PVX_094690 | hypothetical protein, conserved

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No Results
No Results

  • Fasta :-

    >PVX_094690 MNIKNLDDVKYRIHKIKVLNENDKKAKAVLTRAADQVMPIMKKMRFSVELLSEFLPRSPK LLGLNIATKSEIKIRMRKKRGGELFHFNDIMGTLLHELAHIVHSGHDRSFYELLDKLVLE YNQLYTFGKLENQISGGKKTGGTDFRICKGSPKLMAAQAAEMRLLNNFMNKDGEILNISL GSCLTPEQYDNLFKNRKERDDKICSISNDIIVIDPSMDSTSHENGESAETSQNTKNNFKR SNSLQGRNKDVFTLNADRVKEEEQTHVPAQDVCRKSSKIPGGSDCVHVLKVKRDCSGVKR PENENGSTASDNVGIRKGKKRKVIILD
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_094690.fa Sequence name : PVX_094690 Sequence length : 327 VALUES OF COMPUTED PARAMETERS Coef20 : 3.617 CoefTot : -0.259 ChDiff : 14 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.341 0.724 -0.136 0.403 MesoH : -1.218 -0.005 -0.581 0.090 MuHd_075 : 11.383 5.706 0.897 1.151 MuHd_095 : 19.698 11.623 3.613 4.004 MuHd_100 : 21.708 15.876 6.128 4.759 MuHd_105 : 25.206 21.340 8.916 5.731 Hmax_075 : -9.600 6.800 -4.104 2.200 Hmax_095 : -2.975 7.000 -3.106 2.257 Hmax_100 : -6.800 6.100 -3.439 1.940 Hmax_105 : 11.550 21.000 2.647 6.557 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8935 0.1065 DFMC : 0.9375 0.0625
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 327 PVX_094690 MNIKNLDDVKYRIHKIKVLNENDKKAKAVLTRAADQVMPIMKKMRFSVELLSEFLPRSPKLLGLNIATKSEIKIRMRKKR 80 GGELFHFNDIMGTLLHELAHIVHSGHDRSFYELLDKLVLEYNQLYTFGKLENQISGGKKTGGTDFRICKGSPKLMAAQAA 160 EMRLLNNFMNKDGEILNISLGSCLTPEQYDNLFKNRKERDDKICSISNDIIVIDPSMDSTSHENGESAETSQNTKNNFKR 240 SNSLQGRNKDVFTLNADRVKEEEQTHVPAQDVCRKSSKIPGGSDCVHVLKVKRDCSGVKRPENENGSTASDNVGIRKGKK 320 RKVIILD 400 ...............................................................................P 80 ................................................................................ 160 ...............................................................................P 240 ................................................................................ 320 ....... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ PVX_094690 4 ---MNIK|NL 0.065 . PVX_094690 10 KNLDDVK|YR 0.063 . PVX_094690 12 LDDVKYR|IH 0.089 . PVX_094690 15 VKYRIHK|IK 0.103 . PVX_094690 17 YRIHKIK|VL 0.077 . PVX_094690 24 VLNENDK|KA 0.076 . PVX_094690 25 LNENDKK|AK 0.081 . PVX_094690 27 ENDKKAK|AV 0.081 . PVX_094690 32 AKAVLTR|AA 0.209 . PVX_094690 42 QVMPIMK|KM 0.061 . PVX_094690 43 VMPIMKK|MR 0.084 . PVX_094690 45 PIMKKMR|FS 0.125 . PVX_094690 57 LSEFLPR|SP 0.111 . PVX_094690 60 FLPRSPK|LL 0.130 . PVX_094690 69 GLNIATK|SE 0.090 . PVX_094690 73 ATKSEIK|IR 0.056 . PVX_094690 75 KSEIKIR|MR 0.107 . PVX_094690 77 EIKIRMR|KK 0.098 . PVX_094690 78 IKIRMRK|KR 0.327 . PVX_094690 79 KIRMRKK|RG 0.121 . PVX_094690 80 IRMRKKR|GG 0.755 *ProP* PVX_094690 108 VHSGHDR|SF 0.168 . PVX_094690 116 FYELLDK|LV 0.059 . PVX_094690 129 QLYTFGK|LE 0.068 . PVX_094690 138 NQISGGK|KT 0.061 . PVX_094690 139 QISGGKK|TG 0.126 . PVX_094690 146 TGGTDFR|IC 0.095 . PVX_094690 149 TDFRICK|GS 0.131 . PVX_094690 153 ICKGSPK|LM 0.064 . PVX_094690 163 AQAAEMR|LL 0.080 . PVX_094690 171 LNNFMNK|DG 0.081 . PVX_094690 194 QYDNLFK|NR 0.053 . PVX_094690 196 DNLFKNR|KE 0.085 . PVX_094690 197 NLFKNRK|ER 0.088 . PVX_094690 199 FKNRKER|DD 0.359 . PVX_094690 202 RKERDDK|IC 0.161 . PVX_094690 235 ETSQNTK|NN 0.062 . PVX_094690 239 NTKNNFK|RS 0.056 . PVX_094690 240 TKNNFKR|SN 0.581 *ProP* PVX_094690 247 SNSLQGR|NK 0.112 . PVX_094690 249 SLQGRNK|DV 0.098 . PVX_094690 258 FTLNADR|VK 0.076 . PVX_094690 260 LNADRVK|EE 0.066 . PVX_094690 274 PAQDVCR|KS 0.128 . PVX_094690 275 AQDVCRK|SS 0.101 . PVX_094690 278 VCRKSSK|IP 0.076 . PVX_094690 290 DCVHVLK|VK 0.059 . PVX_094690 292 VHVLKVK|RD 0.059 . PVX_094690 293 HVLKVKR|DC 0.256 . PVX_094690 299 RDCSGVK|RP 0.061 . PVX_094690 300 DCSGVKR|PE 0.183 . PVX_094690 316 SDNVGIR|KG 0.079 . PVX_094690 317 DNVGIRK|GK 0.079 . PVX_094690 319 VGIRKGK|KR 0.117 . PVX_094690 320 GIRKGKK|RK 0.096 . PVX_094690 321 IRKGKKR|KV 0.365 . PVX_094690 322 RKGKKRK|VI 0.094 . ____________________________^_________________

  • Fasta :-

    >PVX_094690 AGGTATTAATGGATGAAATATTTACCCGATTAATTTAAAACGTAATTGTAACAAACATCT GCGTGATGAACTTGGCAAATAAGAACATTTGTTCCTGTTTTTGTTTTATTTTGCAAAATT TGAAGAAGCAAAAAGAATGACAAACTGCCTTCACAACGCTTCCCTAAGTCATGAACATTA AAAATTTGGATGATGTAAAATACAGAATTCATAAAATTAAAGTTTTAAACGAAAATGATA AGAAGGCAAAGGCAGTGTTGACCCGGGCCGCCGACCAGGTGATGCCAATTATGAAGAAGA TGCGCTTTTCGGTTGAGTTACTGTCCGAGTTTTTACCTCGGAGCCCAAAATTGCTAGGGC TAAACATAGCGACTAAATCTGAAATTAAGATACGTATGAGGAAAAAAAGGGGAGGGGAGT TATTTCACTTCAACGACATCATGGGGACGCTGCTGCACGAGCTGGCGCACATAGTGCACA GCGGACATGACAGGTCATTTTACGAACTGTTAGACAAGCTAGTATTGGAGTATAATCAAC TGTACACCTTTGGAAAACTGGAAAATCAAATCAGTGGAGGGAAAAAAACAGGAGGAACTG ATTTCCGCATATGTAAGGGCAGCCCCAAATTAATGGCAGCACAGGCAGCTGAAATGAGGC TACTTAATAATTTTATGAATAAAGATGGGGAAATATTAAATATATCCCTTGGAAGTTGCT TAACGCCAGAACAGTATGATAATTTATTTAAAAATCGAAAAGAACGTGATGATAAAATTT GTTCCATTTCGAATGATATCATTGTGATCGACCCGTCGATGGATTCGACTAGCCATGAAA ATGGTGAAAGTGCAGAAACCTCGCAGAACACAAAAAATAATTTTAAACGATCAAATTCGT TGCAGGGAAGGAATAAAGATGTTTTCACTTTGAATGCGGATCGTGTAAAGGAGGAGGAAC AGACACATGTGCCTGCGCAGGATGTGTGTAGGAAATCGTCCAAGATACCAGGAGGCAGCG ACTGCGTGCACGTTTTGAAGGTCAAACGAGATTGCAGCGGTGTGAAACGTCCTGAAAATG AAAATGGCTCGACCGCGTCTGATAACGTGGGTATTAGGAAGGGCAAAAAGAGAAAAGTTA TCATTCTCGATTAG
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  • Fasta :-

    No Results
  • title: Zn binding site
  • coordinates: H96,H100,H106
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_094690276 SVCRKSSKIP0.991unspPVX_094690276 SVCRKSSKIP0.991unspPVX_094690276 SVCRKSSKIP0.991unspPVX_09469047 SKMRFSVELL0.991unspPVX_094690221 SMDSTSHENG0.997unsp
PVX_094690      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India