PVX_112700 | unspecified product

UniProt_ID: A5KCQ0

Computed_GO_Component_IDs:
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	_ID	Prediction	OTHER	SP	mTP	CS_Position
	PVX_112700	OTHER	0.999972	0.000011	0.000017

No Results

Fasta :-
>PVX_112700 MVENEVYNRDMRIVRSRERLDGRPTLRSFFNKDGLLLKTYGWIVRNAVGLIVLIHGLNSH TRFSFLRHNVHVFNNRAILMDADNYYIYKNSWIEHFNKNGYSVFGIDLQSHGESEGWENL SLNVKEFDDLVYDVLEYIQKVQDDNARYMNYSSSSYSSSSSRSNSSSNSSSNSGSNSNSN SNSNSRGGESPRNDNSANRMIAPLPVYLIGQSMGGNVALRALQIVGKYRGLNRRLNIRGC VSLSGMIAVEALGLPSSYIYKSFFMPLSRFLSDFLPTLRLLCEMPYKRFQYIRDIGRFDT MRYRRGITCRFAYELLKAMDNLDHDMRFMPRDIPVLFIHSSKDKLCYPGGVVSFYNRLNI RNKELHMLNYMEHMLTMEPGNERVLSKIMNWLYNMSRPQRITA
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_112700.fa Sequence name : PVX_112700 Sequence length : 403 VALUES OF COMPUTED PARAMETERS Coef20 : 4.445 CoefTot : 0.000 ChDiff : 14 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.241 1.529 0.242 0.588 MesoH : -0.259 0.550 -0.226 0.233 MuHd_075 : 25.559 13.076 6.450 3.517 MuHd_095 : 7.820 16.495 3.976 5.160 MuHd_100 : 7.974 14.349 4.714 4.364 MuHd_105 : 12.727 10.688 5.021 4.086 Hmax_075 : -11.113 0.962 -3.753 -1.260 Hmax_095 : -13.213 2.363 -4.615 1.593 Hmax_100 : -18.800 5.600 -4.360 0.560 Hmax_105 : -9.100 4.783 -3.380 0.340 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8250 0.1750 DFMC : 0.9107 0.0893

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 403 PVX_112700 MVENEVYNRDMRIVRSRERLDGRPTLRSFFNKDGLLLKTYGWIVRNAVGLIVLIHGLNSHTRFSFLRHNVHVFNNRAILM 80 DADNYYIYKNSWIEHFNKNGYSVFGIDLQSHGESEGWENLSLNVKEFDDLVYDVLEYIQKVQDDNARYMNYSSSSYSSSS 160 SRSNSSSNSSSNSGSNSNSNSNSNSRGGESPRNDNSANRMIAPLPVYLIGQSMGGNVALRALQIVGKYRGLNRRLNIRGC 240 VSLSGMIAVEALGLPSSYIYKSFFMPLSRFLSDFLPTLRLLCEMPYKRFQYIRDIGRFDTMRYRRGITCRFAYELLKAMD 320 NLDHDMRFMPRDIPVLFIHSSKDKLCYPGGVVSFYNRLNIRNKELHMLNYMEHMLTMEPGNERVLSKIMNWLYNMSRPQR 400 ITA 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_112700 9 ENEVYNR|DM 0.101 . PVX_112700 12 VYNRDMR|IV 0.300 . PVX_112700 15 RDMRIVR|SR 0.335 . PVX_112700 17 MRIVRSR|ER 0.136 . PVX_112700 19 IVRSRER|LD 0.074 . PVX_112700 23 RERLDGR|PT 0.095 . PVX_112700 27 DGRPTLR|SF 0.115 . PVX_112700 32 LRSFFNK|DG 0.079 . PVX_112700 38 KDGLLLK|TY 0.071 . PVX_112700 45 TYGWIVR|NA 0.096 . PVX_112700 62 GLNSHTR|FS 0.112 . PVX_112700 67 TRFSFLR|HN 0.117 . PVX_112700 76 VHVFNNR|AI 0.080 . PVX_112700 89 DNYYIYK|NS 0.063 . PVX_112700 98 WIEHFNK|NG 0.063 . PVX_112700 125 NLSLNVK|EF 0.067 . PVX_112700 140 VLEYIQK|VQ 0.059 . PVX_112700 147 VQDDNAR|YM 0.087 . PVX_112700 162 YSSSSSR|SN 0.206 . PVX_112700 186 NSNSNSR|GG 0.093 . PVX_112700 192 RGGESPR|ND 0.097 . PVX_112700 199 NDNSANR|MI 0.101 . PVX_112700 220 GGNVALR|AL 0.110 . PVX_112700 227 ALQIVGK|YR 0.070 . PVX_112700 229 QIVGKYR|GL 0.107 . PVX_112700 233 KYRGLNR|RL 0.082 . PVX_112700 234 YRGLNRR|LN 0.144 . PVX_112700 238 NRRLNIR|GC 0.087 . PVX_112700 261 PSSYIYK|SF 0.090 . PVX_112700 269 FFMPLSR|FL 0.146 . PVX_112700 279 DFLPTLR|LL 0.064 . PVX_112700 287 LCEMPYK|RF 0.063 . PVX_112700 288 CEMPYKR|FQ 0.129 . PVX_112700 293 KRFQYIR|DI 0.205 . PVX_112700 297 YIRDIGR|FD 0.081 . PVX_112700 302 GRFDTMR|YR 0.105 . PVX_112700 304 FDTMRYR|RG 0.073 . PVX_112700 305 DTMRYRR|GI 0.499 . PVX_112700 310 RRGITCR|FA 0.194 . PVX_112700 317 FAYELLK|AM 0.061 . PVX_112700 327 NLDHDMR|FM 0.084 . PVX_112700 331 DMRFMPR|DI 0.113 . PVX_112700 342 LFIHSSK|DK 0.070 . PVX_112700 344 IHSSKDK|LC 0.082 . PVX_112700 357 VVSFYNR|LN 0.079 . PVX_112700 361 YNRLNIR|NK 0.082 . PVX_112700 363 RLNIRNK|EL 0.072 . PVX_112700 383 MEPGNER|VL 0.097 . PVX_112700 387 NERVLSK|IM 0.070 . PVX_112700 397 WLYNMSR|PQ 0.074 . PVX_112700 400 NMSRPQR|IT 0.299 . ____________________________^_________________

Fasta :-
>PVX_112700 ATGGTTGAAAATGAAGTATATAACCGGGATATGAGAATAGTGCGTAGCAGGGAACGGCTA GATGGAAGGCCAACGCTTCGTTCATTTTTTAATAAGGATGGTTTGCTATTAAAAACATAT GGTTGGATAGTAAGAAATGCGGTAGGCCTTATAGTATTAATTCATGGATTAAATTCACAC ACAAGGTTTTCATTTTTGAGGCATAACGTCCATGTGTTTAATAATAGAGCAATATTAATG GACGCAGATAATTATTACATTTATAAAAATAGCTGGATAGAACATTTTAATAAAAATGGA TATTCTGTCTTCGGAATAGATTTACAAAGCCATGGCGAATCAGAAGGGTGGGAAAATTTA AGTCTTAATGTAAAAGAATTTGATGACTTAGTATATGATGTGCTTGAATATATTCAAAAA GTTCAAGATGATAACGCACGATATATGAATTATAGTAGTAGCAGTTATAGTAGCAGCAGC AGTAGAAGTAATAGTAGCAGCAATAGTAGCAGCAATAGTGGCAGCAATAGTAACAGTAAC AGTAATAGTAACAGCAGAGGCGGTGAGTCGCCTCGTAATGATAATTCGGCCAACCGAATG ATAGCACCCCTTCCAGTATATCTAATTGGCCAATCTATGGGAGGAAACGTTGCTCTAAGA GCATTACAGATAGTCGGAAAATACAGGGGACTTAATCGAAGACTAAATATAAGAGGTTGT GTATCATTATCTGGTATGATTGCTGTAGAAGCATTAGGATTACCAAGCTCATATATATAT AAAAGTTTCTTTATGCCCTTGTCAAGATTCTTGTCCGATTTCTTACCAACATTAAGGCTT TTATGCGAAATGCCTTATAAAAGGTTTCAATATATTCGTGATATAGGTCGATTTGATACA ATGCGTTATAGAAGAGGTATAACATGCAGATTTGCATATGAACTTTTAAAAGCAATGGAT AATTTAGACCATGATATGAGATTCATGCCCAGAGATATCCCGGTATTGTTTATTCATTCA TCGAAGGACAAATTGTGCTATCCTGGAGGCGTTGTTTCATTTTATAATAGACTAAATATT CGTAATAAAGAACTGCACATGTTAAATTATATGGAGCACATGCTAACTATGGAACCAGGA AATGAAAGGGTCTTAAGTAAAATTATGAATTGGCTTTACAACATGTCAAGGCCGCAAAGA ATCACTGCTTAA
Download Fasta

Fasta :-

MVENEVYNRDMRIVRSRERLDGRPTLRSFFNKDGLLLKTYGWIVRNAVGLIVLIHGLNSH TRFSFLRHNVHVFNNRAILMDADNYYIYKNSWIEHFNKNGYSVFGIDLQSHGESEGWENL SLNVKEFDDLVYDVLEYIQKVQDDNARYMNYSSSSYSSSSSRSNSSSNSSSNSGSNSNSN SNSNSRGGESPRNDNSANRMIAPLPVYLIGQSMGGNVALRALQIVGKYRGLNRRLNIRGC VSLSGMIAVEALGLPSSYIYKSFFMPLSRFLSDFLPTLRLLCEMPYKRFQYIRDIGRFDT MRYRRGITCRFAYELLKAMDNLDHDMRFMPRDIPVLFIHSSKDKLCYPGGVVSFYNRLNI RNKELHMLNYMEHMLTMEPGNERVLSKIMNWLYNMSRPQRITA

Acetyl xylan esterase-like

No Results

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	PVX_112700	S	166	0.548	0.030	PVX_112700	S	167	0.547	0.021	PVX_112700	S	170	0.520	0.033	PVX_112700	S	169	0.515	0.017

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	PVX_112700	S	166	0.548	0.030	PVX_112700	S	167	0.547	0.021	PVX_112700	S	170	0.520	0.033	PVX_112700	S	169	0.515	0.017

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	PVX_112700	165 S	SRSNSSSNS	0.995	unsp	PVX_112700	165 S	SRSNSSSNS	0.995	unsp	PVX_112700	165 S	SRSNSSSNS	0.995	unsp	PVX_112700	16 S	RIVRSRERL	0.992	unsp	PVX_112700	160 S	YSSSSSRSN	0.992	unsp

PVX_112700

PVX_112700 | unspecified product

ID's

UniProt_ID: A5KCQ0

GEO Functions

Computed_GO_Component_IDs:

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Curated_GO_Component_IDs:

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Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Acetyl xylan esterase-like

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India