PVX_099565 | OTU-like cysteine protease, putative

UniProt_ID: A5K6U5

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	_ID	Prediction	OTHER	SP	mTP	CS_Position
	PVX_099565	OTHER	0.999505	0.000025	0.000469

No Results

Fasta :-
>PVX_099565 MASRLRVSESLERDEQMEAKLSTSMNIKSLAHVLTDIQKLKRTEEMKRYSTFDRRISFLK RNSKIKRANYKSGRKILETRLSAVDCELVKIPGDGNCLFRSISCNLFNQQKYHMYVRRKC VEHMLHFQEEFSIYFEEGTFHEYAKKMSQNGYWGDELCIKATADAFDCVIYIITSTEDNW HLKYESKHRTEGEHKKCVFLAYTSPTHYDSFRLTRS
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_099565.fa Sequence name : PVX_099565 Sequence length : 216 VALUES OF COMPUTED PARAMETERS Coef20 : 4.137 CoefTot : 0.757 ChDiff : 8 ZoneTo : 8 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.212 1.547 0.117 0.491 MesoH : -1.440 -0.277 -0.647 0.065 MuHd_075 : 31.081 16.742 6.517 5.689 MuHd_095 : 4.039 2.482 1.689 1.516 MuHd_100 : 4.106 4.614 1.808 2.442 MuHd_105 : 11.878 10.041 3.345 4.157 Hmax_075 : -1.300 3.900 -2.628 1.690 Hmax_095 : -18.287 -2.888 -5.356 -0.540 Hmax_100 : -7.400 1.300 -3.503 0.840 Hmax_105 : -11.500 0.300 -3.810 -0.040 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9354 0.0646 DFMC : 0.9579 0.0421

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 216 PVX_099565 MASRLRVSESLERDEQMEAKLSTSMNIKSLAHVLTDIQKLKRTEEMKRYSTFDRRISFLKRNSKIKRANYKSGRKILETR 80 LSAVDCELVKIPGDGNCLFRSISCNLFNQQKYHMYVRRKCVEHMLHFQEEFSIYFEEGTFHEYAKKMSQNGYWGDELCIK 160 ATADAFDCVIYIITSTEDNWHLKYESKHRTEGEHKKCVFLAYTSPTHYDSFRLTRS 240 ................................................................................ 80 ................................................................................ 160 ........................................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_099565 4 ---MASR|LR 0.062 . PVX_099565 6 -MASRLR|VS 0.085 . PVX_099565 13 VSESLER|DE 0.073 . PVX_099565 20 DEQMEAK|LS 0.064 . PVX_099565 28 STSMNIK|SL 0.113 . PVX_099565 39 VLTDIQK|LK 0.060 . PVX_099565 41 TDIQKLK|RT 0.075 . PVX_099565 42 DIQKLKR|TE 0.162 . PVX_099565 47 KRTEEMK|RY 0.068 . PVX_099565 48 RTEEMKR|YS 0.154 . PVX_099565 54 RYSTFDR|RI 0.112 . PVX_099565 55 YSTFDRR|IS 0.114 . PVX_099565 60 RRISFLK|RN 0.073 . PVX_099565 61 RISFLKR|NS 0.241 . PVX_099565 64 FLKRNSK|IK 0.115 . PVX_099565 66 KRNSKIK|RA 0.079 . PVX_099565 67 RNSKIKR|AN 0.406 . PVX_099565 71 IKRANYK|SG 0.114 . PVX_099565 74 ANYKSGR|KI 0.094 . PVX_099565 75 NYKSGRK|IL 0.075 . PVX_099565 80 RKILETR|LS 0.074 . PVX_099565 90 VDCELVK|IP 0.065 . PVX_099565 100 DGNCLFR|SI 0.211 . PVX_099565 111 NLFNQQK|YH 0.065 . PVX_099565 117 KYHMYVR|RK 0.081 . PVX_099565 118 YHMYVRR|KC 0.152 . PVX_099565 119 HMYVRRK|CV 0.180 . PVX_099565 145 TFHEYAK|KM 0.087 . PVX_099565 146 FHEYAKK|MS 0.097 . PVX_099565 160 GDELCIK|AT 0.080 . PVX_099565 183 EDNWHLK|YE 0.084 . PVX_099565 187 HLKYESK|HR 0.073 . PVX_099565 189 KYESKHR|TE 0.097 . PVX_099565 195 RTEGEHK|KC 0.054 . PVX_099565 196 TEGEHKK|CV 0.185 . PVX_099565 212 THYDSFR|LT 0.102 . PVX_099565 215 DSFRLTR|S- 0.405 . ____________________________^_________________

Fasta :-
>PVX_099565 ATGGCGAGCCGCCTGCGGGTCTCCGAGAGCCTCGAGCGAGACGAGCAAATGGAAGCAAAG CTGAGCACGAGCATGAACATAAAAAGTTTAGCTCACGTGTTGACAGACATACAGAAGCTA AAACGGACAGAAGAAATGAAGCGATACAGCACATTCGACAGAAGAATTTCATTTTTAAAA AGAAACAGCAAAATCAAAAGAGCCAATTACAAATCTGGAAGAAAAATTTTAGAAACAAGA CTCTCAGCAGTCGACTGCGAATTGGTAAAAATTCCAGGAGATGGCAACTGTCTCTTTCGA TCAATTTCTTGCAATTTATTTAACCAGCAAAAATATCATATGTATGTACGGAGGAAGTGT GTGGAGCACATGCTGCATTTCCAGGAGGAGTTTTCCATTTATTTTGAGGAGGGCACTTTT CACGAGTATGCAAAAAAGATGTCTCAGAATGGCTACTGGGGGGATGAGCTCTGCATCAAG GCCACGGCAGATGCCTTCGACTGCGTTATTTATATTATCACGTCCACTGAGGATAACTGG CATTTGAAATATGAGTCCAAGCATCGAACGGAGGGGGAGCACAAGAAGTGCGTTTTTCTC GCCTACACCAGCCCCACGCACTACGACTCATTTAGGCTCACTCGGTCGTGA
Download Fasta

Fasta :-

MASRLRVSESLERDEQMEAKLSTSMNIKSLAHVLTDIQKLKRTEEMKRYSTFDRRISFLK RNSKIKRANYKSGRKILETRLSAVDCELVKIPGDGNCLFRSISCNLFNQQKYHMYVRRKC VEHMLHFQEEFSIYFEEGTFHEYAKKMSQNGYWGDELCIKATADAFDCVIYIITSTEDNW HLKYESKHRTEGEHKKCVFLAYTSPTHYDSFRLTRS

Ubiquitin thiolesterase protein OTUB2 (Otubain-2)

No Results

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	PVX_099565	T	214	0.541	0.047	PVX_099565	S	216	0.513	0.017

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	PVX_099565	T	214	0.541	0.047	PVX_099565	S	216	0.513	0.017

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	PVX_099565	50 S	MKRYSTFDR	0.997	unsp	PVX_099565	50 S	MKRYSTFDR	0.997	unsp	PVX_099565	50 S	MKRYSTFDR	0.997	unsp	PVX_099565	82 S	ETRLSAVDC	0.991	unsp	PVX_099565	175 S	YIITSTEDN	0.993	unsp	PVX_099565	8 S	RLRVSESLE	0.99	unsp	PVX_099565	10 S	RVSESLERD	0.99	unsp

PVX_099565

PVX_099565 | OTU-like cysteine protease, putative

ID's

UniProt_ID: A5K6U5

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs:

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Curated_GO_Component_IDs:

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Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Ubiquitin thiolesterase protein OTUB2 (Otubain-2)

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India