PVX_118700 | PST-A protein

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PVX_118700OTHER0.9998930.0000850.000022
No Results

  • Fasta :-

    >PVX_118700 MVERDSYITAENITRTKFDETSTQFDEAVERINGTSVRLDGAPTLDSFYNKDGLLLRTYG WLVKNAIGIIILIHGLNSHVRFSFLRHNVDIVNYDKALLKDENNYYVYKDSWIEHFNKCG YSVYGIDLQGHGQSEGWGNLKVNVKQYDDLVYDVMQYIHEIHDKVSSYGDKSGDSSSSGD ERCEEVPTVSNRNRGTFLSVKEAGEESEPSGKNKGKSSSGKKGDKSSSDKKSDKSSSGKK GDKSSNDKKIDKSSSDKKGDKSSSDKKIDKSSNAKKIDKSSSGKKSDKSLIVQKSDKSSS SKKDYRSSTSQLSDDCSSKHSDGSSSQISDKSPTKRKTNKLLSIADAGGEMIFKKKKKKK ALPTYIIGQSMGGNIALRTLQLLGKSNDERNKRLNIKGCISLSGMISIELMAASPRSYKY SCFYLPFFKLFSCFFPRYRLINNMRYIRYKYMNDVARFDKIRYKKGITSRFGYELLKAMK ILDRDMIYIPKDIPILFIHSKDDTLCYYRGVVSFFNRLKNDNKELHILENMEHMLTIEPG NENVLKKILTWLTNLPNAIRDTKWNFEERGL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_118700.fa Sequence name : PVX_118700 Sequence length : 571 VALUES OF COMPUTED PARAMETERS Coef20 : 3.880 CoefTot : 0.000 ChDiff : 27 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.359 1.600 0.245 0.682 MesoH : -0.701 0.205 -0.371 0.157 MuHd_075 : 5.144 7.670 1.995 3.262 MuHd_095 : 28.328 14.313 5.985 5.494 MuHd_100 : 24.348 10.627 5.547 4.331 MuHd_105 : 19.438 6.790 4.929 2.922 Hmax_075 : -0.000 6.883 -0.637 2.047 Hmax_095 : 4.550 6.300 -0.783 2.223 Hmax_100 : 1.500 4.400 -1.322 1.360 Hmax_105 : 4.550 4.800 -0.678 2.100 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8490 0.1510 DFMC : 0.9394 0.0606
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 571 PVX_118700 MVERDSYITAENITRTKFDETSTQFDEAVERINGTSVRLDGAPTLDSFYNKDGLLLRTYGWLVKNAIGIIILIHGLNSHV 80 RFSFLRHNVDIVNYDKALLKDENNYYVYKDSWIEHFNKCGYSVYGIDLQGHGQSEGWGNLKVNVKQYDDLVYDVMQYIHE 160 IHDKVSSYGDKSGDSSSSGDERCEEVPTVSNRNRGTFLSVKEAGEESEPSGKNKGKSSSGKKGDKSSSDKKSDKSSSGKK 240 GDKSSNDKKIDKSSSDKKGDKSSSDKKIDKSSNAKKIDKSSSGKKSDKSLIVQKSDKSSSSKKDYRSSTSQLSDDCSSKH 320 SDGSSSQISDKSPTKRKTNKLLSIADAGGEMIFKKKKKKKALPTYIIGQSMGGNIALRTLQLLGKSNDERNKRLNIKGCI 400 SLSGMISIELMAASPRSYKYSCFYLPFFKLFSCFFPRYRLINNMRYIRYKYMNDVARFDKIRYKKGITSRFGYELLKAMK 480 ILDRDMIYIPKDIPILFIHSKDDTLCYYRGVVSFFNRLKNDNKELHILENMEHMLTIEPGNENVLKKILTWLTNLPNAIR 560 DTKWNFEERGL 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ........... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_118700 4 ---MVER|DS 0.099 . PVX_118700 15 TAENITR|TK 0.097 . PVX_118700 17 ENITRTK|FD 0.068 . PVX_118700 31 FDEAVER|IN 0.097 . PVX_118700 38 INGTSVR|LD 0.099 . PVX_118700 51 LDSFYNK|DG 0.069 . PVX_118700 57 KDGLLLR|TY 0.090 . PVX_118700 64 TYGWLVK|NA 0.068 . PVX_118700 81 GLNSHVR|FS 0.099 . PVX_118700 86 VRFSFLR|HN 0.099 . PVX_118700 96 DIVNYDK|AL 0.060 . PVX_118700 100 YDKALLK|DE 0.061 . PVX_118700 109 NNYYVYK|DS 0.081 . PVX_118700 118 WIEHFNK|CG 0.062 . PVX_118700 141 EGWGNLK|VN 0.057 . PVX_118700 145 NLKVNVK|QY 0.069 . PVX_118700 164 IHEIHDK|VS 0.076 . PVX_118700 171 VSSYGDK|SG 0.083 . PVX_118700 182 SSSGDER|CE 0.097 . PVX_118700 192 VPTVSNR|NR 0.107 . PVX_118700 194 TVSNRNR|GT 0.140 . PVX_118700 201 GTFLSVK|EA 0.069 . PVX_118700 212 ESEPSGK|NK 0.068 . PVX_118700 214 EPSGKNK|GK 0.109 . PVX_118700 216 SGKNKGK|SS 0.131 . PVX_118700 221 GKSSSGK|KG 0.084 . PVX_118700 222 KSSSGKK|GD 0.101 . PVX_118700 225 SGKKGDK|SS 0.090 . PVX_118700 230 DKSSSDK|KS 0.080 . PVX_118700 231 KSSSDKK|SD 0.151 . PVX_118700 234 SDKKSDK|SS 0.108 . PVX_118700 239 DKSSSGK|KG 0.077 . PVX_118700 240 KSSSGKK|GD 0.109 . PVX_118700 243 SGKKGDK|SS 0.080 . PVX_118700 248 DKSSNDK|KI 0.075 . PVX_118700 249 KSSNDKK|ID 0.099 . PVX_118700 252 NDKKIDK|SS 0.092 . PVX_118700 257 DKSSSDK|KG 0.071 . PVX_118700 258 KSSSDKK|GD 0.110 . PVX_118700 261 SDKKGDK|SS 0.090 . PVX_118700 266 DKSSSDK|KI 0.084 . PVX_118700 267 KSSSDKK|ID 0.096 . PVX_118700 270 SDKKIDK|SS 0.085 . PVX_118700 275 DKSSNAK|KI 0.087 . PVX_118700 276 KSSNAKK|ID 0.106 . PVX_118700 279 NAKKIDK|SS 0.087 . PVX_118700 284 DKSSSGK|KS 0.089 . PVX_118700 285 KSSSGKK|SD 0.168 . PVX_118700 288 SGKKSDK|SL 0.100 . PVX_118700 294 KSLIVQK|SD 0.069 . PVX_118700 297 IVQKSDK|SS 0.092 . PVX_118700 302 DKSSSSK|KD 0.069 . PVX_118700 303 KSSSSKK|DY 0.230 . PVX_118700 306 SSKKDYR|SS 0.205 . PVX_118700 319 SDDCSSK|HS 0.070 . PVX_118700 331 SSQISDK|SP 0.085 . PVX_118700 335 SDKSPTK|RK 0.063 . PVX_118700 336 DKSPTKR|KT 0.278 . PVX_118700 337 KSPTKRK|TN 0.067 . PVX_118700 340 TKRKTNK|LL 0.093 . PVX_118700 354 GGEMIFK|KK 0.057 . PVX_118700 355 GEMIFKK|KK 0.103 . PVX_118700 356 EMIFKKK|KK 0.135 . PVX_118700 357 MIFKKKK|KK 0.103 . PVX_118700 358 IFKKKKK|KK 0.088 . PVX_118700 359 FKKKKKK|KA 0.121 . PVX_118700 360 KKKKKKK|AL 0.185 . PVX_118700 378 GGNIALR|TL 0.083 . PVX_118700 385 TLQLLGK|SN 0.081 . PVX_118700 390 GKSNDER|NK 0.096 . PVX_118700 392 SNDERNK|RL 0.065 . PVX_118700 393 NDERNKR|LN 0.484 . PVX_118700 397 NKRLNIK|GC 0.068 . PVX_118700 416 LMAASPR|SY 0.149 . PVX_118700 419 ASPRSYK|YS 0.192 . PVX_118700 429 FYLPFFK|LF 0.056 . PVX_118700 437 FSCFFPR|YR 0.085 . PVX_118700 439 CFFPRYR|LI 0.077 . PVX_118700 445 RLINNMR|YI 0.109 . PVX_118700 448 NNMRYIR|YK 0.216 . PVX_118700 450 MRYIRYK|YM 0.084 . PVX_118700 457 YMNDVAR|FD 0.104 . PVX_118700 460 DVARFDK|IR 0.131 . PVX_118700 462 ARFDKIR|YK 0.122 . PVX_118700 464 FDKIRYK|KG 0.066 . PVX_118700 465 DKIRYKK|GI 0.333 . PVX_118700 470 KKGITSR|FG 0.111 . PVX_118700 477 FGYELLK|AM 0.057 . PVX_118700 480 ELLKAMK|IL 0.061 . PVX_118700 484 AMKILDR|DM 0.098 . PVX_118700 491 DMIYIPK|DI 0.069 . PVX_118700 501 ILFIHSK|DD 0.065 . PVX_118700 509 DTLCYYR|GV 0.083 . PVX_118700 517 VVSFFNR|LK 0.093 . PVX_118700 519 SFFNRLK|ND 0.068 . PVX_118700 523 RLKNDNK|EL 0.073 . PVX_118700 546 GNENVLK|KI 0.076 . PVX_118700 547 NENVLKK|IL 0.121 . PVX_118700 560 NLPNAIR|DT 0.091 . PVX_118700 563 NAIRDTK|WN 0.119 . PVX_118700 569 KWNFEER|GL 0.120 . ____________________________^_________________

  • Fasta :-

    >PVX_118700 ATGGTAGAGCGCGATTCATATATCACTGCAGAAAATATAACGAGAACGAAGTTTGATGAA ACATCTACGCAGTTTGATGAAGCGGTCGAGCGGATAAATGGAACATCCGTGCGACTAGAT GGAGCACCCACGCTTGATTCTTTTTATAATAAGGACGGTTTATTATTGAGAACATACGGG TGGCTAGTAAAAAATGCTATAGGTATTATAATACTAATACACGGCTTAAATTCGCACGTT AGGTTTTCTTTTTTAAGACATAACGTTGATATAGTAAATTATGACAAGGCTTTGTTAAAA GATGAAAATAATTATTACGTTTACAAGGATAGTTGGATAGAACACTTTAACAAATGTGGA TATTCAGTCTATGGTATAGATTTGCAGGGTCATGGACAATCTGAAGGATGGGGGAATTTA AAGGTTAATGTAAAACAGTATGACGATTTGGTGTATGACGTGATGCAATACATTCATGAA ATTCATGACAAAGTGAGTTCATATGGTGATAAATCGGGAGATTCATCATCATCTGGTGAC GAAAGATGTGAAGAGGTACCCACAGTTAGTAACAGAAACCGTGGCACATTCTTATCTGTC AAGGAAGCAGGTGAGGAATCGGAACCGAGCGGCAAAAATAAAGGCAAATCGTCAAGCGGT AAAAAAGGTGATAAATCGTCAAGCGATAAAAAAAGTGATAAATCGTCAAGCGGAAAAAAA GGTGATAAATCGTCAAACGATAAAAAAATTGATAAATCGTCAAGCGACAAAAAAGGTGAT AAATCGTCAAGCGACAAAAAAATTGATAAATCGTCAAACGCAAAAAAAATTGATAAATCG TCAAGCGGCAAAAAAAGTGATAAATCGTTAATTGTCCAAAAAAGTGATAAATCGTCTAGT AGTAAAAAGGACTATAGATCCTCTACTAGCCAATTGAGTGATGATTGTAGTAGCAAACAT AGTGATGGGTCTAGTAGCCAAATAAGTGATAAATCGCCTACTAAAAGAAAAACTAATAAG TTACTGTCCATTGCCGATGCAGGGGGTGAAATGATATTTAAAAAAAAAAAAAAGAAAAAA GCCCTCCCCACTTATATTATTGGACAATCGATGGGAGGAAATATCGCTTTAAGGACTTTA CAATTACTGGGAAAATCGAATGATGAGAGAAATAAGAGATTAAATATTAAGGGGTGTATA TCATTGTCCGGGATGATTTCCATTGAACTAATGGCAGCATCTCCGCGTTCCTATAAATAT AGTTGCTTCTATTTGCCATTTTTCAAGTTGTTTTCCTGTTTTTTCCCAAGATATCGGCTT ATAAATAATATGCGTTACATAAGGTATAAATATATGAATGATGTGGCTCGGTTCGATAAA ATTCGTTATAAGAAAGGAATAACAAGTAGATTTGGATATGAACTTTTAAAAGCAATGAAA ATTTTAGACAGAGATATGATTTACATCCCCAAGGATATTCCCATTTTGTTTATCCATTCG AAGGATGACACTTTATGTTATTATAGAGGAGTTGTATCATTTTTTAACAGACTAAAGAAT GACAATAAGGAGCTGCACATTTTAGAAAATATGGAACACATGTTGACCATCGAGCCTGGA AATGAAAACGTTTTAAAAAAGATTTTGACTTGGCTCACCAATTTGCCGAACGCAATAAGG GACACGAAATGGAATTTCGAAGAAAGGGGTTTATAA
  • Download Fasta

  • Fasta :-

    MVERDSYITAENITRTKFDETSTQFDEAVERINGTSVRLDGAPTLDSFYNKDGLLLRTYG WLVKNAIGIIILIHGLNSHVRFSFLRHNVDIVNYDKALLKDENNYYVYKDSWIEHFNKCG YSVYGIDLQGHGQSEGWGNLKVNVKQYDDLVYDVMQYIHEIHDKVSSYGDKSGDSSSSGD ERCEEVPTVSNRNRGTFLSVKEAGEESEPSGKNKGKSSSGKKGDKSSSDKKSDKSSSGKK GDKSSNDKKIDKSSSDKKGDKSSSDKKIDKSSNAKKIDKSSSGKKSDKSLIVQKSDKSSS SKKDYRSSTSQLSDDCSSKHSDGSSSQISDKSPTKRKTNKLLSIADAGGEMIFKKKKKKK ALPTYIIGQSMGGNIALRTLQLLGKSNDERNKRLNIKGCISLSGMISIELMAASPRSYKY SCFYLPFFKLFSCFFPRYRLINNMRYIRYKYMNDVARFDKIRYKKGITSRFGYELLKAMK ILDRDMIYIPKDIPILFIHSKDDTLCYYRGVVSFFNRLKNDNKELHILENMEHMLTIEPG NENVLKKILTWLTNLPNAIRDTKWNFEERGL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_118700177 SGDSSSSGDE0.996unspPVX_118700177 SGDSSSSGDE0.996unspPVX_118700177 SGDSSSSGDE0.996unspPVX_118700178 SDSSSSGDER0.991unspPVX_118700199 SGTFLSVKEA0.991unspPVX_118700219 SGKSSSGKKG0.996unspPVX_118700226 SKGDKSSSDK0.997unspPVX_118700228 SDKSSSDKKS0.997unspPVX_118700232 SSDKKSDKSS0.997unspPVX_118700235 SKSDKSSSGK0.992unspPVX_118700237 SDKSSSGKKG0.997unspPVX_118700244 SKGDKSSNDK0.996unspPVX_118700253 SKIDKSSSDK0.997unspPVX_118700255 SDKSSSDKKG0.998unspPVX_118700262 SKGDKSSSDK0.997unspPVX_118700264 SDKSSSDKKI0.996unspPVX_118700282 SDKSSSGKKS0.998unspPVX_118700286 SSGKKSDKSL0.994unspPVX_118700300 SDKSSSSKKD0.995unspPVX_118700301 SKSSSSKKDY0.998unspPVX_118700329 SSSQISDKSP0.994unspPVX_118700343 SNKLLSIADA0.993unspPVX_118700417 SASPRSYKYS0.991unspPVX_118700500 SLFIHSKDDT0.991unspPVX_1187006 SVERDSYITA0.995unspPVX_118700175 SKSGDSSSSG0.994unsp
PVX_118700      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India