PVX_111035 | aspartyl protease, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_111035SP0.0820410.8312250.086734CS pos: 23-24. TFS-SP. Pr: 0.7732
No Results

  • Fasta :-

    >PVX_111035 MRPNFVARIGLLCLLNIWLSTFSSPLLKNGGGSRFYAASQGVDKMRRNSPHSARGDLPSE RIDQMNNPILIKLIKQDIPGKKMTTYYGQVAVGEKSENVVNVLFDTGSTEFWIPFENCKG TNFPDSHKKYKRTKSFRNKFNKEGLPTLLEVNYLSGKVIGFDGYDTVKLGANLSVPNTNI AFATKIEIPVLEEFKWDGILGLGFENEDSRKRGMKPFLDHLKDENILTERGYKNQFGYYL SDRGGFISFGGVDSRLKRSSEEEVMWSPVSTEMGFWTIDIVGVRKEYEPNVNVKGNQKEV VVKYEGFHDGGKKSIVDTGTFFIYAPKKTMESYLSGLEINSCEDKDKLPYIVFQIKSKGI EGIKGSAVIELVLSPNDYVIEYLNEENWTRECVVGIQADEQKEESHIDGWTLGQIFIKSY YTIFDKDNLQIGFVRSRKEKGNEKKGDHFRGSFLNVRTKRGSGSGNARRRGTYNGPLSA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_111035.fa Sequence name : PVX_111035 Sequence length : 479 VALUES OF COMPUTED PARAMETERS Coef20 : 4.688 CoefTot : -0.341 ChDiff : 8 ZoneTo : 42 KR : 4 DE : 0 CleavSite : 37 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.665 1.676 0.224 0.597 MesoH : -0.961 0.111 -0.497 0.208 MuHd_075 : 28.921 20.183 8.086 8.250 MuHd_095 : 23.704 18.678 7.086 6.548 MuHd_100 : 17.276 13.467 6.458 5.210 MuHd_105 : 14.310 10.165 5.415 4.355 Hmax_075 : 17.033 16.100 3.174 5.290 Hmax_095 : 17.062 9.713 5.679 7.510 Hmax_100 : 14.400 21.000 4.465 7.510 Hmax_105 : 12.900 8.600 4.440 3.580 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0431 0.9569 DFMC : 0.0851 0.9149 This protein is probably imported in mitochondria. f(Ser) = 0.1190 f(Arg) = 0.0714 CMi = 0.70028 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 479 PVX_111035 MRPNFVARIGLLCLLNIWLSTFSSPLLKNGGGSRFYAASQGVDKMRRNSPHSARGDLPSERIDQMNNPILIKLIKQDIPG 80 KKMTTYYGQVAVGEKSENVVNVLFDTGSTEFWIPFENCKGTNFPDSHKKYKRTKSFRNKFNKEGLPTLLEVNYLSGKVIG 160 FDGYDTVKLGANLSVPNTNIAFATKIEIPVLEEFKWDGILGLGFENEDSRKRGMKPFLDHLKDENILTERGYKNQFGYYL 240 SDRGGFISFGGVDSRLKRSSEEEVMWSPVSTEMGFWTIDIVGVRKEYEPNVNVKGNQKEVVVKYEGFHDGGKKSIVDTGT 320 FFIYAPKKTMESYLSGLEINSCEDKDKLPYIVFQIKSKGIEGIKGSAVIELVLSPNDYVIEYLNEENWTRECVVGIQADE 400 QKEESHIDGWTLGQIFIKSYYTIFDKDNLQIGFVRSRKEKGNEKKGDHFRGSFLNVRTKRGSGSGNARRRGTYNGPLSA 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

  • Fasta :-

    >PVX_111035 GTTAAGCGCGTAAATAGGAAAGTTTTAAAATTGCCTTTTTTGTGTTTGTTCTCTGCATCG AAGGAGGCTTGTCCCGTTTCTCCGTCGTGCGCGGGGGTCACATGTACACACATATGTGTA TGTTTTTTATTGCCTTCTTGTTTTTTCGCTTTCTTGATTCCTTGTTTTTCCTTTTTCGCC CCCTTTTTTGAGCAACTTCAAGATGAGGCCCAACTTCGTTGCGCGAATTGGGCTTCTGTG CCTGCTGAACATATGGCTAAGCACATTTTCCTCGCCCCTTTTAAAAAATGGAGGGGGAAG CCGCTTCTACGCCGCTTCCCAGGGGGTAGACAAAATGCGGAGGAATTCTCCCCACAGCGC ACGTGGTGATCTCCCCTCAGAAAGGATCGACCAAATGAACAACCCCATTTTAATCAAATT GATCAAGCAAGACATACCAGGGAAGAAAATGACAACGTACTATGGCCAAGTGGCCGTAGG AGAGAAGTCAGAAAATGTGGTGAATGTCTTATTCGACACGGGCTCTACCGAGTTTTGGAT TCCATTCGAAAATTGCAAAGGAACCAATTTTCCCGATTCTCACAAAAAATATAAGCGCAC CAAATCATTTAGAAATAAATTTAACAAGGAGGGTCTCCCAACGTTGTTGGAGGTTAACTA TCTCAGTGGGAAGGTCATCGGGTTTGACGGCTACGACACGGTAAAGTTGGGCGCAAATCT CTCCGTTCCGAACACAAACATTGCCTTTGCTACGAAGATAGAAATACCCGTCTTAGAAGA ATTTAAGTGGGATGGCATTTTAGGTCTCGGATTTGAGAACGAGGATTCGAGGAAGCGCGG GATGAAGCCCTTCTTGGACCATTTGAAGGATGAAAATATCTTAACGGAGAGGGGCTACAA GAACCAGTTTGGCTATTACCTATCTGATAGAGGGGGGTTCATCAGCTTCGGGGGGGTGGA CAGCCGGTTGAAGAGATCATCCGAGGAGGAAGTTATGTGGAGCCCCGTTTCGACCGAGAT GGGCTTCTGGACAATCGACATCGTGGGAGTGAGAAAGGAATACGAGCCAAACGTGAACGT CAAAGGAAACCAAAAGGAGGTGGTCGTGAAGTACGAAGGTTTTCACGATGGAGGGAAGAA GTCCATTGTGGACACAGGGACGTTCTTTATATATGCCCCGAAGAAAACGATGGAGAGTTA CCTAAGCGGGTTGGAAATAAATTCTTGTGAGGATAAAGACAAGCTCCCTTACATTGTGTT TCAAATAAAATCGAAAGGAATTGAAGGGATAAAAGGCTCGGCCGTCATCGAATTGGTTCT TTCGCCAAACGACTACGTCATTGAGTACCTGAATGAGGAGAACTGGACCAGAGAATGCGT CGTGGGGATTCAGGCAGACGAACAGAAGGAGGAAAGTCACATCGACGGATGGACACTAGG GCAGATATTTATAAAATCTTACTACACCATTTTCGATAAGGATAATTTACAAATAGGCTT CGTTCGAAGTAGGAAAGAAAAAGGAAACGAAAAAAAGGGCGACCATTTTAGGGGGTCATT TCTTAACGTAAGGACAAAGAGGGGCAGCGGTAGTGGCAATGCCCGTCGGAGGGGGACTTA CAACGGACCCCTCTCAGCATAA
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  • Fasta :-

    MRPNFVARIGLLCLLNIWLSTFSSPLLKNGGGSRFYAASQGVDKMRRNSPHSARGDLPSE RIDQMNNPILIKLIKQDIPGKKMTTYYGQVAVGEKSENVVNVLFDTGSTEFWIPFENCKG TNFPDSHKKYKRTKSFRNKFNKEGLPTLLEVNYLSGKVIGFDGYDTVKLGANLSVPNTNI AFATKIEIPVLEEFKWDGILGLGFENEDSRKRGMKPFLDHLKDENILTERGYKNQFGYYL SDRGGFISFGGVDSRLKRSSEEEVMWSPVSTEMGFWTIDIVGVRKEYEPNVNVKGNQKEV VVKYEGFHDGGKKSIVDTGTFFIYAPKKTMESYLSGLEINSCEDKDKLPYIVFQIKSKGI EGIKGSAVIELVLSPNDYVIEYLNEENWTRECVVGIQADEQKEESHIDGWTLGQIFIKSY YTIFDKDNLQIGFVRSRKEKGNEKKGDHFRGSFLNVRTKRGSGSGNARRRGTYNGPLSA

  • title: catalytic residue
  • coordinates: D105,D317
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_111035126 SNFPDSHKKY0.997unspPVX_111035126 SNFPDSHKKY0.997unspPVX_111035126 SNFPDSHKKY0.997unspPVX_111035135 SKRTKSFRNK0.992unspPVX_111035259 SRLKRSSEEE0.997unspPVX_111035260 SLKRSSEEEV0.998unspPVX_111035270 SWSPVSTEMG0.991unspPVX_111035314 SGGKKSIVDT0.992unspPVX_111035374 SELVLSPNDY0.994unspPVX_111035405 SQKEESHIDG0.995unspPVX_111035462 STKRGSGSGN0.996unspPVX_11103549 SMRRNSPHSA0.998unspPVX_11103552 SNSPHSARGD0.996unsp
PVX_111035      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India