PVX_099107 | protease, putative

  • Computed_GO_Component_IDs:  GO:0020011      GO:0016020      

  • Computed_GO_Components:  apicoplast      membrane      

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PVX_099107SP0.3912080.5813990.027394CS pos: 18-19. VGC-FN. Pr: 0.6789
No Results

  • Fasta :-

    >PVX_099107 MMLPFFCLGLILQLYVGCFNVKKKITVTYQWGRAANRKEVKSNAFLVRRQLFKFKKFRAY SSDHGEGEPSIDAAEKGANNGATNGATNRAKNTLREFYHRNCSRLRKTLELVKSGLTSIQ DNLMSNSLASQLAISVSFFLLHFYMLSRHFLILFPYQLIPNHSNILMSLDLNNTLFFLMS IFFFKRFKAHFHSFKQRLQLNRFTIKLQENKRKNILSVCFLLIASYVLSGYVSIYTERIL TLCKLFSRPLSDNVVKSLQILTGHFIWVACSIVVFKQLLYPYFLNNESNLNLRHKDSWFF EVIYGYVFSHFVFSVVDLANNFIINRFMGEAEDEMYVDNSIDDIVSGREFVSTLLCIISP CFSAPFFEEFIYRFFVLKSLNLFMHIHYAVTFSSLFFAIHHLNIFNLLPLFFLSFLWSYI YIYTDNILVTMLIHSFWNIYVFLSSLYS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_099107.fa Sequence name : PVX_099107 Sequence length : 448 VALUES OF COMPUTED PARAMETERS Coef20 : 4.028 CoefTot : -1.049 ChDiff : 16 ZoneTo : 62 KR : 13 DE : 1 CleavSite : 61 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.982 2.041 0.455 0.779 MesoH : 1.086 1.231 -0.037 0.564 MuHd_075 : 41.802 19.994 10.090 9.239 MuHd_095 : 36.090 19.798 9.552 8.562 MuHd_100 : 34.826 18.859 8.781 8.304 MuHd_105 : 41.219 23.176 10.842 9.554 Hmax_075 : 7.350 9.450 0.384 3.675 Hmax_095 : -4.400 9.800 -1.671 1.600 Hmax_100 : 4.000 22.900 6.710 3.030 Hmax_105 : 13.300 9.917 1.354 5.087 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0025 0.9975 DFMC : 0.0053 0.9947 This protein is probably imported in mitochondria. f(Ser) = 0.0484 f(Arg) = 0.0806 CMi = 0.26455 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 448 PVX_099107 MMLPFFCLGLILQLYVGCFNVKKKITVTYQWGRAANRKEVKSNAFLVRRQLFKFKKFRAYSSDHGEGEPSIDAAEKGANN 80 GATNGATNRAKNTLREFYHRNCSRLRKTLELVKSGLTSIQDNLMSNSLASQLAISVSFFLLHFYMLSRHFLILFPYQLIP 160 NHSNILMSLDLNNTLFFLMSIFFFKRFKAHFHSFKQRLQLNRFTIKLQENKRKNILSVCFLLIASYVLSGYVSIYTERIL 240 TLCKLFSRPLSDNVVKSLQILTGHFIWVACSIVVFKQLLYPYFLNNESNLNLRHKDSWFFEVIYGYVFSHFVFSVVDLAN 320 NFIINRFMGEAEDEMYVDNSIDDIVSGREFVSTLLCIISPCFSAPFFEEFIYRFFVLKSLNLFMHIHYAVTFSSLFFAIH 400 HLNIFNLLPLFFLSFLWSYIYIYTDNILVTMLIHSFWNIYVFLSSLYS 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_099107 22 VGCFNVK|KK 0.063 . PVX_099107 23 GCFNVKK|KI 0.100 . PVX_099107 24 CFNVKKK|IT 0.155 . PVX_099107 33 VTYQWGR|AA 0.109 . PVX_099107 37 WGRAANR|KE 0.075 . PVX_099107 38 GRAANRK|EV 0.136 . PVX_099107 41 ANRKEVK|SN 0.078 . PVX_099107 48 SNAFLVR|RQ 0.089 . PVX_099107 49 NAFLVRR|QL 0.129 . PVX_099107 53 VRRQLFK|FK 0.065 . PVX_099107 55 RQLFKFK|KF 0.066 . PVX_099107 56 QLFKFKK|FR 0.101 . PVX_099107 58 FKFKKFR|AY 0.111 . PVX_099107 76 SIDAAEK|GA 0.078 . PVX_099107 89 TNGATNR|AK 0.096 . PVX_099107 91 GATNRAK|NT 0.068 . PVX_099107 95 RAKNTLR|EF 0.083 . PVX_099107 100 LREFYHR|NC 0.119 . PVX_099107 104 YHRNCSR|LR 0.081 . PVX_099107 106 RNCSRLR|KT 0.082 . PVX_099107 107 NCSRLRK|TL 0.271 . PVX_099107 113 KTLELVK|SG 0.061 . PVX_099107 148 HFYMLSR|HF 0.081 . PVX_099107 185 MSIFFFK|RF 0.076 . PVX_099107 186 SIFFFKR|FK 0.165 . PVX_099107 188 FFFKRFK|AH 0.066 . PVX_099107 195 AHFHSFK|QR 0.064 . PVX_099107 197 FHSFKQR|LQ 0.103 . PVX_099107 202 QRLQLNR|FT 0.118 . PVX_099107 206 LNRFTIK|LQ 0.070 . PVX_099107 211 IKLQENK|RK 0.054 . PVX_099107 212 KLQENKR|KN 0.127 . PVX_099107 213 LQENKRK|NI 0.093 . PVX_099107 238 VSIYTER|IL 0.074 . PVX_099107 244 RILTLCK|LF 0.058 . PVX_099107 248 LCKLFSR|PL 0.093 . PVX_099107 256 LSDNVVK|SL 0.088 . PVX_099107 276 CSIVVFK|QL 0.059 . PVX_099107 293 ESNLNLR|HK 0.095 . PVX_099107 295 NLNLRHK|DS 0.080 . PVX_099107 326 NNFIINR|FM 0.126 . PVX_099107 348 DDIVSGR|EF 0.080 . PVX_099107 373 FEEFIYR|FF 0.075 . PVX_099107 378 YRFFVLK|SL 0.085 . ____________________________^_________________

  • Fasta :-

    >PVX_099107 ATGATGCTTCCTTTTTTTTGCCTTGGCCTAATTCTGCAGTTGTACGTCGGGTGCTTCAAC GTGAAAAAAAAGATAACGGTGACATACCAGTGGGGAAGAGCAGCGAACAGGAAGGAAGTT AAGTCGAACGCATTTCTAGTGAGGAGGCAACTCTTTAAATTTAAAAAATTTCGAGCCTAT TCATCAGACCATGGGGAGGGAGAGCCTTCCATCGATGCAGCAGAGAAGGGGGCGAATAAT GGAGCAACTAATGGGGCAACTAATCGGGCAAAGAACACCCTGCGCGAGTTTTACCATCGG AATTGCAGCCGGTTGAGGAAGACACTCGAATTAGTGAAAAGTGGTCTTACCTCCATTCAG GATAACTTAATGTCAAATTCGCTAGCTAGCCAGCTAGCCATTTCTGTGTCGTTTTTTCTT CTCCACTTTTATATGCTCTCTCGCCACTTCCTCATTTTATTCCCCTACCAGTTAATTCCA AACCATTCCAACATTTTGATGAGCCTGGACTTGAACAATACGCTCTTTTTCTTAATGTCC ATTTTTTTTTTCAAACGTTTCAAGGCCCACTTTCACAGCTTCAAGCAGAGGCTGCAGTTG AACCGGTTCACCATCAAGCTACAGGAGAATAAGCGGAAAAACATCCTCTCCGTCTGCTTC CTCTTGATTGCGTCCTACGTTTTATCGGGATATGTGTCCATATACACGGAGCGCATCTTG ACGCTCTGTAAACTGTTCAGTCGGCCCCTCTCCGATAACGTGGTGAAGTCGCTACAGATC CTGACCGGGCACTTCATATGGGTAGCGTGCAGCATCGTCGTGTTTAAGCAGTTGCTTTAC CCCTACTTCCTAAACAATGAAAGCAATTTGAATTTGCGCCACAAGGACAGCTGGTTCTTT GAGGTAATCTATGGGTACGTCTTTTCCCACTTCGTATTCAGCGTTGTGGATTTGGCGAAC AATTTTATAATAAACCGTTTCATGGGGGAGGCGGAGGATGAAATGTACGTGGACAACAGC ATAGACGACATTGTTAGCGGAAGAGAGTTTGTTTCAACTCTGTTGTGCATTATTAGTCCC TGTTTTAGTGCGCCTTTTTTTGAGGAATTTATTTATCGTTTTTTTGTGCTGAAGAGTTTG AATTTGTTCATGCATATACATTACGCCGTTACGTTTTCTTCCCTTTTTTTCGCAATTCAC CATTTGAACATCTTTAACTTGCTTCCCTTGTTTTTCCTGTCCTTCTTATGGTCCTACATT TACATATACACGGACAACATTCTCGTCACTATGCTTATTCACTCGTTCTGGAACATTTAC GTTTTTTTGTCCTCCCTCTACAGCTAG
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  • Fasta :-

    MMLPFFCLGLILQLYVGCFNVKKKITVTYQWGRAANRKEVKSNAFLVRRQLFKFKKFRAY SSDHGEGEPSIDAAEKGANNGATNGATNRAKNTLREFYHRNCSRLRKTLELVKSGLTSIQ DNLMSNSLASQLAISVSFFLLHFYMLSRHFLILFPYQLIPNHSNILMSLDLNNTLFFLMS IFFFKRFKAHFHSFKQRLQLNRFTIKLQENKRKNILSVCFLLIASYVLSGYVSIYTERIL TLCKLFSRPLSDNVVKSLQILTGHFIWVACSIVVFKQLLYPYFLNNESNLNLRHKDSWFF EVIYGYVFSHFVFSVVDLANNFIINRFMGEAEDEMYVDNSIDDIVSGREFVSTLLCIISP CFSAPFFEEFIYRFFVLKSLNLFMHIHYAVTFSSLFFAIHHLNIFNLLPLFFLSFLWSYI YIYTDNILVTMLIHSFWNIYVFLSSLYS

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_099107340 SYVDNSIDDI0.991unspPVX_099107340 SYVDNSIDDI0.991unspPVX_099107340 SYVDNSIDDI0.991unspPVX_099107346 SDDIVSGREF0.991unspPVX_09910793 TRAKNTLREF0.991unspPVX_099107336 YEDEMYVDNS0.991unsp
PVX_099107      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India