PVX_098665 | signal peptidase complex subunit 3, putative

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  • Fasta :-

    >PVX_098665 MDNVLNRLNVLSYSMALCFFTLCLFNYGTSFYLFDEKEMSTSIKVKSVKRLVYNRHIKGD EAVLSLDLSYDMSKAFNWNLKQLFLYVLVTYETPEKVKNEVIIQDYIITNKKMAKKTHKN FFTKYSLKDYNNGLRNNNINLQVCYKYMPIVGLSRSYEGAKISYKLPAEYFDNLSANYPL YYPDK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_098665.fa Sequence name : PVX_098665 Sequence length : 185 VALUES OF COMPUTED PARAMETERS Coef20 : 4.546 CoefTot : -0.029 ChDiff : 8 ZoneTo : 34 KR : 1 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.812 1.788 0.354 0.589 MesoH : -0.858 0.226 -0.465 0.137 MuHd_075 : 27.070 13.883 6.140 5.189 MuHd_095 : 23.643 15.418 5.359 5.146 MuHd_100 : 26.225 19.147 7.628 4.962 MuHd_105 : 26.909 22.516 8.762 4.750 Hmax_075 : 12.250 15.167 2.191 5.087 Hmax_095 : 17.500 17.500 2.678 5.933 Hmax_100 : 18.700 19.500 4.217 6.060 Hmax_105 : 4.637 13.200 1.626 2.010 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8416 0.1584 DFMC : 0.7128 0.2872
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 185 PVX_098665 MDNVLNRLNVLSYSMALCFFTLCLFNYGTSFYLFDEKEMSTSIKVKSVKRLVYNRHIKGDEAVLSLDLSYDMSKAFNWNL 80 KQLFLYVLVTYETPEKVKNEVIIQDYIITNKKMAKKTHKNFFTKYSLKDYNNGLRNNNINLQVCYKYMPIVGLSRSYEGA 160 KISYKLPAEYFDNLSANYPLYYPDK 240 ................................................................................ 80 ................................................................................ 160 ......................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_098665 7 MDNVLNR|LN 0.086 . PVX_098665 37 FYLFDEK|EM 0.060 . PVX_098665 44 EMSTSIK|VK 0.077 . PVX_098665 46 STSIKVK|SV 0.148 . PVX_098665 49 IKVKSVK|RL 0.065 . PVX_098665 50 KVKSVKR|LV 0.159 . PVX_098665 55 KRLVYNR|HI 0.112 . PVX_098665 58 VYNRHIK|GD 0.197 . PVX_098665 74 LSYDMSK|AF 0.071 . PVX_098665 81 AFNWNLK|QL 0.066 . PVX_098665 96 TYETPEK|VK 0.059 . PVX_098665 98 ETPEKVK|NE 0.059 . PVX_098665 111 DYIITNK|KM 0.056 . PVX_098665 112 YIITNKK|MA 0.103 . PVX_098665 115 TNKKMAK|KT 0.100 . PVX_098665 116 NKKMAKK|TH 0.084 . PVX_098665 119 MAKKTHK|NF 0.070 . PVX_098665 124 HKNFFTK|YS 0.076 . PVX_098665 128 FTKYSLK|DY 0.076 . PVX_098665 135 DYNNGLR|NN 0.081 . PVX_098665 146 NLQVCYK|YM 0.070 . PVX_098665 155 PIVGLSR|SY 0.116 . PVX_098665 161 RSYEGAK|IS 0.064 . PVX_098665 165 GAKISYK|LP 0.062 . PVX_098665 185 PLYYPDK|-- 0.068 . ____________________________^_________________

  • Fasta :-

    >PVX_098665 ATGGACAACGTGCTGAATAGGCTAAACGTCCTTTCCTATTCCATGGCCTTGTGCTTCTTT ACCCTGTGCCTTTTCAACTATGGAACTTCCTTTTATTTATTCGACGAGAAAGAAATGTCG ACGAGTATAAAAGTAAAAAGTGTGAAGAGGCTGGTGTATAACCGGCACATAAAAGGGGAC GAAGCTGTGTTGTCGCTAGACCTATCATATGACATGAGCAAAGCATTTAATTGGAACTTG AAGCAGCTGTTTCTGTATGTGCTAGTAACGTATGAAACGCCAGAGAAGGTAAAAAACGAA GTTATCATACAGGATTACATAATAACCAATAAAAAAATGGCCAAAAAAACCCACAAGAAT TTCTTCACCAAATATTCCCTTAAAGATTATAATAACGGGTTAAGAAATAATAATATTAAT TTACAAGTCTGTTACAAATATATGCCCATTGTTGGTTTGTCCCGATCTTATGAGGGTGCC AAAATTTCGTACAAATTGCCTGCGGAGTATTTTGACAATTTGTCGGCCAATTATCCGTTG TATTACCCGGACAAGTGA
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  • Fasta :-

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IDSitePeptideScoreMethod
PVX_09866547 SIKVKSVKRL0.996unsp
PVX_098665      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India