PVX_122770 | conserved protein, unknown function

UniProt_ID: A5JZH9

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:1990380 GO:0004843
Computed_GO_Functions: Lys48-specific deubiquitinase activity thiol-dependent ubiquitin-specific protease activity
Computed_GO_Process_IDs:
Computed_GO_Processes:
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	PVX_122770	OTHER	0.999936	0.000054	0.000010

No Results

Fasta :-
>PVX_122770 MTTMIKLHYDEKNDEEENMIIRCADYETFKSYVLKKYDKIYEIVNYENENINYYSVKWIN FINRRVPILLQNKSGPCPLLCITNILLLRNQLQIDKKIKKISQSFLESKIMNILLESNRK NVTDNTASCNYRKNIIECVDILPQLKYGLDVNCKFTNIHSFEYTKGLCIFDMLNIPLYHG WVISSDDVMFYSYLKDYSYNVIINKIVRYNEYYERKKKKNADESSNEKTTILYQLEDVKE EKRDDCDLGKPCERDALMDGPTNNPGAASNSDPKGIPNDAAHELAKGTSKSTERNDKKKS INGIPIFPDDLDLDLDQISEENFKTTSFQDSSSVHVSTVSPLDADTAKKKNPNFGKKNTS ADACSSRRRTHSNVINLKQTCSIDLEKGANKYSVETGRKSDGFFIKEGKTPSNLAFPAKK SNANRNTSLGGNANISTLANVVSPISSDNSSGDVNVVSTPKFPEDPLPTTSTSLIPIGYS SEGNTQGRSKKSILDEKAIRNNELFMESNKIASLTSETANADIADNYTENSENFIMKNYN TDINLTPYEIHEALIISEFLETYKTQLTLVGLKLLRENLNPNQLVAFFRNNHFNTLFKYE NKLFLLAADISFLHLSCTWELFDNVDNDTSYYDNNFRCISNQKNLENNLNHSIIYLKNYD RASAKNNTHCVKSNTSLSNSKKKKKKCTFM
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_122770.fa Sequence name : PVX_122770 Sequence length : 690 VALUES OF COMPUTED PARAMETERS Coef20 : 2.929 CoefTot : -0.387 ChDiff : 1 ZoneTo : 9 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.282 1.488 0.094 0.607 MesoH : -0.629 0.264 -0.404 0.237 MuHd_075 : 14.069 6.315 3.966 2.269 MuHd_095 : 17.249 8.977 2.816 2.919 MuHd_100 : 15.684 8.402 2.271 2.792 MuHd_105 : 10.389 6.523 0.869 2.448 Hmax_075 : -15.167 -6.300 -6.484 -0.187 Hmax_095 : -10.800 -3.600 -6.770 0.300 Hmax_100 : -13.000 -5.800 -6.788 -0.280 Hmax_105 : -13.000 -6.100 -6.989 -0.390 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9890 0.0110 DFMC : 0.9835 0.0165

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 690 PVX_122770 MTTMIKLHYDEKNDEEENMIIRCADYETFKSYVLKKYDKIYEIVNYENENINYYSVKWINFINRRVPILLQNKSGPCPLL 80 CITNILLLRNQLQIDKKIKKISQSFLESKIMNILLESNRKNVTDNTASCNYRKNIIECVDILPQLKYGLDVNCKFTNIHS 160 FEYTKGLCIFDMLNIPLYHGWVISSDDVMFYSYLKDYSYNVIINKIVRYNEYYERKKKKNADESSNEKTTILYQLEDVKE 240 EKRDDCDLGKPCERDALMDGPTNNPGAASNSDPKGIPNDAAHELAKGTSKSTERNDKKKSINGIPIFPDDLDLDLDQISE 320 ENFKTTSFQDSSSVHVSTVSPLDADTAKKKNPNFGKKNTSADACSSRRRTHSNVINLKQTCSIDLEKGANKYSVETGRKS 400 DGFFIKEGKTPSNLAFPAKKSNANRNTSLGGNANISTLANVVSPISSDNSSGDVNVVSTPKFPEDPLPTTSTSLIPIGYS 480 SEGNTQGRSKKSILDEKAIRNNELFMESNKIASLTSETANADIADNYTENSENFIMKNYNTDINLTPYEIHEALIISEFL 560 ETYKTQLTLVGLKLLRENLNPNQLVAFFRNNHFNTLFKYENKLFLLAADISFLHLSCTWELFDNVDNDTSYYDNNFRCIS 640 NQKNLENNLNHSIIYLKNYDRASAKNNTHCVKSNTSLSNSKKKKKKCTFM 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ..........P..................................................................... 560 ................................................................................ 640 .................................................. 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PVX_122770 6 -MTTMIK|LH 0.056 . PVX_122770 12 KLHYDEK|ND 0.066 . PVX_122770 22 EENMIIR|CA 0.108 . PVX_122770 30 ADYETFK|SY 0.066 . PVX_122770 35 FKSYVLK|KY 0.098 . PVX_122770 36 KSYVLKK|YD 0.143 . PVX_122770 39 VLKKYDK|IY 0.064 . PVX_122770 57 INYYSVK|WI 0.081 . PVX_122770 64 WINFINR|RV 0.119 . PVX_122770 65 INFINRR|VP 0.089 . PVX_122770 73 PILLQNK|SG 0.058 . PVX_122770 89 TNILLLR|NQ 0.077 . PVX_122770 96 NQLQIDK|KI 0.057 . PVX_122770 97 QLQIDKK|IK 0.095 . PVX_122770 99 QIDKKIK|KI 0.082 . PVX_122770 100 IDKKIKK|IS 0.095 . PVX_122770 109 QSFLESK|IM 0.064 . PVX_122770 119 ILLESNR|KN 0.070 . PVX_122770 120 LLESNRK|NV 0.098 . PVX_122770 132 TASCNYR|KN 0.109 . PVX_122770 133 ASCNYRK|NI 0.094 . PVX_122770 146 DILPQLK|YG 0.057 . PVX_122770 154 GLDVNCK|FT 0.066 . PVX_122770 165 HSFEYTK|GL 0.064 . PVX_122770 195 MFYSYLK|DY 0.061 . PVX_122770 205 YNVIINK|IV 0.073 . PVX_122770 208 IINKIVR|YN 0.125 . PVX_122770 215 YNEYYER|KK 0.074 . PVX_122770 216 NEYYERK|KK 0.079 . PVX_122770 217 EYYERKK|KK 0.086 . PVX_122770 218 YYERKKK|KN 0.222 . PVX_122770 219 YERKKKK|NA 0.206 . PVX_122770 228 DESSNEK|TT 0.059 . PVX_122770 239 YQLEDVK|EE 0.052 . PVX_122770 242 EDVKEEK|RD 0.059 . PVX_122770 243 DVKEEKR|DD 0.176 . PVX_122770 250 DDCDLGK|PC 0.062 . PVX_122770 254 LGKPCER|DA 0.106 . PVX_122770 274 ASNSDPK|GI 0.069 . PVX_122770 286 AAHELAK|GT 0.088 . PVX_122770 290 LAKGTSK|ST 0.085 . PVX_122770 294 TSKSTER|ND 0.079 . PVX_122770 297 STERNDK|KK 0.123 . PVX_122770 298 TERNDKK|KS 0.135 . PVX_122770 299 ERNDKKK|SI 0.303 . PVX_122770 324 ISEENFK|TT 0.065 . PVX_122770 348 LDADTAK|KK 0.072 . PVX_122770 349 DADTAKK|KN 0.073 . PVX_122770 350 ADTAKKK|NP 0.090 . PVX_122770 356 KNPNFGK|KN 0.068 . PVX_122770 357 NPNFGKK|NT 0.135 . PVX_122770 367 ADACSSR|RR 0.083 . PVX_122770 368 DACSSRR|RT 0.119 . PVX_122770 369 ACSSRRR|TH 0.174 . PVX_122770 378 SNVINLK|QT 0.065 . PVX_122770 387 CSIDLEK|GA 0.067 . PVX_122770 391 LEKGANK|YS 0.061 . PVX_122770 398 YSVETGR|KS 0.092 . PVX_122770 399 SVETGRK|SD 0.098 . PVX_122770 406 SDGFFIK|EG 0.061 . PVX_122770 409 FFIKEGK|TP 0.055 . PVX_122770 419 NLAFPAK|KS 0.083 . PVX_122770 420 LAFPAKK|SN 0.129 . PVX_122770 425 KKSNANR|NT 0.169 . PVX_122770 461 NVVSTPK|FP 0.070 . PVX_122770 488 EGNTQGR|SK 0.157 . PVX_122770 490 NTQGRSK|KS 0.063 . PVX_122770 491 TQGRSKK|SI 0.641 *ProP* PVX_122770 497 KSILDEK|AI 0.069 . PVX_122770 500 LDEKAIR|NN 0.080 . PVX_122770 510 LFMESNK|IA 0.063 . PVX_122770 537 SENFIMK|NY 0.077 . PVX_122770 564 EFLETYK|TQ 0.053 . PVX_122770 573 LTLVGLK|LL 0.055 . PVX_122770 576 VGLKLLR|EN 0.061 . PVX_122770 589 QLVAFFR|NN 0.089 . PVX_122770 598 HFNTLFK|YE 0.064 . PVX_122770 602 LFKYENK|LF 0.056 . PVX_122770 637 YYDNNFR|CI 0.090 . PVX_122770 643 RCISNQK|NL 0.069 . PVX_122770 657 HSIIYLK|NY 0.059 . PVX_122770 661 YLKNYDR|AS 0.083 . PVX_122770 665 YDRASAK|NN 0.073 . PVX_122770 672 NNTHCVK|SN 0.075 . PVX_122770 681 TSLSNSK|KK 0.059 . PVX_122770 682 SLSNSKK|KK 0.159 . PVX_122770 683 LSNSKKK|KK 0.127 . PVX_122770 684 SNSKKKK|KK 0.183 . PVX_122770 685 NSKKKKK|KC 0.112 . PVX_122770 686 SKKKKKK|CT 0.171 . ____________________________^_________________

Fasta :-
>PVX_122770 GGGTCCACCATCGCGTCTTATCAGTGAGGTCACCTCAAAACGGAAGCCACCTCGCAGCGG TAAAGCCGCCTCACCACGGAAGCCCCCACGAACGTCGCATATTATGAGCCGCGCAGTCAG GCCAGAGGAATGAACTCTCTAACAGGAAGAAACGGGAAAAATGACAACGATGATCAAGCT GCATTATGACGAGAAAAATGACGAAGAAGAAAATATGATTATTCGGTGCGCCGACTACGA GACGTTCAAATCCTATGTACTAAAAAAATACGACAAAATATACGAAATTGTAAACTACGA AAATGAGAATATAAATTATTATAGCGTCAAATGGATCAACTTCATAAACAGGAGAGTACC AATTTTGCTGCAAAATAAAAGCGGGCCATGTCCTCTCCTCTGCATTACGAACATTCTGCT TTTACGTAACCAGTTACAGATTGACAAGAAAATAAAAAAAATATCGCAGAGCTTCCTCGA AAGTAAAATTATGAACATACTGCTCGAGTCCAATAGGAAAAATGTGACTGATAACACCGC GTCGTGTAATTATAGGAAAAACATAATCGAGTGTGTGGATATTTTGCCCCAGTTAAAATA CGGACTGGATGTTAATTGTAAATTTACGAATATTCATTCTTTTGAATACACCAAAGGGTT GTGCATTTTTGACATGCTCAACATCCCACTGTATCATGGCTGGGTCATCTCGTCGGACGA TGTGATGTTCTACTCCTACTTGAAAGATTATTCGTATAATGTTATTATAAATAAAATTGT GAGATATAATGAATACTACGAGAGGAAGAAGAAAAAAAACGCAGACGAGTCGTCCAATGA GAAAACCACCATTTTGTACCAACTGGAGGATGTGAAGGAGGAAAAAAGGGACGACTGCGA TTTGGGAAAGCCTTGCGAGAGGGATGCGCTCATGGATGGCCCGACAAATAACCCAGGAGC AGCCTCCAACAGTGATCCGAAAGGCATCCCCAACGATGCCGCCCACGAATTAGCCAAAGG AACAAGCAAAAGTACAGAAAGAAATGATAAAAAAAAAAGCATAAATGGTATACCCATCTT TCCAGATGATCTTGACCTTGACCTTGACCAAATTTCAGAAGAAAATTTCAAAACGACATC ATTTCAGGATAGCTCCTCTGTTCACGTTAGTACTGTCTCCCCGTTGGATGCAGACACGGC GAAAAAAAAGAACCCAAACTTTGGCAAAAAAAACACAAGCGCGGATGCGTGTAGTAGTAG GAGGAGGACCCACAGCAACGTGATTAACTTGAAGCAGACCTGCTCCATAGATTTGGAAAA AGGTGCAAATAAGTACAGCGTCGAAACGGGGAGGAAGTCCGACGGATTTTTTATAAAGGA GGGTAAAACGCCAAGCAATTTGGCCTTCCCTGCAAAAAAGAGCAATGCCAATAGGAATAC CTCCCTTGGTGGTAATGCAAATATTAGTACCCTTGCCAATGTTGTTAGCCCCATCAGCAG TGATAACAGCAGCGGCGATGTGAACGTGGTAAGTACGCCCAAATTTCCGGAGGACCCCCT GCCGACCACCTCCACCAGTCTCATTCCAATAGGATACTCTTCTGAGGGAAATACCCAAGG TAGATCCAAAAAATCTATCTTGGATGAAAAAGCCATCAGAAATAATGAACTCTTTATGGA ATCTAACAAAATAGCTAGCTTGACTAGCGAAACGGCAAATGCAGATATAGCAGATAATTA CACAGAAAATAGTGAAAATTTTATTATGAAAAATTACAACACAGATATAAATTTAACTCC ATACGAAATTCACGAAGCGTTAATCATTTCTGAATTTCTGGAAACGTACAAAACGCAGTT AACCCTAGTTGGGTTGAAATTATTGCGAGAAAATTTGAACCCAAATCAACTTGTAGCCTT TTTCAGGAATAACCATTTTAACACCCTTTTTAAATATGAAAATAAATTGTTCCTGCTGGC TGCAGACATTTCCTTTCTACATTTGAGTTGTACATGGGAATTATTTGACAACGTAGATAA TGACACCTCCTACTATGATAACAATTTTAGGTGCATATCGAATCAGAAGAATTTGGAAAA TAATTTAAACCATTCCATCATTTATTTGAAGAATTATGATAGGGCTAGTGCCAAAAATAA CACGCATTGTGTCAAGTCGAATACGTCCCTTTCTAATAGCAAGAAGAAGAAGAAAAAGTG TACCTTTATGTAG
Download Fasta

Fasta :-

MTTMIKLHYDEKNDEEENMIIRCADYETFKSYVLKKYDKIYEIVNYENENINYYSVKWIN FINRRVPILLQNKSGPCPLLCITNILLLRNQLQIDKKIKKISQSFLESKIMNILLESNRK NVTDNTASCNYRKNIIECVDILPQLKYGLDVNCKFTNIHSFEYTKGLCIFDMLNIPLYHG WVISSDDVMFYSYLKDYSYNVIINKIVRYNEYYERKKKKNADESSNEKTTILYQLEDVKE EKRDDCDLGKPCERDALMDGPTNNPGAASNSDPKGIPNDAAHELAKGTSKSTERNDKKKS INGIPIFPDDLDLDLDQISEENFKTTSFQDSSSVHVSTVSPLDADTAKKKNPNFGKKNTS ADACSSRRRTHSNVINLKQTCSIDLEKGANKYSVETGRKSDGFFIKEGKTPSNLAFPAKK SNANRNTSLGGNANISTLANVVSPISSDNSSGDVNVVSTPKFPEDPLPTTSTSLIPIGYS SEGNTQGRSKKSILDEKAIRNNELFMESNKIASLTSETANADIADNYTENSENFIMKNYN TDINLTPYEIHEALIISEFLETYKTQLTLVGLKLLRENLNPNQLVAFFRNNHFNTLFKYE NKLFLLAADISFLHLSCTWELFDNVDNDTSYYDNNFRCISNQKNLENNLNHSIIYLKNYD RASAKNNTHCVKSNTSLSNSKKKKKKCTFM

No Results

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	PVX_122770	T	459	0.586	0.544	PVX_122770	T	472	0.545	0.292	PVX_122770	T	470	0.540	0.184	PVX_122770	T	469	0.519	0.608	PVX_122770	S	458	0.502	0.044

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	PVX_122770	T	459	0.586	0.544	PVX_122770	T	472	0.545	0.292	PVX_122770	T	470	0.540	0.184	PVX_122770	T	469	0.519	0.608	PVX_122770	S	458	0.502	0.044

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	PVX_122770	492 S	RSKKSILDE	0.996	unsp	PVX_122770	492 S	RSKKSILDE	0.996	unsp	PVX_122770	492 S	RSKKSILDE	0.996	unsp	PVX_122770	663 S	YDRASAKNN	0.996	unsp	PVX_122770	680 S	SLSNSKKKK	0.994	unsp	PVX_122770	291 S	GTSKSTERN	0.997	unsp	PVX_122770	340 S	VSTVSPLDA	0.992	unsp

PVX_122770

PVX_122770 | conserved protein, unknown function

ID's

UniProt_ID: A5JZH9

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:1990380 GO:0004843

Computed_GO_Functions: Lys48-specific deubiquitinase activity thiol-dependent ubiquitin-specific protease activity

Computed_GO_Process_IDs:

Computed_GO_Processes:

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India