PVX_100935 | ATP-dependent zinc metalloprotease FTSH 1, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_100935OTHER0.9997200.0000070.000272
No Results

  • Fasta :-

    >PVX_100935 MFKHYENAVKRIMNAKYENESLASTGSEKNGDEENSALLQNNEATGMNKKKSKKTNNDNR KYKYYENFFNKKRNKKWNYFMIFFLGICFGFAIWPFFMTIITYKLFYKDNFNSSNFNTSN TSASLKPYGNDRSKKGENGKVSVKDQSQKNSSPHFRPIRFEEIAGIDESKLELLEVVDFI RNREKYQEMGARMPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEIYVGQGAK RIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGAGQREHDQTLNQLLVEMDGFSNSI HIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDVNGRKRILEIYIKKIKSDLKAEDIDK IARLTPGFSGADLENVVNEATILATRNKKSVVTIGELFEARDKVSMGPERKSLRQSDHQR RITAYHEAGHAIVAYFLQPKTDPIHKATIISRGNALGYVEQIPVDDRHNYFKSQMEAKLA VCMGGRTAEEIVFGKSETSSGASSDISRATEIAYKMVTEWGMSDKLGPLNYKKRMGDGYS SNRLSAQTISTIEVEVKALVEKGKSLSEEILRRHRKELDNLAFALLDRETLSGEEIKKII DPNNTRDYSGKVPVLSKGSKSDGAASGPENEKREGNSTRGGGGSANGSQPNESRSNEGLP NEGLPNVGLPNVGLPNDRQEVKQADKGTPAEELKRASSDHVLKKKGKRGEREKHGHAPTT DNGKIEIVRKSAKNAVKKIRKKYAKDPNVKNKKILKVVNEHKPYDADRKAAGGNFQNEHG RNGKNGLNGANDPNGPNDPLGKLDKRSYPKGPSPDGGNNNSVVKNMSEVLSKEFAPPYEQ NGDNESPDFVKAKELTLNNFKEAVDTSHIKNVGEMKKFNIFEHNLGKLFLFDIFGS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_100935.fa Sequence name : PVX_100935 Sequence length : 896 VALUES OF COMPUTED PARAMETERS Coef20 : 3.350 CoefTot : -0.509 ChDiff : 29 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.647 2.176 0.431 0.938 MesoH : -0.537 0.332 -0.336 0.218 MuHd_075 : 14.204 5.662 2.594 3.184 MuHd_095 : 42.842 24.619 11.526 8.570 MuHd_100 : 41.163 27.115 11.994 8.660 MuHd_105 : 33.011 25.633 10.837 7.878 Hmax_075 : -2.500 2.300 -3.569 1.840 Hmax_095 : 5.250 7.700 -1.205 3.500 Hmax_100 : 6.700 10.100 -0.860 3.740 Hmax_105 : 15.300 15.700 2.403 5.840 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7999 0.2001 DFMC : 0.9092 0.0908
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 896 PVX_100935 MFKHYENAVKRIMNAKYENESLASTGSEKNGDEENSALLQNNEATGMNKKKSKKTNNDNRKYKYYENFFNKKRNKKWNYF 80 MIFFLGICFGFAIWPFFMTIITYKLFYKDNFNSSNFNTSNTSASLKPYGNDRSKKGENGKVSVKDQSQKNSSPHFRPIRF 160 EEIAGIDESKLELLEVVDFIRNREKYQEMGARMPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEIYVGQGAK 240 RIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGAGQREHDQTLNQLLVEMDGFSNSIHIMVIGATNRIDTLDSALLR 320 PGRFDRIVYVPLPDVNGRKRILEIYIKKIKSDLKAEDIDKIARLTPGFSGADLENVVNEATILATRNKKSVVTIGELFEA 400 RDKVSMGPERKSLRQSDHQRRITAYHEAGHAIVAYFLQPKTDPIHKATIISRGNALGYVEQIPVDDRHNYFKSQMEAKLA 480 VCMGGRTAEEIVFGKSETSSGASSDISRATEIAYKMVTEWGMSDKLGPLNYKKRMGDGYSSNRLSAQTISTIEVEVKALV 560 EKGKSLSEEILRRHRKELDNLAFALLDRETLSGEEIKKIIDPNNTRDYSGKVPVLSKGSKSDGAASGPENEKREGNSTRG 640 GGGSANGSQPNESRSNEGLPNEGLPNVGLPNVGLPNDRQEVKQADKGTPAEELKRASSDHVLKKKGKRGEREKHGHAPTT 720 DNGKIEIVRKSAKNAVKKIRKKYAKDPNVKNKKILKVVNEHKPYDADRKAAGGNFQNEHGRNGKNGLNGANDPNGPNDPL 800 GKLDKRSYPKGPSPDGGNNNSVVKNMSEVLSKEFAPPYEQNGDNESPDFVKAKELTLNNFKEAVDTSHIKNVGEMKKFNI 880 FEHNLGKLFLFDIFGS 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ....................................................................P........... 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................ 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PVX_100935 3 ----MFK|HY 0.072 . PVX_100935 10 HYENAVK|RI 0.061 . PVX_100935 11 YENAVKR|IM 0.211 . PVX_100935 16 KRIMNAK|YE 0.088 . PVX_100935 29 ASTGSEK|NG 0.061 . PVX_100935 49 EATGMNK|KK 0.061 . PVX_100935 50 ATGMNKK|KS 0.085 . PVX_100935 51 TGMNKKK|SK 0.232 . PVX_100935 53 MNKKKSK|KT 0.071 . PVX_100935 54 NKKKSKK|TN 0.120 . PVX_100935 60 KTNNDNR|KY 0.107 . PVX_100935 61 TNNDNRK|YK 0.105 . PVX_100935 63 NDNRKYK|YY 0.258 . PVX_100935 71 YENFFNK|KR 0.065 . PVX_100935 72 ENFFNKK|RN 0.080 . PVX_100935 73 NFFNKKR|NK 0.167 . PVX_100935 75 FNKKRNK|KW 0.064 . PVX_100935 76 NKKRNKK|WN 0.269 . PVX_100935 104 MTIITYK|LF 0.063 . PVX_100935 108 TYKLFYK|DN 0.071 . PVX_100935 126 NTSASLK|PY 0.074 . PVX_100935 132 KPYGNDR|SK 0.129 . PVX_100935 134 YGNDRSK|KG 0.068 . PVX_100935 135 GNDRSKK|GE 0.381 . PVX_100935 140 KKGENGK|VS 0.063 . PVX_100935 144 NGKVSVK|DQ 0.079 . PVX_100935 149 VKDQSQK|NS 0.070 . PVX_100935 156 NSSPHFR|PI 0.176 . PVX_100935 159 PHFRPIR|FE 0.283 . PVX_100935 170 AGIDESK|LE 0.056 . PVX_100935 181 EVVDFIR|NR 0.095 . PVX_100935 183 VDFIRNR|EK 0.090 . PVX_100935 185 FIRNREK|YQ 0.080 . PVX_100935 192 YQEMGAR|MP 0.099 . PVX_100935 195 MGARMPK|GV 0.226 . PVX_100935 207 GPPGSGK|TM 0.056 . PVX_100935 212 GKTMLAR|AV 0.144 . PVX_100935 240 YVGQGAK|RI 0.065 . PVX_100935 241 VGQGAKR|IR 0.110 . PVX_100935 243 QGAKRIR|QL 0.122 . PVX_100935 250 QLFAHAR|SV 0.260 . PVX_100935 268 IDAIGGK|RS 0.064 . PVX_100935 269 DAIGGKR|SS 0.284 . PVX_100935 280 VNGAGQR|EH 0.097 . PVX_100935 310 VIGATNR|ID 0.065 . PVX_100935 320 LDSALLR|PG 0.076 . PVX_100935 323 ALLRPGR|FD 0.201 . PVX_100935 326 RPGRFDR|IV 0.496 . PVX_100935 338 LPDVNGR|KR 0.077 . PVX_100935 339 PDVNGRK|RI 0.069 . PVX_100935 340 DVNGRKR|IL 0.211 . PVX_100935 347 ILEIYIK|KI 0.060 . PVX_100935 348 LEIYIKK|IK 0.088 . PVX_100935 350 IYIKKIK|SD 0.084 . PVX_100935 354 KIKSDLK|AE 0.058 . PVX_100935 360 KAEDIDK|IA 0.060 . PVX_100935 363 DIDKIAR|LT 0.071 . PVX_100935 386 ATILATR|NK 0.070 . PVX_100935 388 ILATRNK|KS 0.061 . PVX_100935 389 LATRNKK|SV 0.630 *ProP* PVX_100935 401 GELFEAR|DK 0.097 . PVX_100935 403 LFEARDK|VS 0.056 . PVX_100935 410 VSMGPER|KS 0.080 . PVX_100935 411 SMGPERK|SL 0.185 . PVX_100935 414 PERKSLR|QS 0.140 . PVX_100935 420 RQSDHQR|RI 0.131 . PVX_100935 421 QSDHQRR|IT 0.172 . PVX_100935 440 AYFLQPK|TD 0.059 . PVX_100935 446 KTDPIHK|AT 0.066 . PVX_100935 452 KATIISR|GN 0.083 . PVX_100935 467 QIPVDDR|HN 0.077 . PVX_100935 472 DRHNYFK|SQ 0.101 . PVX_100935 478 KSQMEAK|LA 0.077 . PVX_100935 486 AVCMGGR|TA 0.105 . PVX_100935 495 EEIVFGK|SE 0.082 . PVX_100935 508 ASSDISR|AT 0.164 . PVX_100935 515 ATEIAYK|MV 0.076 . PVX_100935 525 EWGMSDK|LG 0.056 . PVX_100935 532 LGPLNYK|KR 0.056 . PVX_100935 533 GPLNYKK|RM 0.117 . PVX_100935 534 PLNYKKR|MG 0.228 . PVX_100935 543 DGYSSNR|LS 0.079 . PVX_100935 557 TIEVEVK|AL 0.073 . PVX_100935 562 VKALVEK|GK 0.075 . PVX_100935 564 ALVEKGK|SL 0.112 . PVX_100935 572 LSEEILR|RH 0.081 . PVX_100935 573 SEEILRR|HR 0.099 . PVX_100935 575 EILRRHR|KE 0.129 . PVX_100935 576 ILRRHRK|EL 0.351 . PVX_100935 588 AFALLDR|ET 0.086 . PVX_100935 597 LSGEEIK|KI 0.072 . PVX_100935 598 SGEEIKK|II 0.102 . PVX_100935 606 IDPNNTR|DY 0.112 . PVX_100935 611 TRDYSGK|VP 0.065 . PVX_100935 617 KVPVLSK|GS 0.059 . PVX_100935 620 VLSKGSK|SD 0.100 . PVX_100935 632 SGPENEK|RE 0.061 . PVX_100935 633 GPENEKR|EG 0.179 . PVX_100935 639 REGNSTR|GG 0.158 . PVX_100935 654 SQPNESR|SN 0.150 . PVX_100935 678 VGLPNDR|QE 0.068 . PVX_100935 682 NDRQEVK|QA 0.098 . PVX_100935 686 EVKQADK|GT 0.064 . PVX_100935 694 TPAEELK|RA 0.069 . PVX_100935 695 PAEELKR|AS 0.157 . PVX_100935 703 SSDHVLK|KK 0.071 . PVX_100935 704 SDHVLKK|KG 0.146 . PVX_100935 705 DHVLKKK|GK 0.113 . PVX_100935 707 VLKKKGK|RG 0.072 . PVX_100935 708 LKKKGKR|GE 0.200 . PVX_100935 711 KGKRGER|EK 0.254 . PVX_100935 713 KRGEREK|HG 0.070 . PVX_100935 724 PTTDNGK|IE 0.054 . PVX_100935 729 GKIEIVR|KS 0.075 . PVX_100935 730 KIEIVRK|SA 0.141 . PVX_100935 733 IVRKSAK|NA 0.084 . PVX_100935 737 SAKNAVK|KI 0.067 . PVX_100935 738 AKNAVKK|IR 0.114 . PVX_100935 740 NAVKKIR|KK 0.116 . PVX_100935 741 AVKKIRK|KY 0.074 . PVX_100935 742 VKKIRKK|YA 0.114 . PVX_100935 745 IRKKYAK|DP 0.087 . PVX_100935 750 AKDPNVK|NK 0.054 . PVX_100935 752 DPNVKNK|KI 0.100 . PVX_100935 753 PNVKNKK|IL 0.103 . PVX_100935 756 KNKKILK|VV 0.072 . PVX_100935 762 KVVNEHK|PY 0.070 . PVX_100935 768 KPYDADR|KA 0.141 . PVX_100935 769 PYDADRK|AA 0.114 . PVX_100935 781 FQNEHGR|NG 0.113 . PVX_100935 784 EHGRNGK|NG 0.104 . PVX_100935 802 PNDPLGK|LD 0.058 . PVX_100935 805 PLGKLDK|RS 0.069 . PVX_100935 806 LGKLDKR|SY 0.241 . PVX_100935 810 DKRSYPK|GP 0.072 . PVX_100935 824 NNNSVVK|NM 0.075 . PVX_100935 832 MSEVLSK|EF 0.062 . PVX_100935 851 ESPDFVK|AK 0.066 . PVX_100935 853 PDFVKAK|EL 0.074 . PVX_100935 861 LTLNNFK|EA 0.057 . PVX_100935 870 VDTSHIK|NV 0.078 . PVX_100935 876 KNVGEMK|KF 0.072 . PVX_100935 877 NVGEMKK|FN 0.097 . PVX_100935 887 FEHNLGK|LF 0.059 . ____________________________^_________________

  • Fasta :-

    >PVX_100935 GAAGAGAGAAAAAAAAATAAAGCTTCGCAAAGCATGACATTTTTGTATGGCACAATTTTG ACAAGGGCGTAAGCGATACAAGCAGCACAAGCGGATGGCCGCAAAATAATGGCAGCATTT TTGAAGCTCCCCAGCCGTACATCCGAGTGAAAAACCAAATGGTACCAGCGTTCTTGCACG CATGAATGCAGGGCCACCCCTTTTTGATGGGAATAAGAGTGAACATCCTGAGCTCCTCGT TTGTTACTTCCCCCAGGGCGCGTCCCCTCTGTGCAGACCAAACACATGTTTAAGCATTAC GAAAACGCGGTGAAGAGAATTATGAATGCCAAGTATGAAAATGAAAGCCTCGCGTCAACA GGGTCAGAGAAAAATGGCGATGAGGAAAATTCTGCATTGCTACAGAACAACGAGGCGACG GGAATGAACAAGAAGAAATCCAAAAAAACAAATAACGATAATAGGAAGTACAAATATTAT GAAAACTTCTTTAACAAAAAGAGAAATAAAAAATGGAATTATTTTATGATTTTTTTTCTG GGCATATGTTTCGGCTTTGCCATTTGGCCATTCTTCATGACCATAATCACGTATAAATTA TTTTACAAGGACAATTTTAACAGCTCCAATTTTAACACCAGCAACACGTCAGCGTCTTTG AAGCCTTACGGAAATGACAGAAGTAAGAAAGGGGAAAATGGCAAGGTGTCCGTAAAAGAT CAGTCCCAGAAAAATTCCTCTCCCCATTTTAGACCCATCCGATTTGAAGAAATCGCCGGA ATTGATGAATCAAAATTGGAACTCCTCGAAGTTGTTGACTTTATAAGGAACAGAGAAAAG TACCAAGAAATGGGCGCAAGAATGCCTAAGGGGGTTCTCCTCGTTGGCCCTCCAGGCTCA GGCAAAACTATGCTAGCTAGGGCAGTTGCCACAGAAGCAAATGTCCCATATATTTATACC TCCGGCCCAGAGTTCATCGAGATATATGTAGGCCAAGGGGCGAAGCGAATAAGACAGTTA TTTGCTCACGCAAGGTCAGTTGCTCCATCGATCGTTTTTATTGACGAAATTGATGCCATA GGAGGGAAGAGAAGTTCCGGTTCTGTGAATGGCGCTGGGCAGAGAGAGCATGACCAAACG CTTAACCAGTTGTTAGTCGAAATGGATGGGTTCAGCAACAGCATCCATATTATGGTAATA GGTGCAACCAATAGGATAGATACTCTAGATAGTGCCCTACTACGGCCTGGCAGATTCGAT CGAATCGTTTATGTCCCCCTACCGGATGTTAATGGGAGGAAAAGGATCCTAGAAATTTAT ATCAAAAAAATTAAAAGCGATTTAAAGGCAGAAGATATTGACAAGATAGCCAGATTGACT CCTGGTTTTTCAGGTGCCGACTTAGAAAATGTGGTAAATGAAGCAACAATCCTTGCCACT AGAAATAAAAAAAGTGTAGTCACCATTGGGGAGCTGTTCGAAGCTAGGGATAAAGTCTCC ATGGGCCCAGAGAGAAAATCTCTAAGACAGTCCGACCATCAGAGAAGAATTACTGCCTAT CATGAAGCGGGGCATGCAATCGTGGCGTATTTTCTTCAACCCAAAACGGACCCAATACAT AAGGCTACCATTATCTCAAGAGGAAACGCCCTTGGGTACGTAGAACAAATCCCCGTGGAT GATAGGCACAACTATTTTAAAAGCCAAATGGAAGCAAAACTAGCCGTTTGTATGGGTGGA AGAACCGCGGAAGAAATCGTTTTTGGAAAATCTGAAACGAGCAGTGGTGCTTCTAGTGAT ATTTCTAGAGCCACCGAAATTGCCTACAAAATGGTAACCGAGTGGGGAATGTCAGACAAG CTGGGCCCACTGAATTATAAGAAAAGAATGGGAGACGGGTATTCCTCAAACCGATTATCA GCTCAAACCATTTCCACCATTGAAGTGGAGGTGAAGGCGCTGGTCGAGAAGGGTAAAAGC TTATCCGAAGAAATTTTAAGAAGGCACAGAAAGGAACTGGACAATTTAGCCTTTGCACTG CTCGATAGGGAAACCCTATCCGGAGAGGAAATAAAAAAAATTATTGACCCAAACAACACG AGGGATTACTCCGGCAAAGTGCCTGTTCTGAGTAAGGGCTCCAAATCGGACGGTGCGGCA AGCGGCCCAGAAAATGAGAAGCGGGAGGGAAATTCCACGCGTGGGGGGGGAGGCAGCGCA AATGGGAGCCAGCCAAATGAGAGCCGCTCAAATGAGGGCCTTCCAAATGAGGGCCTTCCA AATGTGGGTCTTCCAAATGTGGGCCTTCCAAATGACCGACAGGAAGTAAAACAGGCCGAT AAAGGAACCCCCGCGGAGGAACTCAAACGTGCTAGCAGCGACCATGTGCTCAAAAAGAAG GGCAAACGAGGTGAACGGGAGAAGCACGGACATGCACCCACCACAGATAATGGCAAAATC GAAATTGTGAGGAAGAGCGCCAAAAATGCCGTCAAAAAGATAAGGAAGAAATATGCTAAA GACCCCAATGTTAAGAATAAGAAAATACTGAAAGTTGTGAATGAGCATAAACCGTACGAC GCGGATAGGAAGGCGGCTGGGGGAAATTTCCAAAATGAACATGGAAGAAATGGCAAAAAT GGGTTAAATGGCGCAAATGATCCAAATGGCCCAAATGACCCATTGGGAAAACTGGACAAA CGCAGCTACCCGAAGGGGCCCTCGCCCGACGGCGGCAATAACAACAGCGTGGTAAAAAAT ATGAGCGAAGTGTTGAGCAAGGAATTTGCCCCCCCCTACGAACAAAACGGCGATAACGAA AGCCCCGATTTTGTAAAAGCGAAAGAATTGACCCTTAACAATTTCAAGGAGGCCGTGGAC ACGTCCCACATAAAGAACGTCGGCGAAATGAAGAAGTTCAACATTTTTGAGCACAACTTG GGGAAACTCTTCCTCTTCGACATTTTTGGCAGCTAG
  • Download Fasta

  • Fasta :-

    MFKHYENAVKRIMNAKYENESLASTGSEKNGDEENSALLQNNEATGMNKKKSKKTNNDNR KYKYYENFFNKKRNKKWNYFMIFFLGICFGFAIWPFFMTIITYKLFYKDNFNSSNFNTSN TSASLKPYGNDRSKKGENGKVSVKDQSQKNSSPHFRPIRFEEIAGIDESKLELLEVVDFI RNREKYQEMGARMPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEIYVGQGAK RIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGAGQREHDQTLNQLLVEMDGFSNSI HIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDVNGRKRILEIYIKKIKSDLKAEDIDK IARLTPGFSGADLENVVNEATILATRNKKSVVTIGELFEARDKVSMGPERKSLRQSDHQR RITAYHEAGHAIVAYFLQPKTDPIHKATIISRGNALGYVEQIPVDDRHNYFKSQMEAKLA VCMGGRTAEEIVFGKSETSSGASSDISRATEIAYKMVTEWGMSDKLGPLNYKKRMGDGYS SNRLSAQTISTIEVEVKALVEKGKSLSEEILRRHRKELDNLAFALLDRETLSGEEIKKII DPNNTRDYSGKVPVLSKGSKSDGAASGPENEKREGNSTRGGGGSANGSQPNESRSNEGLP NEGLPNVGLPNVGLPNDRQEVKQADKGTPAEELKRASSDHVLKKKGKRGEREKHGHAPTT DNGKIEIVRKSAKNAVKKIRKKYAKDPNVKNKKILKVVNEHKPYDADRKAAGGNFQNEHG RNGKNGLNGANDPNGPNDPLGKLDKRSYPKGPSPDGGNNNSVVKNMSEVLSKEFAPPYEQ NGDNESPDFVKAKELTLNNFKEAVDTSHIKNVGEMKKFNIFEHNLGKLFLFDIFGS

  • title: ATP binding site
  • coordinates: P202,P203,G204,S205,G206,K207,T208,M209,D260,N309
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_100935147 SVKDQSQKNS0.996unspPVX_100935147 SVKDQSQKNS0.996unspPVX_100935147 SVKDQSQKNS0.996unspPVX_100935412 SPERKSLRQS0.997unspPVX_100935592 SRETLSGEEI0.996unspPVX_100935609 STRDYSGKVP0.992unspPVX_100935619 SLSKGSKSDG0.991unspPVX_100935626 SDGAASGPEN0.992unspPVX_100935731 SIVRKSAKNA0.997unspPVX_100935831 SSEVLSKEFA0.99unspPVX_10093552 SNKKKSKKTN0.992unspPVX_100935142 SNGKVSVKDQ0.998unsp
PVX_100935      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India