PVX_096390 | hypothetical protein, conserved

UniProt_ID: A5KC85

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs:
Computed_GO_Functions:
Computed_GO_Process_IDs:
Computed_GO_Processes:
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	PVX_096390	OTHER	0.709269	0.000922	0.289809

No Results

Fasta :-
>PVX_096390 MFHHLRGKNAPHNYLSRCAWGKLLPPGGVPYRSRGPKLRGVTVLESLRRPHSGCSKRGDP LQAARHRADGKGGKAEPFGGRRERGECNGGKDRSIGGDRCRGKSAETSMYYPERNSFPCV TTGIVLGMVGISSFFQLLIYNLKNCEDEWSIQQKVNEILDRLDGYFIIHDFEEDPMERRK RSGLNSVLADLFNIKYLTSPFFANENVLQCAVQLATFFLASRFLERQFGSLQFGALFICG CFLSNLLTHQFLKNIANKMETLNLLSFVLIHPSGCMAFICALCSICFKNCAIWKDIPVHC SILVVPYLLSSFYGLLSLYKIGRSNLGRTHGEVPDEGGAPSQRGNLQTVDAKGHPYEGAP HVGIPTSSSNSSNSSNSSNSSNSSNSSSSRSSGSSHGNDKGQPNGHPSNRPIPSETMETL RNFLIVKACDSVIKRRKKENLFPNKRLQNLKNESLRNINEISNKSKKIFFGLSSSFTDIC GILLAACGPLLFKMLR
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_096390.fa Sequence name : PVX_096390 Sequence length : 496 VALUES OF COMPUTED PARAMETERS Coef20 : 3.701 CoefTot : -2.965 ChDiff : 24 ZoneTo : 58 KR : 12 DE : 1 CleavSite : 59 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.129 2.059 0.538 0.763 MesoH : 0.664 1.155 0.023 0.435 MuHd_075 : 40.261 25.814 10.344 9.378 MuHd_095 : 38.189 17.254 9.763 7.406 MuHd_100 : 31.809 18.582 9.068 6.973 MuHd_105 : 38.911 23.717 10.964 9.324 Hmax_075 : 10.300 19.833 1.212 4.630 Hmax_095 : 8.800 9.900 1.625 3.490 Hmax_100 : 9.400 9.900 1.625 3.790 Hmax_105 : 12.833 14.350 4.062 4.888 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0257 0.9743 DFMC : 0.0519 0.9481 This protein is probably imported in mitochondria. f(Ser) = 0.0862 f(Arg) = 0.1379 CMi = 0.32765 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 496 PVX_096390 MFHHLRGKNAPHNYLSRCAWGKLLPPGGVPYRSRGPKLRGVTVLESLRRPHSGCSKRGDPLQAARHRADGKGGKAEPFGG 80 RRERGECNGGKDRSIGGDRCRGKSAETSMYYPERNSFPCVTTGIVLGMVGISSFFQLLIYNLKNCEDEWSIQQKVNEILD 160 RLDGYFIIHDFEEDPMERRKRSGLNSVLADLFNIKYLTSPFFANENVLQCAVQLATFFLASRFLERQFGSLQFGALFICG 240 CFLSNLLTHQFLKNIANKMETLNLLSFVLIHPSGCMAFICALCSICFKNCAIWKDIPVHCSILVVPYLLSSFYGLLSLYK 320 IGRSNLGRTHGEVPDEGGAPSQRGNLQTVDAKGHPYEGAPHVGIPTSSSNSSNSSNSSNSSNSSNSSSSRSSGSSHGNDK 400 GQPNGHPSNRPIPSETMETLRNFLIVKACDSVIKRRKKENLFPNKRLQNLKNESLRNINEISNKSKKIFFGLSSSFTDIC 480 GILLAACGPLLFKMLR 560 ................................................................................ 80 ................................................................................ 160 ....................P........................................................... 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PVX_096390 6 -MFHHLR|GK 0.086 . PVX_096390 8 FHHLRGK|NA 0.067 . PVX_096390 17 PHNYLSR|CA 0.111 . PVX_096390 22 SRCAWGK|LL 0.076 . PVX_096390 32 PGGVPYR|SR 0.193 . PVX_096390 34 GVPYRSR|GP 0.084 . PVX_096390 37 YRSRGPK|LR 0.177 . PVX_096390 39 SRGPKLR|GV 0.243 . PVX_096390 48 TVLESLR|RP 0.064 . PVX_096390 49 VLESLRR|PH 0.102 . PVX_096390 56 PHSGCSK|RG 0.064 . PVX_096390 57 HSGCSKR|GD 0.209 . PVX_096390 65 DPLQAAR|HR 0.091 . PVX_096390 67 LQAARHR|AD 0.170 . PVX_096390 71 RHRADGK|GG 0.077 . PVX_096390 74 ADGKGGK|AE 0.062 . PVX_096390 81 AEPFGGR|RE 0.070 . PVX_096390 82 EPFGGRR|ER 0.116 . PVX_096390 84 FGGRRER|GE 0.335 . PVX_096390 91 GECNGGK|DR 0.083 . PVX_096390 93 CNGGKDR|SI 0.201 . PVX_096390 99 RSIGGDR|CR 0.101 . PVX_096390 101 IGGDRCR|GK 0.127 . PVX_096390 103 GDRCRGK|SA 0.142 . PVX_096390 114 SMYYPER|NS 0.117 . PVX_096390 143 LLIYNLK|NC 0.061 . PVX_096390 154 EWSIQQK|VN 0.074 . PVX_096390 161 VNEILDR|LD 0.088 . PVX_096390 178 EEDPMER|RK 0.077 . PVX_096390 179 EDPMERR|KR 0.098 . PVX_096390 180 DPMERRK|RS 0.079 . PVX_096390 181 PMERRKR|SG 0.617 *ProP* PVX_096390 195 ADLFNIK|YL 0.060 . PVX_096390 222 TFFLASR|FL 0.108 . PVX_096390 226 ASRFLER|QF 0.115 . PVX_096390 253 LTHQFLK|NI 0.071 . PVX_096390 258 LKNIANK|ME 0.069 . PVX_096390 288 LCSICFK|NC 0.061 . PVX_096390 294 KNCAIWK|DI 0.073 . PVX_096390 320 GLLSLYK|IG 0.057 . PVX_096390 323 SLYKIGR|SN 0.131 . PVX_096390 328 GRSNLGR|TH 0.166 . PVX_096390 343 GGAPSQR|GN 0.102 . PVX_096390 352 LQTVDAK|GH 0.062 . PVX_096390 390 SNSSSSR|SS 0.277 . PVX_096390 400 SSHGNDK|GQ 0.071 . PVX_096390 410 NGHPSNR|PI 0.107 . PVX_096390 421 ETMETLR|NF 0.075 . PVX_096390 427 RNFLIVK|AC 0.064 . PVX_096390 434 ACDSVIK|RR 0.054 . PVX_096390 435 CDSVIKR|RK 0.180 . PVX_096390 436 DSVIKRR|KK 0.162 . PVX_096390 437 SVIKRRK|KE 0.068 . PVX_096390 438 VIKRRKK|EN 0.162 . PVX_096390 445 ENLFPNK|RL 0.058 . PVX_096390 446 NLFPNKR|LQ 0.103 . PVX_096390 451 KRLQNLK|NE 0.058 . PVX_096390 456 LKNESLR|NI 0.104 . PVX_096390 464 INEISNK|SK 0.078 . PVX_096390 466 EISNKSK|KI 0.098 . PVX_096390 467 ISNKSKK|IF 0.126 . PVX_096390 493 CGPLLFK|ML 0.059 . PVX_096390 496 LLFKMLR|-- 0.089 . ____________________________^_________________

Fasta :-
>PVX_096390 ATGTTTCACCATTTGAGGGGGAAAAATGCACCACATAACTACCTGTCGAGGTGCGCCTGG GGGAAGTTGCTCCCTCCTGGGGGGGTCCCCTACCGGAGCCGCGGGCCCAAGCTAAGAGGC GTAACTGTGTTGGAGAGTTTGAGAAGACCCCACAGTGGTTGCAGTAAGAGGGGAGATCCG TTGCAGGCGGCAAGGCATAGAGCGGATGGCAAAGGTGGCAAAGCAGAGCCGTTTGGAGGA AGGCGTGAAAGGGGTGAGTGCAACGGAGGGAAAGACCGCTCCATCGGGGGAGACCGCTGC AGAGGGAAAAGCGCAGAAACGTCCATGTACTACCCAGAGCGAAACTCCTTCCCGTGCGTG ACGACCGGCATCGTTCTAGGCATGGTGGGCATTTCGTCCTTCTTCCAACTTTTAATTTAC AATTTGAAAAATTGCGAAGACGAGTGGAGCATCCAGCAAAAGGTAAACGAAATTCTGGAC CGTCTGGATGGCTACTTTATAATTCACGATTTTGAAGAGGACCCAATGGAAAGACGCAAG AGAAGTGGACTTAACTCTGTACTGGCTGACCTCTTCAACATCAAATATTTGACGTCTCCA TTTTTCGCTAATGAAAATGTCCTACAGTGTGCAGTTCAGCTAGCCACTTTTTTTTTGGCC TCTAGATTTCTCGAAAGACAATTTGGGTCCCTACAGTTTGGCGCCCTATTCATATGCGGC TGCTTCCTTTCCAATCTTCTAACTCATCAGTTTTTAAAAAATATTGCCAACAAAATGGAA ACATTAAATTTGCTCAGCTTTGTTCTCATACACCCTTCTGGGTGTATGGCTTTTATATGT GCCCTCTGCTCGATTTGCTTCAAAAACTGTGCCATCTGGAAGGACATCCCTGTGCACTGC TCCATTTTGGTTGTTCCCTATCTGCTTTCTTCCTTTTACGGCCTCTTATCTTTGTACAAA ATTGGAAGGAGCAACTTGGGAAGGACTCACGGGGAGGTCCCTGATGAAGGAGGCGCCCCC AGTCAGCGGGGCAATCTCCAAACTGTGGACGCGAAGGGCCATCCCTACGAAGGTGCCCCA CATGTGGGTATACCAACCAGCAGCAGCAACAGCAGCAACAGCAGCAACAGCAGCAACAGC AGCAACAGCAGCAACAGCAGCAGTAGTAGAAGCAGCGGTAGTAGCCATGGCAACGACAAA GGACAACCAAATGGCCACCCCAGTAATAGACCCATCCCAAGTGAAACCATGGAAACCCTA AGGAACTTCCTAATCGTGAAAGCCTGTGATTCAGTCATTAAGAGGCGCAAAAAGGAAAAT CTGTTTCCAAACAAAAGGCTGCAAAACCTCAAAAATGAATCGCTAAGAAATATTAACGAA ATTAGCAATAAATCGAAGAAAATATTTTTTGGTTTGTCTTCTTCCTTTACGGACATATGC GGCATCCTGCTCGCAGCTTGCGGGCCCCTCCTTTTTAAGATGCTCAGGTAG
Download Fasta

Fasta :-

MFHHLRGKNAPHNYLSRCAWGKLLPPGGVPYRSRGPKLRGVTVLESLRRPHSGCSKRGDP LQAARHRADGKGGKAEPFGGRRERGECNGGKDRSIGGDRCRGKSAETSMYYPERNSFPCV TTGIVLGMVGISSFFQLLIYNLKNCEDEWSIQQKVNEILDRLDGYFIIHDFEEDPMERRK RSGLNSVLADLFNIKYLTSPFFANENVLQCAVQLATFFLASRFLERQFGSLQFGALFICG CFLSNLLTHQFLKNIANKMETLNLLSFVLIHPSGCMAFICALCSICFKNCAIWKDIPVHC SILVVPYLLSSFYGLLSLYKIGRSNLGRTHGEVPDEGGAPSQRGNLQTVDAKGHPYEGAP HVGIPTSSSNSSNSSNSSNSSNSSNSSSSRSSGSSHGNDKGQPNGHPSNRPIPSETMETL RNFLIVKACDSVIKRRKKENLFPNKRLQNLKNESLRNINEISNKSKKIFFGLSSSFTDIC GILLAACGPLLFKMLR

Rhomboid-like

No Results

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	PVX_096390	S	380	0.621	0.026	PVX_096390	S	381	0.587	0.025	PVX_096390	S	377	0.582	0.026	PVX_096390	S	378	0.579	0.025	PVX_096390	T	366	0.577	0.120	PVX_096390	S	374	0.569	0.026	PVX_096390	S	375	0.557	0.025	PVX_096390	S	372	0.529	0.025	PVX_096390	S	383	0.520	0.026	PVX_096390	S	369	0.507	0.039

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	PVX_096390	S	380	0.621	0.026	PVX_096390	S	381	0.587	0.025	PVX_096390	S	377	0.582	0.026	PVX_096390	S	378	0.579	0.025	PVX_096390	T	366	0.577	0.120	PVX_096390	S	374	0.569	0.026	PVX_096390	S	375	0.557	0.025	PVX_096390	S	372	0.529	0.025	PVX_096390	S	383	0.520	0.026	PVX_096390	S	369	0.507	0.039

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	PVX_096390	389 S	NSSSSRSSG	0.993	unsp	PVX_096390	389 S	NSSSSRSSG	0.993	unsp	PVX_096390	389 S	NSSSSRSSG	0.993	unsp	PVX_096390	392 S	SSRSSGSSH	0.997	unsp	PVX_096390	395 S	SSGSSHGND	0.995	unsp	PVX_096390	52 S	RRPHSGCSK	0.991	unsp	PVX_096390	104 S	CRGKSAETS	0.993	unsp

PVX_096390

PVX_096390 | hypothetical protein, conserved

ID's

UniProt_ID: A5KC85

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs:

Computed_GO_Functions:

Computed_GO_Process_IDs:

Computed_GO_Processes:

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Rhomboid-like

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India