 154 HLHIDYK|ND 0.065 . PVX_092055 159 YKNDNIR|DE 0.098 . PVX_092055 164 IRDEQIR|RV 0.122 . PVX_092055 165 RDEQIRR|VI 0.111 . PVX_092055 168 QIRRVIR|HR 0.289 . PVX_092055 170 RRVIRHR|YD 0.085 . PVX_092055 178 DALTPVK|NR 0.051 . PVX_092055 180 LTPVKNR|LY 0.088 . PVX_092055 187 LYTNGNR|ER 0.066 . PVX_092055 189 TNGNRER|NL 0.118 . PVX_092055 205 GGVSFFK|IQ 0.064 . PVX_092055 227 IQELLIK|NI 0.065 . PVX_092055 231 LIKNIYK|YI 0.092 . PVX_092055 248 GYSFYDK|TL 0.063 . PVX_092055 254 KTLHFLK|KK 0.055 . PVX_092055 255 TLHFLKK|KK 0.118 . PVX_092055 256 LHFLKKK|KI 0.119 . PVX_092055 257 HFLKKKK|IN 0.111 . PVX_092055 269 LMSSSDK|NE 0.063 . PVX_092055 280 YSLHSSK|YL 0.082 . PVX_092055 289 GVSTVDR|FT 0.123 . PVX_092055 303 YLENMNR|VY 0.075 . PVX_092055 311 YAHEPHK|NA 0.064 . PVX_092055 314 EPHKNAK|AF 0.076 . PVX_092055 326 SILNYLK|TQ 0.052 . PVX_092055 340 PTINSSK|FS 0.070 . PVX_092055 350 SMFMHSK|NI 0.062 . PVX_092055 364 SGFYVSK|DA 0.089 . PVX_092055 376 ALEGLGK|HR 0.062 . PVX_092055 378 EGLGKHR|YD 0.092 . PVX_092055 384 RYDASQR|TD 0.086 . PVX_092055 387 ASQRTDK|TA 0.161 . PVX_092055 391 TDKTATR|ST 0.129 . PVX_092055 405 ITCGHVK|NE 0.061 . PVX_092055 418 MGNLYSR|SS 0.127 . PVX_092055 430 NVEVFFK|EE 0.063 . PVX_092055 444 YYFTAER|FA 0.109 . ____________________________^_________________

  • Fasta :-

    >PVX_092055 AAGCGGCTGAAAGGGCAAGGCAGCTGCTGAACGAGCAAGGCAGCCGCTAATCAGGTGAAG CCCCCCCCTGGAGGTTATCCACCGAAGGAGAGACGCACAAATGGAGCTGAAGAAGGCGCT CCTCTGCTGCGTGCTGCTGGCAGTCAAACGGGCAGTTGCGCCCACAGTGTACTTCTCCGG GCTGGACATAAAAAATATGACAGGCAAGTACAAAGAGATAGAAGAGAGGCATGCCAAACA AAATGTGAATGATATATTTTTTCGCGAATTAAAAAAATCGAATTATCAACTGAACAGCAA CATTATCGCACTGAGCACATCGAGGCATTATTTCAACTACAGACACACGAGCAATTTACT GACCGCCTATAAATACCTGAAGCATGTCGGGGGAAACCTAGACAGAAACATACTGCTTAT GGTGCCATTTGACCAAGCTTGCAATTGCAGGAACATAGTAGAAGGCACCATTTTTAACGA GTATGAGAAGCCTCCAAGTGAAGATTTAAAAAAAAAAAAAATGAAAGAAAATTTGTACAG CCATCTACATATAGACTATAAAAATGACAACATACGAGATGAACAAATAAGGAGAGTAAT TAGACATCGATATGATGCCTTAACTCCAGTCAAAAATAGGTTATACACAAATGGGAACAG AGAGAGAAATCTTTTTATATACATGACTGGCCACGGAGGAGTGTCATTTTTTAAAATCCA AGATTTCAACATTGTCAGCTCTGCAGAATTTAGCCTGTACATACAGGAGCTGCTCATAAA AAATATATACAAGTACATTTTTGTAATTATTGACACATGTCAGGGGTACAGCTTTTACGA TAAAACGCTACATTTTTTAAAAAAAAAAAAAATAAATAACGTGTTTTTAATGTCCTCCTC GGATAAGAACGAAAATAGCTACAGCTTACACTCGAGCAAATATTTAGGCGTTTCCACGGT CGATCGATTTACGTTTTATTTTTTTTCCTACCTGGAGAATATGAACAGAGTGTACGCACA CGAACCGCATAAAAATGCAAAGGCCTTTTCCCTATATAGCATCTTGAATTATTTAAAGAC GCAGCATTTGATATCGACTCCGACCATCAACAGTTCGAAATTTAGCGCCTCCATGTTTAT GCATAGTAAAAATATCCTTTTTTATGACTCCTCCGGTTTTTATGTTAGTAAAGACGCGGA GGGGAATGCTTTGGAGGGGCTGGGCAAACACCGTTACGACGCCAGCCAGAGGACAGACAA AACTGCAACCCGAAGTACCTGTCTGGGCGACTTAATCACATGTGGGCATGTGAAAAATGA AATACACACCCACATGGGGAACCTCTACTCGCGCAGCAGCTACTACAGCAACGTCGAGGT CTTCTTCAAGGAAGAGTCCCACTTCACGGATTACTACTTTACCGCCGAGCGCTTTGCCGG GGGGTACTTGCTCCCCGCTCTCCTTTTTTTAGTGGTGATCGCGTTATGCCTGCTCTTTTT TCTGTTCACGTAG
  • Download Fasta

  • Fasta :-

    MELKKALLCCVLLAVKRAVAPTVYFSGLDIKNMTGKYKEIEERHAKQNVNDIFFRELKKS NYQLNSNIIALSTSRHYFNYRHTSNLLTAYKYLKHVGGNLDRNILLMVPFDQACNCRNIV EGTIFNEYEKPPSEDLKKKKMKENLYSHLHIDYKNDNIRDEQIRRVIRHRYDALTPVKNR LYTNGNRERNLFIYMTGHGGVSFFKIQDFNIVSSAEFSLYIQELLIKNIYKYIFVIIDTC QGYSFYDKTLHFLKKKKINNVFLMSSSDKNENSYSLHSSKYLGVSTVDRFTFYFFSYLEN MNRVYAHEPHKNAKAFSLYSILNYLKTQHLISTPTINSSKFSASMFMHSKNILFYDSSGF YVSKDAEGNALEGLGKHRYDASQRTDKTATRSTCLGDLITCGHVKNEIHTHMGNLYSRSS YYSNVEVFFKEESHFTDYYFTAERFAGGYLLPALLFLVVIALCLLFFLFT

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IDSitePeptideScoreMethod
PVX_092055420 SYSRSSYYSN0.995unsp
PVX_092055      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India