PVX_118405 | metalloprotease, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_118405OTHER0.9999980.0000010.000001
No Results

  • Fasta :-

    >PVX_118405 MEEVRKRVERGKEKIKQIGKEIHQFDLKKSVEKIFVKKGKEKKLSDMLFLVQYSLKYKNV CKWPNYNDLFVINCNINDNFKSMLQKNGGFVHHYKKVTPDGGADSTPTMNQGRETTLGGS NQSGTANRNAEGDAPQTGEKQIDANSENGLSSKTNKPRSGADRGGQIYPEGTPLTKGELP QNSPSEKHSPNNPPPDNSLPNSALIKKESKFVTHFNDDISPYDKIKLQLFMYFVLNNYRV KILVDALSALNRPINVIYINCPNNKEQKKTFFQKVGSFFTPPYKVGDVFVNNKNNYQPKS KENCSCSELSPIRYSNNPTTAPSKERKSNYVGGYNPISNTIWLCSNNINSYYKLKYILTH ELIHAFDFARANIDMYNCHHIACSEIRAYNMSNQCSYFNSKYFSPDHDVFTNFKSPSISA TPKNKCIYNNVYSSLNQYKPCANNTHQFINHVFEKCLHDYWPFMCSPEQDSKYKPSKIFK KDS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_118405.fa Sequence name : PVX_118405 Sequence length : 483 VALUES OF COMPUTED PARAMETERS Coef20 : 3.423 CoefTot : 0.000 ChDiff : 22 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.229 1.071 -0.171 0.364 MesoH : -0.931 0.028 -0.510 0.111 MuHd_075 : 14.295 13.601 5.616 4.464 MuHd_095 : 42.388 27.048 12.760 8.205 MuHd_100 : 52.101 34.132 15.435 10.220 MuHd_105 : 50.992 33.273 14.809 10.079 Hmax_075 : -19.717 2.333 -6.378 0.723 Hmax_095 : -4.900 9.000 -1.647 2.240 Hmax_100 : 7.000 15.000 0.931 4.620 Hmax_105 : -4.638 9.187 -1.807 1.855 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8499 0.1501 DFMC : 0.9099 0.0901
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 483 PVX_118405 MEEVRKRVERGKEKIKQIGKEIHQFDLKKSVEKIFVKKGKEKKLSDMLFLVQYSLKYKNVCKWPNYNDLFVINCNINDNF 80 KSMLQKNGGFVHHYKKVTPDGGADSTPTMNQGRETTLGGSNQSGTANRNAEGDAPQTGEKQIDANSENGLSSKTNKPRSG 160 ADRGGQIYPEGTPLTKGELPQNSPSEKHSPNNPPPDNSLPNSALIKKESKFVTHFNDDISPYDKIKLQLFMYFVLNNYRV 240 KILVDALSALNRPINVIYINCPNNKEQKKTFFQKVGSFFTPPYKVGDVFVNNKNNYQPKSKENCSCSELSPIRYSNNPTT 320 APSKERKSNYVGGYNPISNTIWLCSNNINSYYKLKYILTHELIHAFDFARANIDMYNCHHIACSEIRAYNMSNQCSYFNS 400 KYFSPDHDVFTNFKSPSISATPKNKCIYNNVYSSLNQYKPCANNTHQFINHVFEKCLHDYWPFMCSPEQDSKYKPSKIFK 480 KDS 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_118405 5 --MEEVR|KR 0.069 . PVX_118405 6 -MEEVRK|RV 0.101 . PVX_118405 7 MEEVRKR|VE 0.187 . PVX_118405 10 VRKRVER|GK 0.480 . PVX_118405 12 KRVERGK|EK 0.079 . PVX_118405 14 VERGKEK|IK 0.066 . PVX_118405 16 RGKEKIK|QI 0.109 . PVX_118405 20 KIKQIGK|EI 0.064 . PVX_118405 28 IHQFDLK|KS 0.058 . PVX_118405 29 HQFDLKK|SV 0.307 . PVX_118405 33 LKKSVEK|IF 0.067 . PVX_118405 37 VEKIFVK|KG 0.057 . PVX_118405 38 EKIFVKK|GK 0.171 . PVX_118405 40 IFVKKGK|EK 0.068 . PVX_118405 42 VKKGKEK|KL 0.086 . PVX_118405 43 KKGKEKK|LS 0.115 . PVX_118405 56 LVQYSLK|YK 0.063 . PVX_118405 58 QYSLKYK|NV 0.088 . PVX_118405 62 KYKNVCK|WP 0.061 . PVX_118405 81 NINDNFK|SM 0.081 . PVX_118405 86 FKSMLQK|NG 0.079 . PVX_118405 95 GFVHHYK|KV 0.089 . PVX_118405 96 FVHHYKK|VT 0.122 . PVX_118405 113 PTMNQGR|ET 0.104 . PVX_118405 128 QSGTANR|NA 0.125 . PVX_118405 140 APQTGEK|QI 0.069 . PVX_118405 153 ENGLSSK|TN 0.059 . PVX_118405 156 LSSKTNK|PR 0.091 . PVX_118405 158 SKTNKPR|SG 0.177 . PVX_118405 163 PRSGADR|GG 0.127 . PVX_118405 176 EGTPLTK|GE 0.056 . PVX_118405 187 QNSPSEK|HS 0.071 . PVX_118405 206 PNSALIK|KE 0.076 . PVX_118405 207 NSALIKK|ES 0.091 . PVX_118405 210 LIKKESK|FV 0.086 . PVX_118405 224 DISPYDK|IK 0.065 . PVX_118405 226 SPYDKIK|LQ 0.062 . PVX_118405 239 FVLNNYR|VK 0.062 . PVX_118405 241 LNNYRVK|IL 0.077 . PVX_118405 252 ALSALNR|PI 0.107 . PVX_118405 265 INCPNNK|EQ 0.065 . PVX_118405 268 PNNKEQK|KT 0.075 . PVX_118405 269 NNKEQKK|TF 0.141 . PVX_118405 274 KKTFFQK|VG 0.063 . PVX_118405 284 FFTPPYK|VG 0.056 . PVX_118405 293 DVFVNNK|NN 0.057 . PVX_118405 299 KNNYQPK|SK 0.113 . PVX_118405 301 NYQPKSK|EN 0.063 . PVX_118405 313 SELSPIR|YS 0.078 . PVX_118405 324 PTTAPSK|ER 0.054 . PVX_118405 326 TAPSKER|KS 0.100 . PVX_118405 327 APSKERK|SN 0.247 . PVX_118405 353 NINSYYK|LK 0.063 . PVX_118405 355 NSYYKLK|YI 0.083 . PVX_118405 370 HAFDFAR|AN 0.110 . PVX_118405 387 IACSEIR|AY 0.099 . PVX_118405 401 CSYFNSK|YF 0.074 . PVX_118405 414 DVFTNFK|SP 0.068 . PVX_118405 423 SISATPK|NK 0.075 . PVX_118405 425 SATPKNK|CI 0.070 . PVX_118405 439 SSLNQYK|PC 0.074 . PVX_118405 455 INHVFEK|CL 0.094 . PVX_118405 472 SPEQDSK|YK 0.062 . PVX_118405 474 EQDSKYK|PS 0.064 . PVX_118405 477 SKYKPSK|IF 0.065 . PVX_118405 480 KPSKIFK|KD 0.084 . PVX_118405 481 PSKIFKK|DS 0.159 . ____________________________^_________________

  • Fasta :-

    >PVX_118405 ATGGAAGAGGTACGCAAGAGGGTGGAACGAGGAAAGGAAAAAATTAAACAAATTGGTAAA GAAATCCACCAATTTGATTTAAAAAAGAGTGTAGAAAAAATTTTTGTAAAAAAAGGAAAA GAAAAGAAACTCAGTGACATGTTATTTTTGGTACAATACTCACTGAAATATAAAAATGTG TGCAAGTGGCCGAACTATAATGACCTCTTCGTGATCAATTGTAACATAAATGATAATTTC AAATCTATGCTTCAAAAAAATGGGGGATTTGTTCACCACTATAAAAAGGTCACGCCTGAT GGAGGGGCAGATAGCACCCCCACGATGAACCAAGGCAGGGAAACCACACTCGGGGGTAGC AATCAAAGCGGCACGGCGAATCGCAACGCTGAGGGGGATGCCCCCCAGACAGGAGAGAAG CAAATAGACGCAAATTCGGAGAATGGCTTGTCGAGCAAGACTAACAAACCACGGAGTGGC GCAGACAGGGGAGGGCAAATTTACCCCGAGGGGACACCTTTAACGAAAGGGGAACTGCCA CAGAACTCCCCTTCAGAGAAGCACTCCCCGAATAACCCCCCTCCAGATAACTCCCTGCCA AACAGCGCACTCATAAAAAAGGAAAGCAAATTTGTAACCCACTTTAATGACGACATAAGT CCGTACGACAAAATAAAGTTGCAACTTTTTATGTACTTCGTGTTGAACAATTATAGAGTT AAAATTCTAGTGGACGCCTTATCTGCGTTAAATCGCCCAATTAACGTTATCTACATAAAT TGCCCTAATAATAAAGAGCAGAAGAAAACATTTTTTCAAAAGGTGGGGAGCTTCTTCACC CCCCCGTACAAAGTGGGTGATGTTTTTGTGAATAATAAAAATAATTATCAACCAAAGAGC AAGGAAAATTGCTCGTGCTCGGAATTGTCCCCCATTAGGTATAGTAACAACCCAACCACT GCTCCTTCCAAGGAAAGAAAATCAAATTACGTAGGTGGGTACAACCCTATAAGCAACACC ATTTGGCTGTGTTCAAATAATATTAACAGTTATTATAAGCTCAAATATATACTGACGCAT GAACTTATACATGCCTTTGATTTTGCAAGGGCAAATATAGACATGTATAATTGCCACCAT ATTGCTTGTTCCGAAATAAGAGCCTACAATATGAGCAATCAGTGCAGCTATTTTAACAGC AAGTATTTTTCCCCCGACCATGATGTCTTTACTAATTTTAAAAGCCCCTCAATTAGCGCT ACCCCAAAAAATAAATGCATATATAATAATGTGTATTCGTCTCTCAACCAGTACAAGCCT TGCGCAAACAACACCCATCAGTTTATAAATCACGTCTTCGAGAAATGCCTGCACGATTAC TGGCCCTTCATGTGCTCTCCCGAACAGGACAGCAAGTATAAACCCTCCAAGATTTTTAAG AAGGATTCCTGA
  • Download Fasta

  • Fasta :-

    MEEVRKRVERGKEKIKQIGKEIHQFDLKKSVEKIFVKKGKEKKLSDMLFLVQYSLKYKNV CKWPNYNDLFVINCNINDNFKSMLQKNGGFVHHYKKVTPDGGADSTPTMNQGRETTLGGS NQSGTANRNAEGDAPQTGEKQIDANSENGLSSKTNKPRSGADRGGQIYPEGTPLTKGELP QNSPSEKHSPNNPPPDNSLPNSALIKKESKFVTHFNDDISPYDKIKLQLFMYFVLNNYRV KILVDALSALNRPINVIYINCPNNKEQKKTFFQKVGSFFTPPYKVGDVFVNNKNNYQPKS KENCSCSELSPIRYSNNPTTAPSKERKSNYVGGYNPISNTIWLCSNNINSYYKLKYILTH ELIHAFDFARANIDMYNCHHIACSEIRAYNMSNQCSYFNSKYFSPDHDVFTNFKSPSISA TPKNKCIYNNVYSSLNQYKPCANNTHQFINHVFEKCLHDYWPFMCSPEQDSKYKPSKIFK KDS

    No Results
    No Results
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
PVX_118405T1750.5060.089PVX_118405S1850.5060.036
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
PVX_118405T1750.5060.089PVX_118405S1850.5060.036
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_118405189 SSEKHSPNNP0.994unspPVX_118405189 SSEKHSPNNP0.994unspPVX_118405189 SSEKHSPNNP0.994unspPVX_118405220 SNDDISPYDK0.997unspPVX_118405328 SKERKSNYVG0.993unspPVX_118405159 SNKPRSGADR0.996unspPVX_118405185 SQNSPSEKHS0.99unsp
PVX_118405      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India