PVX_100950 | 3-hydroxyisobutyryl-coenzyme A hydrolase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003860      

  • Computed_GO_Functions:  3-hydroxyisobutyryl-CoA hydrolase activity      

  • Computed_GO_Process_IDs:  GO:0008152      

  • Computed_GO_Processes:  metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_100950OTHER0.8821820.0001430.117676
No Results

  • Fasta :-

    >PVX_100950 MQKLGSRLHLGEAKCGRRGFQHYVVKPERGGSLFCARHFFAREANPQSELNGAPFCERRQ VSGFFTKARNNCSVDGKGRNEILFEKMEKKDSNILHMTKQSVSSEKAATVDSAKGGSGEG EPLLKHGDEDKVASRKGENQSREPLPPVIDLELSEVWSKKTLILNFKNSVFEIILNRPEK LNAINKDMINGLLNIVKSLNSDDRCHLIIIKSSNTTCFCSGSDVKDIVQNKEKGMQHLKQ LYMYIHYLSKMKKPVLCIWNGYAMGGGLGISMYAKFRVINKKAIFAMPENKIGFFPDISC SYFFKKYFGRNIGLHLGLTSLRLNEADLVNFKICSNYVEDVGGLLNEIYNIGRPNQKEFE RELSTILGKYPPKVTTETKPVLTHELISNIDRYYSVAANLNDLLSKLKKDQRNPFCQQTL EAINQNCLSSCNLWFEYFLYNYDKPLEEVLDNDFKITQHFLYHTDTFEKGVTELLVKKNK SFKWSSARESGDLHAGPSVEDILTNSGLLSIRGELT
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_100950.fa Sequence name : PVX_100950 Sequence length : 516 VALUES OF COMPUTED PARAMETERS Coef20 : 3.722 CoefTot : -1.797 ChDiff : 12 ZoneTo : 42 KR : 9 DE : 2 CleavSite : 31 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.424 1.088 0.209 0.615 MesoH : -0.375 0.333 -0.353 0.246 MuHd_075 : 44.465 29.206 13.176 9.060 MuHd_095 : 47.268 18.468 12.681 10.523 MuHd_100 : 41.186 15.506 10.298 8.903 MuHd_105 : 32.116 13.890 7.274 7.689 Hmax_075 : 12.600 10.500 0.865 5.750 Hmax_095 : 9.100 5.800 2.272 3.859 Hmax_100 : 9.000 7.700 0.898 4.260 Hmax_105 : 13.767 8.633 1.685 5.343 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0697 0.9303 DFMC : 0.1659 0.8341 This protein is probably imported in mitochondria. f(Ser) = 0.0476 f(Arg) = 0.1429 CMi = 0.17637 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 516 PVX_100950 MQKLGSRLHLGEAKCGRRGFQHYVVKPERGGSLFCARHFFAREANPQSELNGAPFCERRQVSGFFTKARNNCSVDGKGRN 80 EILFEKMEKKDSNILHMTKQSVSSEKAATVDSAKGGSGEGEPLLKHGDEDKVASRKGENQSREPLPPVIDLELSEVWSKK 160 TLILNFKNSVFEIILNRPEKLNAINKDMINGLLNIVKSLNSDDRCHLIIIKSSNTTCFCSGSDVKDIVQNKEKGMQHLKQ 240 LYMYIHYLSKMKKPVLCIWNGYAMGGGLGISMYAKFRVINKKAIFAMPENKIGFFPDISCSYFFKKYFGRNIGLHLGLTS 320 LRLNEADLVNFKICSNYVEDVGGLLNEIYNIGRPNQKEFERELSTILGKYPPKVTTETKPVLTHELISNIDRYYSVAANL 400 NDLLSKLKKDQRNPFCQQTLEAINQNCLSSCNLWFEYFLYNYDKPLEEVLDNDFKITQHFLYHTDTFEKGVTELLVKKNK 480 SFKWSSARESGDLHAGPSVEDILTNSGLLSIRGELT 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_100950 3 ----MQK|LG 0.059 . PVX_100950 7 MQKLGSR|LH 0.065 . PVX_100950 14 LHLGEAK|CG 0.067 . PVX_100950 17 GEAKCGR|RG 0.089 . PVX_100950 18 EAKCGRR|GF 0.116 . PVX_100950 26 FQHYVVK|PE 0.064 . PVX_100950 29 YVVKPER|GG 0.075 . PVX_100950 37 GSLFCAR|HF 0.113 . PVX_100950 42 ARHFFAR|EA 0.223 . PVX_100950 58 GAPFCER|RQ 0.078 . PVX_100950 59 APFCERR|QV 0.269 . PVX_100950 67 VSGFFTK|AR 0.062 . PVX_100950 69 GFFTKAR|NN 0.103 . PVX_100950 77 NCSVDGK|GR 0.083 . PVX_100950 79 SVDGKGR|NE 0.090 . PVX_100950 86 NEILFEK|ME 0.055 . PVX_100950 89 LFEKMEK|KD 0.075 . PVX_100950 90 FEKMEKK|DS 0.122 . PVX_100950 99 NILHMTK|QS 0.061 . PVX_100950 106 QSVSSEK|AA 0.067 . PVX_100950 114 ATVDSAK|GG 0.073 . PVX_100950 125 EGEPLLK|HG 0.058 . PVX_100950 131 KHGDEDK|VA 0.074 . PVX_100950 135 EDKVASR|KG 0.081 . PVX_100950 136 DKVASRK|GE 0.090 . PVX_100950 142 KGENQSR|EP 0.073 . PVX_100950 159 LSEVWSK|KT 0.056 . PVX_100950 160 SEVWSKK|TL 0.109 . PVX_100950 167 TLILNFK|NS 0.056 . PVX_100950 177 FEIILNR|PE 0.061 . PVX_100950 180 ILNRPEK|LN 0.141 . PVX_100950 186 KLNAINK|DM 0.082 . PVX_100950 197 GLLNIVK|SL 0.074 . PVX_100950 204 SLNSDDR|CH 0.098 . PVX_100950 211 CHLIIIK|SS 0.063 . PVX_100950 225 CSGSDVK|DI 0.069 . PVX_100950 231 KDIVQNK|EK 0.071 . PVX_100950 233 IVQNKEK|GM 0.065 . PVX_100950 239 KGMQHLK|QL 0.072 . PVX_100950 250 YIHYLSK|MK 0.067 . PVX_100950 252 HYLSKMK|KP 0.055 . PVX_100950 253 YLSKMKK|PV 0.185 . PVX_100950 275 GISMYAK|FR 0.072 . PVX_100950 277 SMYAKFR|VI 0.097 . PVX_100950 281 KFRVINK|KA 0.069 . PVX_100950 282 FRVINKK|AI 0.149 . PVX_100950 291 FAMPENK|IG 0.054 . PVX_100950 305 SCSYFFK|KY 0.075 . PVX_100950 306 CSYFFKK|YF 0.173 . PVX_100950 310 FKKYFGR|NI 0.123 . PVX_100950 322 LGLTSLR|LN 0.082 . PVX_100950 332 ADLVNFK|IC 0.060 . PVX_100950 353 EIYNIGR|PN 0.084 . PVX_100950 357 IGRPNQK|EF 0.074 . PVX_100950 361 NQKEFER|EL 0.115 . PVX_100950 369 LSTILGK|YP 0.065 . PVX_100950 373 LGKYPPK|VT 0.064 . PVX_100950 379 KVTTETK|PV 0.076 . PVX_100950 392 LISNIDR|YY 0.119 . PVX_100950 406 LNDLLSK|LK 0.062 . PVX_100950 408 DLLSKLK|KD 0.057 . PVX_100950 409 LLSKLKK|DQ 0.144 . PVX_100950 412 KLKKDQR|NP 0.088 . PVX_100950 444 FLYNYDK|PL 0.079 . PVX_100950 455 VLDNDFK|IT 0.063 . PVX_100950 469 HTDTFEK|GV 0.076 . PVX_100950 477 VTELLVK|KN 0.053 . PVX_100950 478 TELLVKK|NK 0.086 . PVX_100950 480 LLVKKNK|SF 0.081 . PVX_100950 483 KKNKSFK|WS 0.097 . PVX_100950 488 FKWSSAR|ES 0.131 . PVX_100950 512 SGLLSIR|GE 0.077 . ____________________________^_________________

  • Fasta :-

    >PVX_100950 GCTTCAAATGGGTGCCTTTTCCATCTGCACATAGCTTTGCAAGTCCCACACGTGAAACGA GGAACATATTCATATTTTATGCCAACCCCCCCTTTTTCCACAACTTGTTGCATTTTGTTA AGTTCTTTTTCGTGCAATTTTCAACGCCTTCAAAAAAAAAGGGGGGAAATATTTACCAAA CAAAGGCATACACGTGTAGAGGCGCGGTTGGGCATTGCCAAGCATTCGCAACACATACGC GTAGCGAAGTAACACCCCGCCGCTTCCGACCGCCCACAACGCAGGTATGCAAAAATTAGG CTCGCGACTCCATCTGGGAGAGGCCAAGTGCGGAAGACGGGGCTTTCAGCATTATGTAGT CAAGCCTGAGAGGGGCGGCTCTCTTTTTTGTGCGCGCCATTTTTTTGCCAGAGAAGCCAA CCCGCAGAGTGAGTTGAACGGCGCTCCCTTCTGCGAAAGGAGACAAGTCAGCGGCTTCTT CACCAAAGCGAGGAACAACTGCTCCGTCGATGGAAAAGGAAGAAATGAAATACTTTTTGA AAAAATGGAAAAAAAAGATAGCAATATACTCCATATGACGAAGCAGAGCGTGTCCAGTGA GAAAGCAGCCACAGTCGATTCTGCGAAAGGGGGAAGCGGGGAAGGAGAGCCACTTCTAAA ACATGGGGATGAAGACAAAGTGGCCAGTCGAAAGGGGGAGAACCAAAGTAGGGAACCCCT CCCCCCAGTCATAGACCTAGAACTGTCCGAAGTGTGGTCCAAAAAAACGCTCATTCTAAA TTTCAAAAATAGCGTATTCGAAATAATTTTAAACAGGCCAGAAAAGCTAAACGCAATTAA CAAAGATATGATTAACGGGTTGCTAAACATTGTGAAGAGCCTAAACAGCGATGATAGGTG TCACCTGATCATCATAAAAAGTAGCAACACGACGTGCTTCTGCTCCGGTTCCGATGTCAA GGACATTGTCCAAAATAAAGAAAAAGGGATGCAGCATTTGAAGCAGCTCTACATGTACAT TCACTACTTATCCAAAATGAAAAAACCTGTCTTGTGCATATGGAATGGTTATGCTATGGG AGGAGGTTTAGGGATTTCCATGTATGCAAAATTTAGGGTAATAAATAAGAAGGCCATATT TGCCATGCCTGAAAATAAGATTGGCTTCTTCCCAGATATCAGTTGCTCCTACTTTTTTAA AAAATATTTCGGAAGGAACATTGGGCTGCATCTAGGGTTGACATCCCTACGATTAAACGA AGCAGATTTAGTCAACTTTAAAATTTGCAGCAATTACGTTGAAGATGTGGGTGGACTGCT CAACGAGATTTACAACATTGGGAGGCCAAACCAGAAGGAGTTCGAGAGGGAACTCTCCAC CATTTTAGGCAAGTACCCCCCGAAGGTCACTACAGAGACGAAGCCGGTACTTACCCACGA GCTGATTAGCAACATTGATAGGTACTACAGTGTGGCCGCTAACCTAAACGATCTTCTTAG CAAGTTGAAGAAGGACCAGCGCAACCCCTTTTGCCAACAAACGCTAGAAGCTATAAACCA GAACTGCCTCTCCAGCTGCAACTTATGGTTTGAGTATTTCCTTTACAATTACGATAAGCC CCTGGAGGAGGTGCTGGACAACGATTTTAAAATTACGCAGCATTTTTTGTACCACACAGA TACTTTCGAGAAGGGCGTAACGGAACTGCTCGTGAAGAAAAATAAATCCTTCAAGTGGAG CTCCGCGCGGGAAAGTGGCGATCTGCACGCGGGTCCAAGCGTTGAAGATATTCTGACGAA CAGCGGGTTGCTGTCCATTCGGGGGGAGCTCACATGA
  • Download Fasta

  • Fasta :-

    MQKLGSRLHLGEAKCGRRGFQHYVVKPERGGSLFCARHFFAREANPQSELNGAPFCERRQ VSGFFTKARNNCSVDGKGRNEILFEKMEKKDSNILHMTKQSVSSEKAATVDSAKGGSGEG EPLLKHGDEDKVASRKGENQSREPLPPVIDLELSEVWSKKTLILNFKNSVFEIILNRPEK LNAINKDMINGLLNIVKSLNSDDRCHLIIIKSSNTTCFCSGSDVKDIVQNKEKGMQHLKQ LYMYIHYLSKMKKPVLCIWNGYAMGGGLGISMYAKFRVINKKAIFAMPENKIGFFPDISC SYFFKKYFGRNIGLHLGLTSLRLNEADLVNFKICSNYVEDVGGLLNEIYNIGRPNQKEFE RELSTILGKYPPKVTTETKPVLTHELISNIDRYYSVAANLNDLLSKLKKDQRNPFCQQTL EAINQNCLSSCNLWFEYFLYNYDKPLEEVLDNDFKITQHFLYHTDTFEKGVTELLVKKNK SFKWSSARESGDLHAGPSVEDILTNSGLLSIRGELT

  • title: substrate binding site
  • coordinates: L181,A183,T215,S220,G221,S222,D223,V224,Y262,M264,G265,G266,P288,E289,I292
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_100950481 SKKNKSFKWS0.991unspPVX_100950481 SKKNKSFKWS0.991unspPVX_100950481 SKKNKSFKWS0.991unspPVX_100950498 SHAGPSVEDI0.991unspPVX_100950103 SKQSVSSEKA0.994unspPVX_100950104 SQSVSSEKAA0.996unsp
PVX_100950      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India