PVX_095200 | signal peptidase complex subunit 2, putative

No Results
No Results

  • Fasta :-

    >PVX_095200 MPRIQLDDDNRGSIYLVTNLYSEQELKKVAQDYLSERLRDQNFAENIKYSNIRIFLSLLL ISIGSYCTIFVQYKKNPLLMIKLLIAFFIVSVTLFFWEYFFFEDIFMILKTNNGGVAKLF IELDINKSALLLTYKMDKQKHSTSFELRKLFNEDGFLIQCYADAMLKQFLSDHGKLFKLC DDKKQD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_095200.fa Sequence name : PVX_095200 Sequence length : 186 VALUES OF COMPUTED PARAMETERS Coef20 : 3.662 CoefTot : -0.151 ChDiff : 1 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.135 2.635 0.492 0.835 MesoH : 0.514 1.218 -0.120 0.498 MuHd_075 : 12.417 3.233 1.314 1.920 MuHd_095 : 24.768 9.478 4.153 4.910 MuHd_100 : 16.795 4.832 2.576 3.127 MuHd_105 : 6.765 7.438 1.059 0.734 Hmax_075 : -0.350 3.237 -2.773 2.065 Hmax_095 : -1.138 3.762 -2.261 2.130 Hmax_100 : -3.700 2.400 -2.613 2.130 Hmax_105 : -2.567 6.400 -1.711 2.007 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9564 0.0436 DFMC : 0.9691 0.0309
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 186 PVX_095200 MPRIQLDDDNRGSIYLVTNLYSEQELKKVAQDYLSERLRDQNFAENIKYSNIRIFLSLLLISIGSYCTIFVQYKKNPLLM 80 IKLLIAFFIVSVTLFFWEYFFFEDIFMILKTNNGGVAKLFIELDINKSALLLTYKMDKQKHSTSFELRKLFNEDGFLIQC 160 YADAMLKQFLSDHGKLFKLCDDKKQD 240 ................................................................................ 80 ................................................................................ 160 .......................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_095200 3 ----MPR|IQ 0.075 . PVX_095200 11 QLDDDNR|GS 0.076 . PVX_095200 27 YSEQELK|KV 0.069 . PVX_095200 28 SEQELKK|VA 0.119 . PVX_095200 37 QDYLSER|LR 0.083 . PVX_095200 39 YLSERLR|DQ 0.127 . PVX_095200 48 NFAENIK|YS 0.059 . PVX_095200 53 IKYSNIR|IF 0.082 . PVX_095200 74 TIFVQYK|KN 0.058 . PVX_095200 75 IFVQYKK|NP 0.069 . PVX_095200 82 NPLLMIK|LL 0.060 . PVX_095200 110 DIFMILK|TN 0.056 . PVX_095200 118 NNGGVAK|LF 0.065 . PVX_095200 127 IELDINK|SA 0.062 . PVX_095200 135 ALLLTYK|MD 0.061 . PVX_095200 138 LTYKMDK|QK 0.059 . PVX_095200 140 YKMDKQK|HS 0.071 . PVX_095200 148 STSFELR|KL 0.108 . PVX_095200 149 TSFELRK|LF 0.084 . PVX_095200 167 YADAMLK|QF 0.051 . PVX_095200 175 FLSDHGK|LF 0.065 . PVX_095200 178 DHGKLFK|LC 0.064 . PVX_095200 183 FKLCDDK|KQ 0.057 . PVX_095200 184 KLCDDKK|QD 0.093 . ____________________________^_________________

  • Fasta :-

    >PVX_095200 CGCGCTTCTTAACTCCCCTGTGCCTCTTTTACACTACCGCTTGCCCTCTTTGTGCTCGTA TGTTACCCCTCTTGTACTCGTGTGCTACCCCTCTTGTACTCGCGTTTTGCCCCTCTTCGC GCGCCTCTCTAGCTCAGCGGGTAGGCAGACTGGTCAGCAGATTGGCCAAAGCGTGGACGC CCTAATCGCTTCTCTTCACTTCCAATTACTCCAATTACTGCAATCACTCCAATAGCTCTT ATCACTCCTATCACTCCTACCCCTGCTTGGCCTGCTTAACGCTCGCACTCCGCGTGCTCT CTAGTCGCGCCCCTCGAGCAGCCACGCGGCCTCACTTCTGCTAATCGTTCGGTACTGCGA CTGCCCCTCTTTCGCGCAGTCGATCTCGTTTTTCACGTGCGATCTACTCCTTTGGCGTAT CTACTACAAGCCTAAACTCTCATGTAGCGCGTCGGCACAGTGAACCATGCCACGGTGAAT GTACGTTGGTCCAGCGATGACGTGTGGTTAGTCAATCATTCGCGCTGCAGCTTTGTATGT ATGTACTTATATATATATAATACATACATGCGTGGTGTTTTTTTTTTTTTTTTTTTTTTC TCCTCGCCGTGCCACTCCGAAAGGGGCAACTAAAAGATACACGCCTACGCGTAAATCGCT TCACGCATGGTGCGTACCCTTGTCATTCACTGGGGAGAACTAATTGGGGGGAATTTCACT TGCATATAATTCTTCATAATTGCAATTTTATAATTATACCTGTACGGTATATATGCTTGG TGAGTAGGTCTCTCCCCCCCCCTAACTTGGACTTGCTAATATGCTCGTCCCATTTTTCAT GCCATTACGACGCAGGAGAGTGATCCCCTTTTTTTTTTTTTTTTTTTTGAGAACCACCAC TACACCTCCCTGACGTTGCGCGAACTTCGTTGCCACTTCTCCCCTTCCCCCCAACGTGGG ATTGCCCTACCACAAGTGAAGCGTATTTTTTACAAACAGGGGAAACATGCCGAGAATACA GCTGGACGATGATAATAGGGGTAGCATATACCTCGTCACCAACCTGTACAGCGAACAAGA GTTGAAAAAGGTCGCGCAGGACTACCTAAGCGAGAGATTAAGGGACCAAAATTTCGCAGA AAACATTAAGTACTCCAACATCCGAATTTTCCTAAGCTTGCTGCTCATATCGATTGGGTC CTACTGCACCATCTTCGTGCAGTACAAAAAGAATCCGTTGCTTATGATCAAGTTGCTGAT CGCCTTCTTCATCGTGTCGGTAACTCTCTTCTTTTGGGAGTACTTCTTCTTCGAAGACAT CTTCATGATTTTGAAGACGAACAATGGCGGCGTGGCGAAGCTGTTCATCGAGCTGGACAT CAACAAGAGCGCCCTCCTATTAACCTACAAGATGGATAAGCAAAAGCACAGCACGTCGTT TGAGCTCCGCAAGCTGTTCAACGAAGATGGCTTCCTCATCCAGTGTTACGCAGACGCCAT GTTGAAGCAGTTCCTTTCAGATCACGGCAAGCTTTTCAAACTCTGTGATGATAAGAAGCA GGACTAG
  • Download Fasta

  • Fasta :-

    No Results
    No Results
No Results
No Results
No Results
PVX_095200      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India