PVX_117760 | peptidase, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_117760OTHER0.6614810.3344830.004036
No Results

  • Fasta :-

    >PVX_117760 MRVNSLLYALSSLMVFHLDFFYKGNRVNYVSAYISSIHKYTNYGNGSGGKSGSNGSGNGS GDGGQNKPSFFGKRKIDANGVSNRSAVSYFKKKFPQVYQQNGVSTSSTSGDPRQASEKKD PETTSQLQQQREEQPPQQPQQSDNQGGVRDTMANPPIEERLANLKKVMQENNIDVYILIN SDEHNSEIINDKDKKIFYLSNYSGADGILILTKDKQIMYVNALYELQANKELNHDIFSLR ISKITNRDEIYETIASLEFNNIAVDGKNTSVAFYEKLKSKIESTYPGKTVEEKVIYENDM NQIVKNENINFLILEKSLVDLKDYQVNNKLVFIHDRKFNGACSGEKLEKLRQIFSFENKN VDKLLLSELDEIAYILNLRGFDYTFSPLFYGYLYFEFNREKDDFEKMILFTVSKNLSESS IRHLNTVNVTVKEYETVVEYLRDNVSSKTMALTKVGNEVGAVKAPPSKELPIKESDSQKK YEISLSPYINLMIYMLFNKDKILLEKSPVLHMKAVKNDVEIENMKEAHVLDALALLQFFH WCDEKRKTKELFNETEMSLKNKVDYFRSTKPNFIFPSFATISASGPNAAVIHYEVTDSTN AKITPGIYLLDSGGQYLHGTTDVTRTTHFGEPTAEEKKIYTLVLKGHLRLRKVIFASYTN SMALDFIARESLFKHFLDYNHGTGHGVGLFLNVHEGGCSIGPTAGTPLKPAMVLSNEPGY YLENKFGVRIENMQFVISKKNTDNTEFYSFEDLTLYPYEKKLLDFSILTAEEIRDINEYH ETIRKTLLPRLKQNPSEYGEGVVKYLMDITQPIAIN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_117760.fa Sequence name : PVX_117760 Sequence length : 816 VALUES OF COMPUTED PARAMETERS Coef20 : 4.575 CoefTot : -6.223 ChDiff : -6 ZoneTo : 110 KR : 13 DE : 3 CleavSite : 86 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.324 1.465 0.083 0.607 MesoH : -0.287 0.235 -0.365 0.246 MuHd_075 : 39.295 26.160 10.801 10.267 MuHd_095 : 34.638 24.441 11.257 9.052 MuHd_100 : 30.545 21.488 8.685 7.075 MuHd_105 : 33.016 26.288 10.446 7.390 Hmax_075 : 5.250 14.117 2.832 4.217 Hmax_095 : 6.200 11.000 0.562 4.700 Hmax_100 : 14.400 11.000 3.075 4.700 Hmax_105 : 17.150 18.550 3.712 6.078 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2564 0.7436 DFMC : 0.2828 0.7172 This protein is probably imported in chloroplast. f(Ser) = 0.1727 f(Arg) = 0.0364 CMi = 1.42857 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 816 PVX_117760 MRVNSLLYALSSLMVFHLDFFYKGNRVNYVSAYISSIHKYTNYGNGSGGKSGSNGSGNGSGDGGQNKPSFFGKRKIDANG 80 VSNRSAVSYFKKKFPQVYQQNGVSTSSTSGDPRQASEKKDPETTSQLQQQREEQPPQQPQQSDNQGGVRDTMANPPIEER 160 LANLKKVMQENNIDVYILINSDEHNSEIINDKDKKIFYLSNYSGADGILILTKDKQIMYVNALYELQANKELNHDIFSLR 240 ISKITNRDEIYETIASLEFNNIAVDGKNTSVAFYEKLKSKIESTYPGKTVEEKVIYENDMNQIVKNENINFLILEKSLVD 320 LKDYQVNNKLVFIHDRKFNGACSGEKLEKLRQIFSFENKNVDKLLLSELDEIAYILNLRGFDYTFSPLFYGYLYFEFNRE 400 KDDFEKMILFTVSKNLSESSIRHLNTVNVTVKEYETVVEYLRDNVSSKTMALTKVGNEVGAVKAPPSKELPIKESDSQKK 480 YEISLSPYINLMIYMLFNKDKILLEKSPVLHMKAVKNDVEIENMKEAHVLDALALLQFFHWCDEKRKTKELFNETEMSLK 560 NKVDYFRSTKPNFIFPSFATISASGPNAAVIHYEVTDSTNAKITPGIYLLDSGGQYLHGTTDVTRTTHFGEPTAEEKKIY 640 TLVLKGHLRLRKVIFASYTNSMALDFIARESLFKHFLDYNHGTGHGVGLFLNVHEGGCSIGPTAGTPLKPAMVLSNEPGY 720 YLENKFGVRIENMQFVISKKNTDNTEFYSFEDLTLYPYEKKLLDFSILTAEEIRDINEYHETIRKTLLPRLKQNPSEYGE 800 GVVKYLMDITQPIAIN 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................ 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_117760 2 -----MR|VN 0.077 . PVX_117760 23 HLDFFYK|GN 0.071 . PVX_117760 26 FFYKGNR|VN 0.068 . PVX_117760 39 YISSIHK|YT 0.074 . PVX_117760 50 GNGSGGK|SG 0.081 . PVX_117760 67 GDGGQNK|PS 0.067 . PVX_117760 73 KPSFFGK|RK 0.095 . PVX_117760 74 PSFFGKR|KI 0.245 . PVX_117760 75 SFFGKRK|ID 0.085 . PVX_117760 84 ANGVSNR|SA 0.199 . PVX_117760 91 SAVSYFK|KK 0.066 . PVX_117760 92 AVSYFKK|KF 0.136 . PVX_117760 93 VSYFKKK|FP 0.120 . PVX_117760 113 STSGDPR|QA 0.153 . PVX_117760 118 PRQASEK|KD 0.065 . PVX_117760 119 RQASEKK|DP 0.121 . PVX_117760 131 SQLQQQR|EE 0.077 . PVX_117760 149 DNQGGVR|DT 0.118 . PVX_117760 160 NPPIEER|LA 0.083 . PVX_117760 165 ERLANLK|KV 0.073 . PVX_117760 166 RLANLKK|VM 0.090 . PVX_117760 192 SEIINDK|DK 0.065 . PVX_117760 194 IINDKDK|KI 0.068 . PVX_117760 195 INDKDKK|IF 0.088 . PVX_117760 213 GILILTK|DK 0.065 . PVX_117760 215 LILTKDK|QI 0.063 . PVX_117760 230 YELQANK|EL 0.059 . PVX_117760 240 HDIFSLR|IS 0.084 . PVX_117760 243 FSLRISK|IT 0.098 . PVX_117760 247 ISKITNR|DE 0.096 . PVX_117760 267 NIAVDGK|NT 0.074 . PVX_117760 276 SVAFYEK|LK 0.082 . PVX_117760 278 AFYEKLK|SK 0.070 . PVX_117760 280 YEKLKSK|IE 0.068 . PVX_117760 288 ESTYPGK|TV 0.077 . PVX_117760 293 GKTVEEK|VI 0.067 . PVX_117760 305 DMNQIVK|NE 0.061 . PVX_117760 316 NFLILEK|SL 0.063 . PVX_117760 322 KSLVDLK|DY 0.061 . PVX_117760 329 DYQVNNK|LV 0.072 . PVX_117760 336 LVFIHDR|KF 0.095 . PVX_117760 337 VFIHDRK|FN 0.091 . PVX_117760 346 GACSGEK|LE 0.052 . PVX_117760 349 SGEKLEK|LR 0.055 . PVX_117760 351 EKLEKLR|QI 0.098 . PVX_117760 359 IFSFENK|NV 0.104 . PVX_117760 363 ENKNVDK|LL 0.066 . PVX_117760 379 AYILNLR|GF 0.074 . PVX_117760 399 LYFEFNR|EK 0.101 . PVX_117760 401 FEFNREK|DD 0.066 . PVX_117760 406 EKDDFEK|MI 0.058 . PVX_117760 414 ILFTVSK|NL 0.062 . PVX_117760 422 LSESSIR|HL 0.113 . PVX_117760 432 TVNVTVK|EY 0.079 . PVX_117760 442 TVVEYLR|DN 0.081 . PVX_117760 448 RDNVSSK|TM 0.062 . PVX_117760 454 KTMALTK|VG 0.061 . PVX_117760 463 NEVGAVK|AP 0.057 . PVX_117760 468 VKAPPSK|EL 0.068 . PVX_117760 473 SKELPIK|ES 0.072 . PVX_117760 479 KESDSQK|KY 0.085 . PVX_117760 480 ESDSQKK|YE 0.090 . PVX_117760 499 IYMLFNK|DK 0.066 . PVX_117760 501 MLFNKDK|IL 0.073 . PVX_117760 506 DKILLEK|SP 0.067 . PVX_117760 513 SPVLHMK|AV 0.099 . PVX_117760 516 LHMKAVK|ND 0.068 . PVX_117760 525 VEIENMK|EA 0.063 . PVX_117760 545 FHWCDEK|RK 0.060 . PVX_117760 546 HWCDEKR|KT 0.178 . PVX_117760 547 WCDEKRK|TK 0.079 . PVX_117760 549 DEKRKTK|EL 0.160 . PVX_117760 560 ETEMSLK|NK 0.059 . PVX_117760 562 EMSLKNK|VD 0.060 . PVX_117760 567 NKVDYFR|ST 0.135 . PVX_117760 570 DYFRSTK|PN 0.095 . PVX_117760 602 TDSTNAK|IT 0.078 . PVX_117760 625 GTTDVTR|TT 0.117 . PVX_117760 637 EPTAEEK|KI 0.061 . PVX_117760 638 PTAEEKK|IY 0.094 . PVX_117760 645 IYTLVLK|GH 0.056 . PVX_117760 649 VLKGHLR|LR 0.077 . PVX_117760 651 KGHLRLR|KV 0.109 . PVX_117760 652 GHLRLRK|VI 0.210 . PVX_117760 669 ALDFIAR|ES 0.068 . PVX_117760 674 ARESLFK|HF 0.070 . PVX_117760 709 TAGTPLK|PA 0.066 . PVX_117760 725 GYYLENK|FG 0.078 . PVX_117760 729 ENKFGVR|IE 0.076 . PVX_117760 739 MQFVISK|KN 0.067 . PVX_117760 740 QFVISKK|NT 0.119 . PVX_117760 760 TLYPYEK|KL 0.057 . PVX_117760 761 LYPYEKK|LL 0.087 . PVX_117760 774 LTAEEIR|DI 0.115 . PVX_117760 784 EYHETIR|KT 0.068 . PVX_117760 785 YHETIRK|TL 0.069 . PVX_117760 790 RKTLLPR|LK 0.068 . PVX_117760 792 TLLPRLK|QN 0.060 . PVX_117760 804 YGEGVVK|YL 0.070 . ____________________________^_________________

  • Fasta :-

    >PVX_117760 ACCATCTTGTTTATATAGTTATATATTCACCTGCGCGTATGTACATCTATGCATCTACGC AATCCGCACGTGCATAGATGCCATACGTGTTAACCTGCATGGTACATATTTTCCGCGCCC AGGTCGGCCAGAGTCAACTCTACATAGTGAAGCGGCGCTTGGCTTTGCTTGGCTTAGCTT AGCGTAGCTTTGCGTAGCCCAGCGTAGCCTTCTGAAGAGTCCCCTCGGCAGCTTTCTTTG CGGCACGTTTTTTCGAAAATTTACGTGCACACGTTTTATACGCAGTGCAGCAGGGTTGCT CGCGCAGGCGTGACGTATGATTATTTAGGGGCTGGCGGTTGAGCTGCTAAGCGGTTAAGC TGCCAAGCGGTTGAGCTGCCAAGCAGTTACGCTTCTCCGTACTGGGGCCCCAACCGGTGC GCGGCACCTTCACATCCACCCCCCCTTTTCTCCTCTCCCTCCTCTGCTACCAAATATGCG CGTGAATTCCCTCCTCTACGCGCTTTCTTCTTTAATGGTATTCCATTTAGACTTCTTTTA CAAAGGGAACAGGGTTAACTACGTTTCTGCGTACATCAGTTCGATACACAAGTACACCAA TTACGGCAACGGGAGTGGCGGAAAAAGCGGAAGCAACGGAAGCGGCAACGGAAGCGGCGA CGGAGGCCAGAACAAACCTAGTTTCTTCGGAAAGCGAAAAATAGACGCGAACGGAGTATC GAACAGATCAGCCGTCTCGTACTTCAAGAAAAAGTTCCCTCAGGTTTATCAGCAGAACGG CGTAAGCACCTCCAGCACGTCGGGAGACCCCAGGCAGGCAAGTGAGAAGAAGGACCCAGA AACGACCTCTCAACTGCAGCAGCAGAGGGAGGAGCAGCCCCCACAGCAACCACAACAGAG TGACAATCAAGGAGGAGTTAGAGACACCATGGCAAACCCCCCCATCGAAGAGAGACTCGC AAACCTGAAGAAGGTAATGCAGGAAAACAACATCGATGTGTACATCCTAATAAACAGCGA TGAGCATAACTCAGAAATTATAAACGATAAGGATAAAAAAATATTCTATTTGAGTAACTA CAGTGGAGCAGATGGTATCTTAATACTGACGAAGGATAAGCAAATTATGTACGTGAATGC TCTCTACGAATTACAAGCCAACAAGGAACTGAACCACGACATTTTCTCCCTCCGAATTAG CAAAATTACCAACCGAGATGAAATATACGAAACAATTGCATCCCTCGAATTTAACAACAT TGCAGTAGATGGAAAAAACACCAGCGTCGCTTTTTATGAAAAGTTAAAGAGCAAAATAGA GTCCACTTACCCAGGCAAAACTGTCGAAGAAAAAGTGATTTACGAAAATGATATGAACCA AATTGTAAAAAATGAAAATATAAATTTCCTCATTTTGGAGAAGTCCCTCGTAGATTTAAA AGACTATCAAGTGAATAACAAATTGGTCTTCATCCATGACAGAAAATTTAACGGTGCATG TTCAGGAGAAAAATTAGAAAAATTAAGACAAATATTTTCCTTTGAAAATAAAAACGTAGA TAAGTTACTACTCTCAGAGTTAGACGAAATTGCGTACATTTTAAATTTACGTGGATTTGA TTACACCTTTTCTCCCCTCTTCTATGGCTACCTCTACTTCGAGTTTAACAGAGAAAAGGA CGATTTTGAAAAAATGATTCTCTTCACTGTGTCGAAGAACCTCTCCGAGAGTTCCATCAG ACACCTCAACACGGTTAACGTGACTGTTAAGGAGTACGAAACGGTGGTCGAGTACCTAAG GGACAACGTCTCCTCCAAAACGATGGCCCTCACCAAGGTGGGCAATGAAGTAGGCGCAGT TAAGGCGCCCCCCTCCAAGGAACTCCCCATAAAAGAGTCCGATTCGCAGAAAAAGTACGA AATCTCCCTCAGCCCATACATCAACCTAATGATCTACATGCTCTTCAATAAGGACAAAAT ACTGCTCGAAAAATCCCCCGTTCTTCACATGAAGGCGGTTAAAAACGACGTCGAAATTGA GAACATGAAGGAGGCACATGTGCTGGATGCGTTGGCCCTTTTGCAATTCTTTCACTGGTG TGACGAGAAGAGAAAAACCAAAGAGTTATTTAACGAAACGGAAATGTCTTTAAAAAATAA AGTAGATTACTTCAGATCAACCAAACCAAACTTTATCTTCCCCTCCTTTGCAACCATCTC GGCCAGCGGACCAAATGCTGCAGTCATTCACTACGAAGTAACGGATTCTACAAATGCGAA GATTACACCAGGTATATATCTCCTTGATTCAGGAGGACAGTACCTACACGGAACCACAGA TGTAACTAGAACTACGCATTTTGGAGAACCCACAGCGGAAGAGAAGAAAATCTACACCCT AGTACTTAAAGGACACCTACGTTTAAGAAAAGTTATCTTTGCTAGCTACACGAATTCTAT GGCCCTAGATTTTATTGCGCGTGAAAGTTTATTTAAACACTTCCTCGATTATAATCACGG AACTGGACACGGAGTAGGGTTATTCTTAAACGTCCATGAAGGTGGTTGCTCCATCGGACC AACAGCTGGCACTCCTCTGAAACCTGCTATGGTACTTTCCAACGAACCAGGGTACTACCT AGAAAATAAATTTGGTGTTAGAATCGAAAACATGCAATTTGTAATTAGCAAGAAGAACAC AGATAACACCGAGTTTTACTCCTTTGAAGATTTAACTCTCTATCCGTATGAGAAAAAACT GCTCGACTTTTCCATTCTGACGGCTGAAGAAATTAGAGACATCAATGAATACCACGAGAC CATTAGGAAAACCCTCCTCCCCAGGCTGAAGCAGAACCCCTCCGAATACGGCGAGGGAGT GGTGAAGTACCTCATGGATATCACCCAGCCGATTGCCATCAACTAG
  • Download Fasta

  • Fasta :-

    MRVNSLLYALSSLMVFHLDFFYKGNRVNYVSAYISSIHKYTNYGNGSGGKSGSNGSGNGS GDGGQNKPSFFGKRKIDANGVSNRSAVSYFKKKFPQVYQQNGVSTSSTSGDPRQASEKKD PETTSQLQQQREEQPPQQPQQSDNQGGVRDTMANPPIEERLANLKKVMQENNIDVYILIN SDEHNSEIINDKDKKIFYLSNYSGADGILILTKDKQIMYVNALYELQANKELNHDIFSLR ISKITNRDEIYETIASLEFNNIAVDGKNTSVAFYEKLKSKIESTYPGKTVEEKVIYENDM NQIVKNENINFLILEKSLVDLKDYQVNNKLVFIHDRKFNGACSGEKLEKLRQIFSFENKN VDKLLLSELDEIAYILNLRGFDYTFSPLFYGYLYFEFNREKDDFEKMILFTVSKNLSESS IRHLNTVNVTVKEYETVVEYLRDNVSSKTMALTKVGNEVGAVKAPPSKELPIKESDSQKK YEISLSPYINLMIYMLFNKDKILLEKSPVLHMKAVKNDVEIENMKEAHVLDALALLQFFH WCDEKRKTKELFNETEMSLKNKVDYFRSTKPNFIFPSFATISASGPNAAVIHYEVTDSTN AKITPGIYLLDSGGQYLHGTTDVTRTTHFGEPTAEEKKIYTLVLKGHLRLRKVIFASYTN SMALDFIARESLFKHFLDYNHGTGHGVGLFLNVHEGGCSIGPTAGTPLKPAMVLSNEPGY YLENKFGVRIENMQFVISKKNTDNTEFYSFEDLTLYPYEKKLLDFSILTAEEIRDINEYH ETIRKTLLPRLKQNPSEYGEGVVKYLMDITQPIAIN

  • title: active site
  • coordinates: H592,D611,D622,L689,E717,E731
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_117760477 SKESDSQKKY0.997unspPVX_117760477 SKESDSQKKY0.997unspPVX_117760477 SKESDSQKKY0.997unspPVX_117760738 SQFVISKKNT0.996unspPVX_117760116 SPRQASEKKD0.996unspPVX_117760279 SEKLKSKIES0.992unsp
PVX_117760      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India