PVX_121900 | PST-A protein

UniProt_ID: A5JZ05

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs:
Computed_GO_Functions:
Computed_GO_Process_IDs:
Computed_GO_Processes:
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	PVX_121900	OTHER	0.999966	0.000019	0.000015

No Results

Fasta :-
>PVX_121900 MAGNIYYDEEIITPSTDRLDGKPTLGSFFNKDGLLMRTFGWLVRNAVGVIVLVHGLNSHA RLTFLRHNVEIVDNSKAILKDENNYYVYKNSWIEHFNNNGYSVYALDLQGHGLSDGWKNL SLNINNFDDLVLDVIQFLNIINDELCLKDKENDSKATWYNVEGCAALSDGDSEGNSDECS KNVGGNNDPESDNEPKRDSDPSSDNVPQSDNEPSSDSDPQSDNEPSSDSDPKSDNEPSSD KEPQSDNEPKSDNEPKSDNEPSSDSDPKSDNEPSSDKEPQSDNEPKSDNEPKSDNEPKSD NEPSSHNEPSSHNEPSSHNEPKSDNEPQSDNEPQSDSEPCCSKECKNNKCSSLPIFLVGQ SMGGNIVLRTLQLLEKTQNDGKGKLNIQGCISLSSMISFQKIASPRSYKYKYFYLPFSRL ISGFFPTSRVVTKMEFQKYPYLNDLANFDKIRSKNGITVKYWYELLKATSNLESDMEFIP KDIPILLIHSKDDIFCYYKGALSFFNRLNNDNKELITLENMEHGLTAEPGNEKVLENIVD WIENLHTKKEMAQPLEAT
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_121900.fa Sequence name : PVX_121900 Sequence length : 558 VALUES OF COMPUTED PARAMETERS Coef20 : 3.212 CoefTot : -0.557 ChDiff : -44 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.294 1.494 0.126 0.571 MesoH : -0.628 0.165 -0.403 0.143 MuHd_075 : 35.418 19.881 8.823 6.974 MuHd_095 : 16.234 11.820 3.745 3.032 MuHd_100 : 19.665 16.003 4.746 3.930 MuHd_105 : 18.218 16.008 5.217 3.446 Hmax_075 : 1.575 6.183 -0.403 3.243 Hmax_095 : -2.600 3.762 -2.245 2.030 Hmax_100 : 5.400 7.800 -0.263 3.220 Hmax_105 : 1.633 6.767 -0.508 3.372 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9829 0.0171 DFMC : 0.9673 0.0327

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 558 PVX_121900 MAGNIYYDEEIITPSTDRLDGKPTLGSFFNKDGLLMRTFGWLVRNAVGVIVLVHGLNSHARLTFLRHNVEIVDNSKAILK 80 DENNYYVYKNSWIEHFNNNGYSVYALDLQGHGLSDGWKNLSLNINNFDDLVLDVIQFLNIINDELCLKDKENDSKATWYN 160 VEGCAALSDGDSEGNSDECSKNVGGNNDPESDNEPKRDSDPSSDNVPQSDNEPSSDSDPQSDNEPSSDSDPKSDNEPSSD 240 KEPQSDNEPKSDNEPKSDNEPSSDSDPKSDNEPSSDKEPQSDNEPKSDNEPKSDNEPKSDNEPSSHNEPSSHNEPSSHNE 320 PKSDNEPQSDNEPQSDSEPCCSKECKNNKCSSLPIFLVGQSMGGNIVLRTLQLLEKTQNDGKGKLNIQGCISLSSMISFQ 400 KIASPRSYKYKYFYLPFSRLISGFFPTSRVVTKMEFQKYPYLNDLANFDKIRSKNGITVKYWYELLKATSNLESDMEFIP 480 KDIPILLIHSKDDIFCYYKGALSFFNRLNNDNKELITLENMEHGLTAEPGNEKVLENIVDWIENLHTKKEMAQPLEAT 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .............................................................................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_121900 18 ITPSTDR|LD 0.078 . PVX_121900 22 TDRLDGK|PT 0.075 . PVX_121900 31 LGSFFNK|DG 0.075 . PVX_121900 37 KDGLLMR|TF 0.099 . PVX_121900 44 TFGWLVR|NA 0.098 . PVX_121900 61 GLNSHAR|LT 0.107 . PVX_121900 66 ARLTFLR|HN 0.098 . PVX_121900 76 EIVDNSK|AI 0.061 . PVX_121900 80 NSKAILK|DE 0.061 . PVX_121900 89 NNYYVYK|NS 0.067 . PVX_121900 118 GLSDGWK|NL 0.079 . PVX_121900 148 NDELCLK|DK 0.061 . PVX_121900 150 ELCLKDK|EN 0.067 . PVX_121900 155 DKENDSK|AT 0.071 . PVX_121900 181 NSDECSK|NV 0.081 . PVX_121900 196 ESDNEPK|RD 0.060 . PVX_121900 197 SDNEPKR|DS 0.418 . PVX_121900 232 SSDSDPK|SD 0.074 . PVX_121900 241 NEPSSDK|EP 0.053 . PVX_121900 250 QSDNEPK|SD 0.084 . PVX_121900 256 KSDNEPK|SD 0.081 . PVX_121900 268 SSDSDPK|SD 0.074 . PVX_121900 277 NEPSSDK|EP 0.053 . PVX_121900 286 QSDNEPK|SD 0.084 . PVX_121900 292 KSDNEPK|SD 0.087 . PVX_121900 298 KSDNEPK|SD 0.082 . PVX_121900 322 SSHNEPK|SD 0.125 . PVX_121900 343 SEPCCSK|EC 0.056 . PVX_121900 346 CCSKECK|NN 0.065 . PVX_121900 349 KECKNNK|CS 0.063 . PVX_121900 369 GGNIVLR|TL 0.103 . PVX_121900 376 TLQLLEK|TQ 0.062 . PVX_121900 382 KTQNDGK|GK 0.063 . PVX_121900 384 QNDGKGK|LN 0.070 . PVX_121900 401 SMISFQK|IA 0.066 . PVX_121900 406 QKIASPR|SY 0.154 . PVX_121900 409 ASPRSYK|YK 0.172 . PVX_121900 411 PRSYKYK|YF 0.090 . PVX_121900 419 FYLPFSR|LI 0.094 . PVX_121900 429 GFFPTSR|VV 0.144 . PVX_121900 433 TSRVVTK|ME 0.093 . PVX_121900 438 TKMEFQK|YP 0.065 . PVX_121900 450 DLANFDK|IR 0.071 . PVX_121900 452 ANFDKIR|SK 0.135 . PVX_121900 454 FDKIRSK|NG 0.062 . PVX_121900 460 KNGITVK|YW 0.079 . PVX_121900 467 YWYELLK|AT 0.076 . PVX_121900 481 DMEFIPK|DI 0.077 . PVX_121900 491 ILLIHSK|DD 0.063 . PVX_121900 499 DIFCYYK|GA 0.059 . PVX_121900 507 ALSFFNR|LN 0.101 . PVX_121900 513 RLNNDNK|EL 0.081 . PVX_121900 533 AEPGNEK|VL 0.062 . PVX_121900 548 IENLHTK|KE 0.066 . PVX_121900 549 ENLHTKK|EM 0.087 . ____________________________^_________________

Fasta :-
>PVX_121900 GTATGCCCATTTGCCAATTTTAACCGTACATGTATTTTTTTTGTTTATCTACATATGTTC TTATAACCGCGTTTTAAATTTTTCAATTTTTTTTTAATGCTTTGAAATGGATTTGCATTA TATGTTGAGTTATATTCCTATTTTTGATTAAGTATAATTTTACTTTTTTTTGGGGGGATT TTTTTTCATATTTAATTACATGAAATAGAAAGGGCTAGAGGGATTAAAAGTAAAAGAGCG GTTTGTTTTGAATAATTGGAAGTTATTCATTCGTGCGAAAAAGAGCATACTAAGTATATA GGTATGTACTTCTTTTCATTTTCGATGTTGTGAATTAGTTTTCTTTTTATTTTTATAAAA AGAATGGCTGGAAATATTTACTATGACGAAGAGATCATAACCCCATCTACTGATAGACTA GACGGGAAACCAACACTTGGTTCTTTTTTTAATAAGGATGGTTTATTAATGAGAACGTTT GGATGGTTGGTTCGAAATGCTGTAGGTGTTATAGTATTGGTTCATGGTCTAAATTCACAT GCAAGGTTAACCTTTTTAAGGCATAATGTTGAAATAGTGGATAACTCTAAGGCTATATTA AAAGATGAAAACAATTATTACGTGTACAAAAATAGCTGGATAGAACATTTCAATAATAAT GGGTATTCCGTGTATGCCTTAGATTTACAAGGACACGGGCTGTCCGATGGGTGGAAAAAC TTAAGTCTTAATATTAACAACTTTGATGATTTAGTGCTTGACGTAATACAATTTCTTAAT ATAATTAATGATGAATTATGTTTAAAGGATAAAGAAAATGATTCCAAGGCAACTTGGTAT AACGTTGAGGGTTGTGCTGCACTAAGTGATGGTGACAGTGAAGGTAATAGTGATGAATGT AGCAAAAATGTGGGGGGTAATAATGACCCGGAAAGCGATAATGAACCCAAAAGAGATAGC GATCCCAGCAGCGACAACGTTCCCCAAAGCGATAACGAACCCAGCAGCGATAGCGATCCC CAAAGCGATAATGAACCCAGCAGCGATAGCGATCCCAAAAGCGATAACGAACCCAGTAGC GATAAAGAACCCCAAAGCGATAATGAACCCAAAAGTGATAATGAACCCAAAAGTGATAAT GAACCCAGCAGCGATAGCGATCCCAAAAGCGATAACGAACCCAGTAGCGATAAAGAACCC CAAAGCGATAATGAACCCAAAAGTGATAATGAACCCAAAAGTGATAATGAACCCAAAAGT GATAACGAACCCAGCAGCCATAACGAACCCAGCAGCCATAACGAACCCAGCAGCCATAAC GAACCCAAAAGCGATAATGAACCCCAAAGCGATAACGAACCACAAAGCGATAGCGAACCC TGCTGTAGTAAAGAATGTAAGAATAATAAATGTTCTTCACTTCCAATATTCTTAGTCGGC CAATCAATGGGAGGAAATATTGTTTTAAGAACATTACAACTGTTAGAGAAGACACAAAAC GATGGGAAAGGAAAACTAAACATTCAAGGATGTATCTCATTATCCAGTATGATTTCTTTT CAGAAAATAGCTTCACCACGTTCATATAAATATAAATATTTTTATTTACCATTTTCAAGA TTAATCAGTGGCTTCTTTCCAACATCAAGAGTGGTTACAAAAATGGAATTTCAAAAATAT CCCTATCTTAATGATCTTGCTAATTTTGATAAAATTCGATCCAAAAATGGGATAACCGTA AAATATTGGTATGAACTTCTAAAAGCAACGAGTAACTTAGAGAGTGATATGGAATTTATC CCCAAAGATATTCCCATATTGTTAATTCATTCCAAAGATGATATTTTTTGTTATTACAAA GGTGCATTATCATTTTTTAATAGATTAAATAATGATAATAAAGAATTGATTACATTAGAA AATATGGAGCACGGGTTGACCGCGGAGCCTGGGAACGAAAAGGTCTTAGAAAACATCGTA GATTGGATTGAAAATTTACACACAAAAAAAGAAATGGCCCAACCTTTAGAGGCAACATAA
Download Fasta

Fasta :-

MAGNIYYDEEIITPSTDRLDGKPTLGSFFNKDGLLMRTFGWLVRNAVGVIVLVHGLNSHA RLTFLRHNVEIVDNSKAILKDENNYYVYKNSWIEHFNNNGYSVYALDLQGHGLSDGWKNL SLNINNFDDLVLDVIQFLNIINDELCLKDKENDSKATWYNVEGCAALSDGDSEGNSDECS KNVGGNNDPESDNEPKRDSDPSSDNVPQSDNEPSSDSDPQSDNEPSSDSDPKSDNEPSSD KEPQSDNEPKSDNEPKSDNEPSSDSDPKSDNEPSSDKEPQSDNEPKSDNEPKSDNEPKSD NEPSSHNEPSSHNEPSSHNEPKSDNEPQSDNEPQSDSEPCCSKECKNNKCSSLPIFLVGQ SMGGNIVLRTLQLLEKTQNDGKGKLNIQGCISLSSMISFQKIASPRSYKYKYFYLPFSRL ISGFFPTSRVVTKMEFQKYPYLNDLANFDKIRSKNGITVKYWYELLKATSNLESDMEFIP KDIPILLIHSKDDIFCYYKGALSFFNRLNNDNKELITLENMEHGLTAEPGNEKVLENIVD WIENLHTKKEMAQPLEAT

Haloperoxidase

No Results

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	PVX_121900	S	214	0.541	0.069	PVX_121900	S	227	0.533	0.073	PVX_121900	S	229	0.531	0.022	PVX_121900	S	226	0.514	0.069	PVX_121900	S	215	0.510	0.073	PVX_121900	S	221	0.510	0.057	PVX_121900	S	217	0.508	0.020	PVX_121900	T	558	0.501	0.044

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	PVX_121900	S	214	0.541	0.069	PVX_121900	S	227	0.533	0.073	PVX_121900	S	229	0.531	0.022	PVX_121900	S	226	0.514	0.069	PVX_121900	S	215	0.510	0.073	PVX_121900	S	221	0.510	0.057	PVX_121900	S	217	0.508	0.020	PVX_121900	T	558	0.501	0.044

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	PVX_121900	199 S	PKRDSDPSS	0.995	unsp	PVX_121900	199 S	PKRDSDPSS	0.995	unsp	PVX_121900	199 S	PKRDSDPSS	0.995	unsp	PVX_121900	215 S	NEPSSDSDP	0.997	unsp	PVX_121900	227 S	NEPSSDSDP	0.998	unsp	PVX_121900	233 S	SDPKSDNEP	0.994	unsp	PVX_121900	239 S	NEPSSDKEP	0.998	unsp	PVX_121900	245 S	KEPQSDNEP	0.993	unsp	PVX_121900	251 S	NEPKSDNEP	0.996	unsp	PVX_121900	257 S	NEPKSDNEP	0.995	unsp	PVX_121900	263 S	NEPSSDSDP	0.998	unsp	PVX_121900	269 S	SDPKSDNEP	0.994	unsp	PVX_121900	275 S	NEPSSDKEP	0.998	unsp	PVX_121900	281 S	KEPQSDNEP	0.993	unsp	PVX_121900	287 S	NEPKSDNEP	0.996	unsp	PVX_121900	293 S	NEPKSDNEP	0.996	unsp	PVX_121900	299 S	NEPKSDNEP	0.995	unsp	PVX_121900	305 S	NEPSSHNEP	0.994	unsp	PVX_121900	335 S	NEPQSDSEP	0.995	unsp	PVX_121900	404 S	QKIASPRSY	0.992	unsp	PVX_121900	168 S	CAALSDGDS	0.995	unsp	PVX_121900	176 S	SEGNSDECS	0.993	unsp

PVX_121900

PVX_121900 | PST-A protein

ID's

UniProt_ID: A5JZ05

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs:

Computed_GO_Functions:

Computed_GO_Process_IDs:

Computed_GO_Processes:

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Haloperoxidase

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India