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Computed_GO_Component_IDs: GO:0020011
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Computed_GO_Components: apicoplast
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Computed_GO_Function_IDs:
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Computed_GO_Functions:
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Computed_GO_Process_IDs:
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Computed_GO_Processes:
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Curated_GO_Component_IDs:
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Curated_GO_Components:
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Curated_GO_Function_IDs:
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Curated_GO_Functions:
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Curated_GO_Processes:
No Results
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Fasta :-
>PVX_119813
MRLPLTMRLTSPLTMRLALRRTHANTPKVSTLKSMDMPSIRQSVQLSKKKNLKSKALWRN
YLYVVILKLYSNQVTSYVDLMIILKLLSKQLSLEKKVLNFICEKMESHMYKLTIRELSLL
MLLLRKHKFDNLYFLNLVAKSILIKMNKNVSYKDLALITFSLSRGISLTEKVYTSEIFHL
SVVKIHNDLKNLNFHSLTLFFYSYSLYFLHHFEQFNHFFYLTRSFIQVIKKNLFLFNPTD
LMFTFLSAVHVCGAFSNALRSGQCHGARHSPGGQLSQGSAALLSGGPTNNQALTNYSAAN
DQTTSSPVKTPPGGKPTTRNVPSKELHQGNYSKGKAEQQDGSTREEALSNFLTQVKHAIV
EKLQCFKVEEVTNVLFASLDRDFAINGRYFPFLQKDRIHIWDYLRVYVGRGRSCEGDEKR
KEQHTEDHHTERGELTGSRADPPQVASQPTNYLIRVSQAAHQGESFVNPLSEESFLNALS
EEIIYRNEFLTARQILLLLHALRGTNTPFVRLEKILLKRLVCLEKELSFSQAMFVYQYLY
VRTCLFHELRRYAPKVYKREGQKEEVFLLCDGDNGVRQNDQRGDQPTLPSELQRDKDNQV
YYLHDDTSHLKKRRKRDRTKIFLYDHFIFKYPAQVSTEGEEVKKLEEKKNLTQFISLERR
DSFREVNPPTLTQEGENPPPGEAEYQITCFNFYLDVYKIVCLKMVNSLKNERLTPHTTLH
LLDIFKRLNVRDYRMIRYFYKMEKEILFLDNLTLERLLKVLVNFNLYNLLHHLGVHKILQ
FVNFNSVEECVSFLGLLGLLSTRGGEKPFCSLPNECTENAVSYILKNIKHLRSTHQLEQI
QVTPVYNSLPLRYFKLFKNVRSVGGLAQLCAQRRAAKQSHLAWSAEKYQKMASNFVLRSV
DDVHLGKASLGLSGNRSRGSWSRGRMGQPPSGTGRTICLSEYRDIQEEIFRDLHTIFSPT
VEVYKNVSVSNYTFPLAINLLTLGGGAPSSAGSAGASGAADLAVSADSIDSADSTNIAHS
AHLADVAKTHPLVTQRRSDGPSGPRELNRKNTLLVDILYGHDFYYSLSGAKEKKLKKHNI
FVCYYGMHAKKANKKLVNYKKHAILKCIKKNGYNYICIDAKTYVKNKKKNRDNHLNKGYL
TSLILHLVKRKRAIPLGTNRRVSGKNRPATSRRQRRRGSLLRAKRNTHSAEELASHVETN
KHLRKMHTGGEKRGLPGTNHLDKLRHMFQLG
- Download Fasta
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MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/PVX_119813.fa
Sequence name : PVX_119813
Sequence length : 1231
VALUES OF COMPUTED PARAMETERS
Coef20 : 5.185
CoefTot : 0.277
ChDiff : 73
ZoneTo : 93
KR : 17
DE : 2
CleavSite : 43
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.535 1.382 0.167 0.572
MesoH : 0.170 0.560 -0.213 0.323
MuHd_075 : 38.951 25.224 11.174 9.678
MuHd_095 : 38.792 19.511 10.071 6.734
MuHd_100 : 28.904 16.811 7.212 5.772
MuHd_105 : 27.331 16.191 7.784 5.541
Hmax_075 : 6.913 9.975 0.233 4.048
Hmax_095 : 14.875 18.375 -0.183 6.353
Hmax_100 : 13.400 8.500 -0.517 3.180
Hmax_105 : 4.317 20.000 2.221 6.400
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.0157 0.9843
DFMC : 0.0053 0.9947
This protein is probably imported in mitochondria.
f(Ser) = 0.1183 f(Arg) = 0.0753 CMi = 0.67443
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
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Fasta :-
>PVX_119813
ATGCGGCTGCCACTCACCATGCGGCTGACCTCGCCGCTGACCATGCGGCTCGCGCTGAGG
AGGACCCACGCGAACACCCCAAAAGTGAGCACCCTGAAGAGCATGGACATGCCCAGCATC
CGCCAAAGTGTCCAGCTGAGCAAAAAAAAAAACCTCAAGTCGAAAGCCCTCTGGAGGAAC
TACCTCTACGTAGTGATTCTCAAGCTATACAGCAACCAAGTAACCAGCTACGTAGATCTT
ATGATCATCTTGAAGCTGCTAAGCAAGCAACTCTCCCTGGAGAAAAAAGTGCTAAATTTT
ATCTGCGAAAAAATGGAGAGTCACATGTACAAGCTGACCATCAGGGAGTTAAGTCTCCTC
ATGCTCCTCCTCAGGAAGCACAAATTTGACAACCTGTATTTCTTAAACCTGGTGGCGAAA
TCTATACTAATCAAAATGAATAAGAATGTGTCTTATAAGGACCTCGCGTTGATTACCTTC
AGTCTGTCCAGGGGCATTTCCCTCACCGAGAAGGTCTATACGAGTGAAATCTTCCACTTG
AGCGTTGTAAAAATACACAACGATTTGAAGAATCTAAATTTCCACTCCCTCACTTTGTTC
TTCTACTCCTACAGCCTCTATTTTCTCCACCACTTTGAGCAGTTTAACCATTTTTTTTAC
CTGACCAGGAGTTTCATCCAAGTGATAAAAAAAAATCTCTTTCTCTTCAACCCCACCGAT
TTGATGTTCACTTTTTTGTCCGCCGTGCATGTTTGCGGCGCTTTTAGTAACGCCCTCAGG
AGTGGGCAGTGCCACGGGGCGAGGCATTCTCCAGGTGGGCAGCTCTCACAGGGCAGTGCA
GCCCTACTCAGTGGAGGACCTACGAATAACCAGGCGTTGACCAACTATAGTGCTGCCAAT
GACCAGACAACATCTTCACCAGTGAAGACACCTCCAGGGGGGAAACCCACCACGAGGAAT
GTTCCTTCCAAGGAGCTTCATCAGGGGAATTACTCCAAGGGGAAAGCGGAGCAACAGGAC
GGATCCACCCGCGAAGAGGCACTCTCCAATTTTCTAACCCAAGTGAAGCACGCCATTGTG
GAGAAGCTACAATGCTTCAAAGTGGAGGAAGTGACAAACGTGCTGTTTGCCTCCCTAGAC
AGAGACTTCGCCATCAACGGGAGGTACTTCCCCTTTCTGCAGAAGGATAGGATACACATT
TGGGATTACCTGCGTGTGTACGTGGGGAGGGGGCGGAGCTGCGAGGGGGATGAGAAGCGC
AAAGAGCAGCACACGGAAGATCATCACACTGAACGGGGAGAACTCACAGGCAGTCGCGCC
GACCCCCCCCAGGTGGCATCCCAGCCGACGAACTACCTCATCAGAGTGAGCCAAGCCGCT
CACCAGGGGGAATCCTTCGTCAACCCACTGTCGGAGGAATCCTTCCTCAACGCACTGTCG
GAGGAAATAATTTACCGCAACGAATTTTTGACGGCGCGCCAGATCCTCCTGCTGCTGCAC
GCCCTAAGAGGGACGAACACCCCATTTGTACGGTTGGAGAAAATCCTGCTGAAGCGATTG
GTGTGCTTGGAAAAGGAACTATCGTTCAGCCAAGCCATGTTCGTCTACCAGTACCTCTAC
GTCAGGACGTGTCTCTTCCACGAGTTAAGGAGGTATGCCCCAAAAGTGTATAAACGGGAG
GGGCAGAAAGAAGAGGTGTTCCTCCTGTGCGATGGTGACAATGGGGTGAGGCAAAATGAC
CAAAGGGGAGACCAACCCACCCTGCCAAGTGAACTCCAAAGGGATAAAGACAACCAGGTG
TACTACCTCCACGATGATACATCCCACTTGAAGAAGAGGAGAAAAAGGGACAGAACAAAA
ATATTTCTCTATGATCACTTTATTTTTAAGTACCCTGCACAGGTCAGCACAGAAGGGGAA
GAAGTCAAAAAATTAGAAGAAAAAAAAAACCTAACACAGTTCATTAGTCTGGAAAGGAGA
GACTCCTTTAGGGAAGTAAATCCTCCAACCCTAACGCAAGAAGGGGAGAACCCCCCCCCT
GGAGAGGCCGAATACCAAATCACGTGCTTCAATTTCTACCTAGATGTGTACAAAATCGTT
TGCCTAAAAATGGTAAACTCTCTAAAGAATGAAAGACTAACCCCCCACACAACCCTTCAC
CTTCTAGACATCTTCAAAAGGTTAAACGTAAGGGACTACAGAATGATCAGGTACTTTTAC
AAAATGGAAAAAGAAATTTTATTTTTGGACAATCTCACCCTGGAGAGGCTCCTAAAAGTG
CTTGTTAATTTTAACCTCTACAATTTGTTGCATCATTTGGGCGTTCATAAAATTTTGCAA
TTTGTTAACTTCAACTCGGTGGAGGAATGCGTCTCCTTTTTGGGTCTCCTCGGCTTGCTC
TCCACTCGGGGGGGGGAGAAGCCCTTCTGCAGTTTGCCAAACGAATGCACTGAAAATGCC
GTCAGTTATATTTTAAAAAATATTAAACACTTGAGGAGTACCCACCAGTTGGAGCAGATT
CAGGTAACCCCCGTGTACAATTCGCTGCCCCTCAGATACTTCAAGCTGTTCAAAAATGTG
CGCTCTGTGGGGGGCCTGGCTCAGCTTTGCGCCCAACGGAGAGCGGCGAAGCAAAGTCAC
CTTGCCTGGTCAGCTGAAAAGTATCAAAAAATGGCGAGCAACTTTGTGCTGCGTTCCGTG
GATGACGTCCACTTGGGGAAAGCGTCACTTGGGTTGAGCGGCAACCGATCACGCGGCAGC
TGGTCGCGTGGCCGAATGGGGCAACCCCCAAGTGGCACCGGTCGGACGATTTGCCTCAGC
GAGTACAGAGACATCCAGGAGGAAATATTTCGAGACCTGCACACAATTTTTTCGCCGACG
GTTGAAGTTTACAAAAACGTGAGCGTGTCGAATTATACGTTTCCGCTGGCTATTAATTTG
CTGACGCTGGGGGGGGGAGCGCCTTCCTCGGCTGGCTCGGCTGGAGCGTCTGGAGCGGCC
GACTTGGCTGTCTCAGCTGACTCGATCGACTCGGCTGACTCCACTAACATCGCTCACTCC
GCTCACTTGGCCGACGTGGCGAAGACGCACCCGCTCGTTACCCAGCGCCGAAGCGATGGA
CCCAGCGGGCCACGCGAACTGAACAGGAAAAACACCCTCCTCGTGGACATCCTGTACGGC
CACGACTTTTACTATTCCCTGAGCGGAGCGAAAGAGAAAAAGCTGAAGAAGCATAACATC
TTCGTGTGCTACTATGGCATGCATGCGAAGAAGGCGAATAAAAAATTGGTCAACTATAAG
AAGCACGCCATTTTGAAGTGCATCAAAAAAAATGGGTACAATTACATTTGCATTGATGCG
AAGACGTATGTAAAAAACAAAAAAAAAAACAGAGACAATCACCTGAATAAGGGTTACCTA
ACTAGTTTGATCCTCCATTTGGTTAAGAGGAAGAGGGCAATTCCCCTGGGCACAAACAGA
AGGGTCAGTGGGAAAAACAGACCAGCTACATCGCGGCGACAGCGCAGAAGAGGGTCACTT
TTGCGAGCGAAAAGGAACACGCACAGCGCTGAAGAGCTGGCCTCCCACGTGGAGACGAAC
AAACACCTCCGCAAGATGCACACTGGGGGAGAAAAGAGGGGCCTCCCCGGGACCAACCAT
CTGGACAAGCTACGGCACATGTTCCAGCTTGGGTAG
- Download Fasta
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ID | Site | Position | Gscore | Iscore |
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PVX_119813 | T | 310 | 0.515 | 0.319 |
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ID | Site | Position | Gscore | Iscore |
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PVX_119813 | T | 310 | 0.515 | 0.319 |
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ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method |
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PVX_119813 | 342 S | QQDGSTREE | 0.994 | unsp | PVX_119813 | 342 S | QQDGSTREE | 0.994 | unsp | PVX_119813 | 342 S | QQDGSTREE | 0.994 | unsp | PVX_119813 | 662 S | ERRDSFREV | 0.996 | unsp | PVX_119813 | 920 S | RSRGSWSRG | 0.997 | unsp | PVX_119813 | 1163 S | NRRVSGKNR | 0.998 | unsp | PVX_119813 | 1179 S | RRRGSLLRA | 0.994 | unsp | PVX_119813 | 1189 S | RNTHSAEEL | 0.994 | unsp | PVX_119813 | 151 S | NKNVSYKDL | 0.998 | unsp | PVX_119813 | 270 S | GARHSPGGQ | 0.99 | unsp |