PVX_117615 | signal peptide peptidase, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_117615OTHER0.9999550.0000010.000044
No Results

  • Fasta :-

    >PVX_117615 MNLLKLISKNNKKMKNDNMGCSIVYYSSYVIILLTIVLSKFFVIPLMAQMFLYTFITIYI GSHDSLKQLEQVDDRNKKADNITAYDAIMFPIIGSGALLTLYFAYKFLDPYYVNMLLTVY LTLAGVFSLQGVCANILEPALPKFFKKDEYVKTFKLPGFISKEPVIFNTNKGEIISFLFC FFIGARWIFYKDFITHNVLAVSFCFQAISLVILSNFLIGFLLLSGLFVYDIFWVFGNDVM VTVAKSFEAPVKLLFPVSKDPVHYSMLGLGDIIIPGIVISLCLRFDYYLHRNKIHKGNFK KMFNDISIHEAFKKYYFFTISVFYQIGLVVTYCMLFYFEHAQPALLYLVPACILAIVGCS LCKGEFKIMVKYQEITDKSNSSDDGKKKVADKDEMYKSQESIISNAKKRITNK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_117615.fa Sequence name : PVX_117615 Sequence length : 413 VALUES OF COMPUTED PARAMETERS Coef20 : 3.504 CoefTot : -1.729 ChDiff : 12 ZoneTo : 63 KR : 6 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.065 2.612 0.649 0.844 MesoH : 1.017 1.509 0.051 0.598 MuHd_075 : 26.341 24.913 7.332 7.103 MuHd_095 : 33.660 19.741 9.063 6.958 MuHd_100 : 30.426 19.072 9.375 6.893 MuHd_105 : 30.380 20.405 9.724 7.302 Hmax_075 : 9.683 26.367 4.830 7.840 Hmax_095 : -2.538 4.375 -3.923 1.592 Hmax_100 : -2.300 3.500 -3.611 1.900 Hmax_105 : 3.700 8.167 -2.229 2.987 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7346 0.2654 DFMC : 0.6712 0.3288
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 413 PVX_117615 MNLLKLISKNNKKMKNDNMGCSIVYYSSYVIILLTIVLSKFFVIPLMAQMFLYTFITIYIGSHDSLKQLEQVDDRNKKAD 80 NITAYDAIMFPIIGSGALLTLYFAYKFLDPYYVNMLLTVYLTLAGVFSLQGVCANILEPALPKFFKKDEYVKTFKLPGFI 160 SKEPVIFNTNKGEIISFLFCFFIGARWIFYKDFITHNVLAVSFCFQAISLVILSNFLIGFLLLSGLFVYDIFWVFGNDVM 240 VTVAKSFEAPVKLLFPVSKDPVHYSMLGLGDIIIPGIVISLCLRFDYYLHRNKIHKGNFKKMFNDISIHEAFKKYYFFTI 320 SVFYQIGLVVTYCMLFYFEHAQPALLYLVPACILAIVGCSLCKGEFKIMVKYQEITDKSNSSDDGKKKVADKDEMYKSQE 400 SIISNAKKRITNK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_117615 5 --MNLLK|LI 0.069 . PVX_117615 9 LLKLISK|NN 0.058 . PVX_117615 12 LISKNNK|KM 0.063 . PVX_117615 13 ISKNNKK|MK 0.113 . PVX_117615 15 KNNKKMK|ND 0.087 . PVX_117615 40 LTIVLSK|FF 0.062 . PVX_117615 67 GSHDSLK|QL 0.087 . PVX_117615 75 LEQVDDR|NK 0.078 . PVX_117615 77 QVDDRNK|KA 0.061 . PVX_117615 78 VDDRNKK|AD 0.187 . PVX_117615 106 TLYFAYK|FL 0.086 . PVX_117615 143 LEPALPK|FF 0.064 . PVX_117615 146 ALPKFFK|KD 0.068 . PVX_117615 147 LPKFFKK|DE 0.146 . PVX_117615 152 KKDEYVK|TF 0.054 . PVX_117615 155 EYVKTFK|LP 0.059 . PVX_117615 162 LPGFISK|EP 0.060 . PVX_117615 171 VIFNTNK|GE 0.064 . PVX_117615 186 CFFIGAR|WI 0.085 . PVX_117615 191 ARWIFYK|DF 0.091 . PVX_117615 245 VMVTVAK|SF 0.090 . PVX_117615 252 SFEAPVK|LL 0.069 . PVX_117615 259 LLFPVSK|DP 0.069 . PVX_117615 284 VISLCLR|FD 0.077 . PVX_117615 291 FDYYLHR|NK 0.086 . PVX_117615 293 YYLHRNK|IH 0.055 . PVX_117615 296 HRNKIHK|GN 0.102 . PVX_117615 300 IHKGNFK|KM 0.063 . PVX_117615 301 HKGNFKK|MF 0.133 . PVX_117615 313 SIHEAFK|KY 0.060 . PVX_117615 314 IHEAFKK|YY 0.115 . PVX_117615 363 VGCSLCK|GE 0.063 . PVX_117615 367 LCKGEFK|IM 0.061 . PVX_117615 371 EFKIMVK|YQ 0.062 . PVX_117615 378 YQEITDK|SN 0.080 . PVX_117615 386 NSSDDGK|KK 0.068 . PVX_117615 387 SSDDGKK|KV 0.136 . PVX_117615 388 SDDGKKK|VA 0.165 . PVX_117615 392 KKKVADK|DE 0.069 . PVX_117615 397 DKDEMYK|SQ 0.078 . PVX_117615 407 SIISNAK|KR 0.059 . PVX_117615 408 IISNAKK|RI 0.142 . PVX_117615 409 ISNAKKR|IT 0.341 . PVX_117615 413 KKRITNK|-- 0.074 . ____________________________^_________________

  • Fasta :-

    >PVX_117615 GGCGAACGAATGACGAACGAACGAATGACGAACGAACGAATGACGAACGAACGAACGACG AACTAACGAACGAATGCAATAAAGCGATAACGCAAAAGCGCGAAAGTACCAAAACGAAAA AGAAAACGCAAAAAGGCGAACAGCAAAAGCGCCAAAGCGCAGAAATACAAAAAATTAATC AACCTTCGCAGCCTTGGCAAAAGCGCTAAAAATACGACGAAAAGATAATTTTTTTTTGTG AAAATATAAAACTCCGTTGGACTACATGAATTTACTCAAGCTGATCAGTAAGAACAATAA AAAAATGAAGAACGACAATATGGGATGCTCCATAGTTTATTATTCCAGCTATGTCATAAT ACTCCTAACCATCGTGCTCTCGAAGTTTTTTGTGATCCCGTTGATGGCTCAAATGTTTCT GTACACATTCATAACGATATACATCGGGAGCCATGACAGTTTGAAGCAATTAGAGCAAGT TGACGACAGGAATAAGAAGGCAGATAATATTACAGCCTACGATGCGATTATGTTCCCCAT TATCGGCTCTGGAGCTTTGTTAACACTTTATTTTGCGTACAAGTTTTTAGACCCGTACTA TGTGAATATGCTTCTGACGGTATACCTAACCCTAGCAGGAGTTTTCTCTCTACAAGGGGT TTGTGCGAACATTTTGGAACCTGCTTTGCCGAAATTTTTCAAAAAAGACGAATATGTTAA GACGTTTAAATTGCCGGGATTCATTTCGAAGGAGCCCGTCATTTTCAATACAAACAAGGG AGAAATAATCAGCTTCCTGTTTTGCTTCTTCATCGGTGCGCGATGGATTTTTTATAAAGA CTTTATCACCCACAATGTGCTGGCCGTGTCCTTTTGTTTCCAAGCCATATCGCTAGTCAT CCTGAGCAACTTTTTAATTGGATTCCTGCTACTGTCCGGACTCTTCGTGTATGACATATT CTGGGTTTTTGGAAACGACGTTATGGTGACCGTTGCGAAGTCATTCGAAGCCCCCGTGAA GCTCCTTTTCCCAGTATCGAAAGACCCAGTACATTACAGCATGCTAGGGTTAGGGGACAT CATCATCCCCGGGATTGTAATATCCCTGTGTCTACGTTTCGACTATTACCTGCACAGAAA TAAAATACACAAAGGGAATTTCAAAAAAATGTTTAACGATATATCAATTCATGAGGCCTT CAAGAAATATTATTTCTTCACCATTTCGGTTTTCTACCAAATAGGGTTGGTAGTGACATA CTGTATGCTCTTTTATTTCGAGCATGCACAGCCTGCTTTGTTGTACCTTGTGCCTGCCTG TATATTGGCAATAGTAGGATGTTCCTTATGTAAAGGGGAATTTAAAATAATGGTGAAGTA CCAGGAAATTACGGATAAGAGTAATTCTTCGGATGATGGGAAGAAGAAAGTGGCTGATAA GGACGAAATGTACAAGAGCCAAGAGTCCATCATATCGAACGCGAAGAAGAGAATAACGAA TAAGTAG
  • Download Fasta

  • Fasta :-

    MNLLKLISKNNKKMKNDNMGCSIVYYSSYVIILLTIVLSKFFVIPLMAQMFLYTFITIYI GSHDSLKQLEQVDDRNKKADNITAYDAIMFPIIGSGALLTLYFAYKFLDPYYVNMLLTVY LTLAGVFSLQGVCANILEPALPKFFKKDEYVKTFKLPGFISKEPVIFNTNKGEIISFLFC FFIGARWIFYKDFITHNVLAVSFCFQAISLVILSNFLIGFLLLSGLFVYDIFWVFGNDVM VTVAKSFEAPVKLLFPVSKDPVHYSMLGLGDIIIPGIVISLCLRFDYYLHRNKIHKGNFK KMFNDISIHEAFKKYYFFTISVFYQIGLVVTYCMLFYFEHAQPALLYLVPACILAIVGCS LCKGEFKIMVKYQEITDKSNSSDDGKKKVADKDEMYKSQESIISNAKKRITNK

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IDSitePeptideScoreMethod
PVX_117615381 SDKSNSSDDG0.998unsp
PVX_117615      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India