PVX_117565 | vivapain-1

_IDPredictionOTHERSPmTPCS_Position
PVX_117565OTHER0.9995930.0002810.000126
No Results

  • Fasta :-

    >PVX_117565 MAQDIKIMNLTKSSLEALNRNQMLSKKSSRKILKICMYAILTFAMCGVVLICLTAMSNSD GSLTQSGSHNQSGSLKGLSSTPGDGEILNKAEIETLRFIFSNYPHGNRDPTGDDVEKPAD AALPNEEDQKVKIADAGKHIKLMKQYNEIVADMSEDNKEQLAKMLRELLKKKINERKKKR EDPNGNNEEGKEVINISVPSFNYKRVSANQDDSDDEEEVSVAQIEGLFVNLKYASKFFNF MNKYKRSYKDINEQMEKYKNFKMNYLKIKKHNETNQMYKMKVNQFSDYSKKDFESYFRKL LPIPDHLKKKYVVPFSSMNNGKGKNVVTSSSGANLLADVPEILDYREKGIVHEPKDQGLC GSCWAFASVGNVECMYAKEHNKTILTLSEQEVVDCSKLNFGCDGGHPFYSFIYAIENGIC MGDDYKYKAMDNLFCLNYRCKNKVTLSSVGGVKENELIRALNEVGPVSVNVGVTDDFSFY GGGIFNGTCTEELNHSVLLVGYGQVQSSKIFQEKNAYDDASGVTKKGALSYPSKADDGIQ YYWIIKNSWSKFWGENGFMRISRNKEGDNVFCGIGVEVFYPIL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_117565.fa Sequence name : PVX_117565 Sequence length : 583 VALUES OF COMPUTED PARAMETERS Coef20 : 4.223 CoefTot : -0.014 ChDiff : 2 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.406 2.488 0.645 0.799 MesoH : -0.130 0.354 -0.242 0.223 MuHd_075 : 8.652 7.861 3.371 2.160 MuHd_095 : 15.312 8.735 4.844 2.308 MuHd_100 : 16.782 11.055 5.465 3.318 MuHd_105 : 26.291 17.710 7.712 5.381 Hmax_075 : 9.217 11.317 0.287 3.827 Hmax_095 : 9.200 10.900 0.824 3.620 Hmax_100 : 8.000 11.700 0.468 3.930 Hmax_105 : 7.087 9.537 -0.014 3.281 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9802 0.0198 DFMC : 0.9841 0.0159
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 583 PVX_117565 MAQDIKIMNLTKSSLEALNRNQMLSKKSSRKILKICMYAILTFAMCGVVLICLTAMSNSDGSLTQSGSHNQSGSLKGLSS 80 TPGDGEILNKAEIETLRFIFSNYPHGNRDPTGDDVEKPADAALPNEEDQKVKIADAGKHIKLMKQYNEIVADMSEDNKEQ 160 LAKMLRELLKKKINERKKKREDPNGNNEEGKEVINISVPSFNYKRVSANQDDSDDEEEVSVAQIEGLFVNLKYASKFFNF 240 MNKYKRSYKDINEQMEKYKNFKMNYLKIKKHNETNQMYKMKVNQFSDYSKKDFESYFRKLLPIPDHLKKKYVVPFSSMNN 320 GKGKNVVTSSSGANLLADVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNVECMYAKEHNKTILTLSEQEVVDCSKLNF 400 GCDGGHPFYSFIYAIENGICMGDDYKYKAMDNLFCLNYRCKNKVTLSSVGGVKENELIRALNEVGPVSVNVGVTDDFSFY 480 GGGIFNGTCTEELNHSVLLVGYGQVQSSKIFQEKNAYDDASGVTKKGALSYPSKADDGIQYYWIIKNSWSKFWGENGFMR 560 ISRNKEGDNVFCGIGVEVFYPIL 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ....................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_117565 6 -MAQDIK|IM 0.055 . PVX_117565 12 KIMNLTK|SS 0.079 . PVX_117565 20 SLEALNR|NQ 0.080 . PVX_117565 26 RNQMLSK|KS 0.071 . PVX_117565 27 NQMLSKK|SS 0.198 . PVX_117565 30 LSKKSSR|KI 0.106 . PVX_117565 31 SKKSSRK|IL 0.094 . PVX_117565 34 SSRKILK|IC 0.077 . PVX_117565 76 NQSGSLK|GL 0.084 . PVX_117565 90 DGEILNK|AE 0.061 . PVX_117565 97 AEIETLR|FI 0.101 . PVX_117565 108 NYPHGNR|DP 0.071 . PVX_117565 117 TGDDVEK|PA 0.091 . PVX_117565 130 PNEEDQK|VK 0.056 . PVX_117565 132 EEDQKVK|IA 0.085 . PVX_117565 138 KIADAGK|HI 0.062 . PVX_117565 141 DAGKHIK|LM 0.064 . PVX_117565 144 KHIKLMK|QY 0.078 . PVX_117565 158 DMSEDNK|EQ 0.059 . PVX_117565 163 NKEQLAK|ML 0.074 . PVX_117565 166 QLAKMLR|EL 0.081 . PVX_117565 170 MLRELLK|KK 0.064 . PVX_117565 171 LRELLKK|KI 0.089 . PVX_117565 172 RELLKKK|IN 0.097 . PVX_117565 176 KKKINER|KK 0.082 . PVX_117565 177 KKINERK|KK 0.085 . PVX_117565 178 KINERKK|KR 0.101 . PVX_117565 179 INERKKK|RE 0.425 . PVX_117565 180 NERKKKR|ED 0.214 . PVX_117565 191 GNNEEGK|EV 0.086 . PVX_117565 204 VPSFNYK|RV 0.121 . PVX_117565 205 PSFNYKR|VS 0.132 . PVX_117565 232 GLFVNLK|YA 0.088 . PVX_117565 236 NLKYASK|FF 0.061 . PVX_117565 243 FFNFMNK|YK 0.066 . PVX_117565 245 NFMNKYK|RS 0.067 . PVX_117565 246 FMNKYKR|SY 0.419 . PVX_117565 249 KYKRSYK|DI 0.239 . PVX_117565 257 INEQMEK|YK 0.063 . PVX_117565 259 EQMEKYK|NF 0.066 . PVX_117565 262 EKYKNFK|MN 0.066 . PVX_117565 267 FKMNYLK|IK 0.066 . PVX_117565 269 MNYLKIK|KH 0.071 . PVX_117565 270 NYLKIKK|HN 0.096 . PVX_117565 279 ETNQMYK|MK 0.069 . PVX_117565 281 NQMYKMK|VN 0.070 . PVX_117565 290 QFSDYSK|KD 0.064 . PVX_117565 291 FSDYSKK|DF 0.145 . PVX_117565 298 DFESYFR|KL 0.080 . PVX_117565 299 FESYFRK|LL 0.082 . PVX_117565 308 PIPDHLK|KK 0.059 . PVX_117565 309 IPDHLKK|KY 0.091 . PVX_117565 310 PDHLKKK|YV 0.178 . PVX_117565 322 SSMNNGK|GK 0.084 . PVX_117565 324 MNNGKGK|NV 0.101 . PVX_117565 346 PEILDYR|EK 0.081 . PVX_117565 348 ILDYREK|GI 0.068 . PVX_117565 355 GIVHEPK|DQ 0.093 . PVX_117565 378 VECMYAK|EH 0.062 . PVX_117565 382 YAKEHNK|TI 0.062 . PVX_117565 397 EVVDCSK|LN 0.061 . PVX_117565 426 CMGDDYK|YK 0.057 . PVX_117565 428 GDDYKYK|AM 0.066 . PVX_117565 439 LFCLNYR|CK 0.086 . PVX_117565 441 CLNYRCK|NK 0.061 . PVX_117565 443 NYRCKNK|VT 0.065 . PVX_117565 453 SSVGGVK|EN 0.063 . PVX_117565 459 KENELIR|AL 0.115 . PVX_117565 509 GQVQSSK|IF 0.061 . PVX_117565 514 SKIFQEK|NA 0.080 . PVX_117565 525 DASGVTK|KG 0.065 . PVX_117565 526 ASGVTKK|GA 0.121 . PVX_117565 534 ALSYPSK|AD 0.083 . PVX_117565 546 QYYWIIK|NS 0.060 . PVX_117565 551 IKNSWSK|FW 0.103 . PVX_117565 560 GENGFMR|IS 0.124 . PVX_117565 563 GFMRISR|NK 0.239 . PVX_117565 565 MRISRNK|EG 0.075 . ____________________________^_________________

  • Fasta :-

    >PVX_117565 CGTACCAATAGGATAGCGCGGTGGCTGCTTTGTCCTGTGCTGCGTGGGAGCATTTGATAA AAGCGGCCAAGTGGGAGTGTCAATTGGGGCGACCGACTGATTGGTTTGTTGGCTGGCTGA CCGATTGGTTGACTGATTCACTGCGTGGCTGTTTGCACGGTGGGTGGTGAAGCGCAAGTG TACGCACTGCCTGTAGGTTACGCCTCTCTTGCGCACGATCCAGCCGCTTTTACGTGTACC GTAGGCTTTTTCCTTTTGGGAGCCTCTTAACGCCGCTTCTCCCCTGTTTATCCCCCGCTA ACCACCCCTTATGCAAAATGGCGCAGGATATCAAAATCATGAACCTGACCAAGTCCAGCC TGGAGGCCCTGAACAGAAACCAAATGCTCTCCAAAAAGAGCAGTAGGAAAATTCTGAAGA TATGCATGTACGCAATTCTGACATTTGCAATGTGCGGTGTGGTGTTGATATGCCTCACTG CCATGTCGAACAGTGATGGGAGCCTTACCCAGAGTGGCAGCCATAACCAGAGCGGCAGCC TGAAGGGTCTCTCTTCCACCCCTGGTGATGGAGAAATCCTCAACAAGGCTGAAATAGAAA CGCTGAGATTTATCTTTTCAAATTACCCCCACGGGAATAGAGATCCAACTGGTGATGATG TGGAAAAACCAGCAGATGCCGCCTTACCAAATGAAGAGGATCAAAAGGTAAAAATTGCAG ACGCGGGAAAGCACATCAAATTGATGAAGCAGTACAACGAAATTGTGGCGGACATGAGTG AGGACAACAAAGAACAGCTAGCCAAAATGTTGAGGGAACTTTTGAAAAAAAAAATAAATG AAAGGAAGAAGAAGAGAGAAGACCCAAATGGTAATAATGAAGAAGGGAAAGAAGTTATCA ATATAAGTGTGCCAAGTTTTAATTACAAACGAGTCAGCGCCAACCAAGATGATAGTGACG ACGAGGAAGAGGTGAGTGTGGCGCAGATAGAAGGCCTATTCGTCAACCTGAAATATGCCT CGAAATTTTTCAACTTCATGAACAAGTATAAAAGAAGCTATAAAGACATCAACGAGCAGA TGGAGAAATATAAAAACTTCAAAATGAATTATCTCAAAATTAAGAAGCATAATGAAACGA ATCAAATGTACAAAATGAAGGTAAACCAGTTTAGCGACTATTCGAAGAAAGATTTCGAGA GCTATTTTAGAAAGTTGCTACCCATCCCGGATCACCTGAAGAAGAAATATGTAGTGCCGT TCAGTTCCATGAATAACGGAAAGGGCAAAAATGTAGTGACTAGCAGCAGCGGCGCTAACC TTCTTGCCGACGTGCCAGAAATTTTAGACTATAGAGAAAAAGGAATTGTGCATGAACCCA AGGACCAAGGGCTATGCGGCTCGTGCTGGGCCTTTGCCAGTGTAGGAAATGTTGAATGCA TGTACGCCAAGGAGCATAACAAGACCATTTTAACTTTGAGTGAGCAAGAAGTTGTAGATT GTTCTAAGCTAAATTTCGGATGTGATGGAGGACACCCATTTTATTCTTTCATTTATGCCA TCGAAAATGGAATTTGCATGGGGGACGACTATAAATATAAAGCGATGGATAATTTATTTT GCCTAAACTATAGATGTAAGAATAAAGTTACTCTCTCCTCTGTTGGTGGGGTGAAAGAAA ACGAATTGATACGTGCTCTAAATGAAGTAGGTCCTGTGTCCGTCAATGTCGGGGTAACGG ACGATTTCTCCTTTTACGGCGGAGGAATATTCAATGGCACTTGCACAGAAGAATTAAACC ACTCCGTTCTTCTTGTTGGCTATGGCCAAGTGCAGAGCAGCAAAATATTTCAAGAAAAGA ACGCTTATGATGATGCCTCTGGAGTTACGAAGAAGGGAGCGCTATCATACCCATCAAAGG CCGATGATGGTATTCAGTACTATTGGATTATTAAAAATTCGTGGAGCAAATTTTGGGGAG AAAACGGATTTATGAGAATTAGTCGAAATAAGGAGGGAGATAACGTGTTTTGCGGAATCG GTGTCGAAGTTTTCTACCCCATTTTGTAA
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  • Fasta :-

    MAQDIKIMNLTKSSLEALNRNQMLSKKSSRKILKICMYAILTFAMCGVVLICLTAMSNSD GSLTQSGSHNQSGSLKGLSSTPGDGEILNKAEIETLRFIFSNYPHGNRDPTGDDVEKPAD AALPNEEDQKVKIADAGKHIKLMKQYNEIVADMSEDNKEQLAKMLRELLKKKINERKKKR EDPNGNNEEGKEVINISVPSFNYKRVSANQDDSDDEEEVSVAQIEGLFVNLKYASKFFNF MNKYKRSYKDINEQMEKYKNFKMNYLKIKKHNETNQMYKMKVNQFSDYSKKDFESYFRKL LPIPDHLKKKYVVPFSSMNNGKGKNVVTSSSGANLLADVPEILDYREKGIVHEPKDQGLC GSCWAFASVGNVECMYAKEHNKTILTLSEQEVVDCSKLNFGCDGGHPFYSFIYAIENGIC MGDDYKYKAMDNLFCLNYRCKNKVTLSSVGGVKENELIRALNEVGPVSVNVGVTDDFSFY GGGIFNGTCTEELNHSVLLVGYGQVQSSKIFQEKNAYDDASGVTKKGALSYPSKADDGIQ YYWIIKNSWSKFWGENGFMRISRNKEGDNVFCGIGVEVFYPIL

  • title: active site
  • coordinates: Q357,C363,H495,N547
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_117565289 SFSDYSKKDF0.996unspPVX_117565289 SFSDYSKKDF0.996unspPVX_117565289 SFSDYSKKDF0.996unspPVX_11756525 SNQMLSKKSS0.995unspPVX_117565213 SNQDDSDDEE0.994unsp
PVX_117565      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India