PVX_123158 | trypsin-like serine protease, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_123158OTHER0.9781460.0116560.010198
No Results

  • Fasta :-

    >PVX_123158 MRGTYLWIFYCRTKHLRIQGPFPFLKLRAEQFADNFVRNYGDTINGVKHELKNMCRLCNM SLRMVHVSLCESANGGGDGTADGCERTFESTFESTSDHTVGRTSEHSPEHRLSDGGHGAP AESDQLEQNTQPEKNSRSKLATHLIIHYVKEYVKYIVHSLLHFCLHLCDAFYRSLSVLPN GYLEFPKQFDYSSSISDNLLSSFVTIYKIYRQSNSSEFRFKLDQLAFLGSGFIYDQRGYV LTAAHNITNTEGTFVIKNEDNFYVATVAGLHRESDVCVMKINSEEQFSHIPLDPSREFLK PGEPVITYGQIQNFDKETCSVGVVNQPRQTFTKFESFCEKEQTCLYPFIQISNPINKGMS GSPLIDKHGNLVGMIQKKIDNYGLALPVNILKNVTTHLQEEGTYKEPFLGIVLREKEQST SADYKNCKNELKIQDVLANSPADVAGIAKGDIMLTINNKRIKNICDVHEILNSTSDGYIT VDIIRHGKSKKIKVKM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_123158.fa Sequence name : PVX_123158 Sequence length : 496 VALUES OF COMPUTED PARAMETERS Coef20 : 4.254 CoefTot : -0.771 ChDiff : -1 ZoneTo : 29 KR : 6 DE : 0 CleavSite : 19 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.682 1.241 -0.022 0.499 MesoH : -0.491 0.303 -0.376 0.222 MuHd_075 : 21.643 6.344 3.610 4.940 MuHd_095 : 19.832 7.555 4.529 3.789 MuHd_100 : 17.407 8.200 3.593 3.587 MuHd_105 : 9.396 12.091 4.189 2.704 Hmax_075 : 4.500 11.667 1.692 4.030 Hmax_095 : 9.300 6.500 0.761 3.930 Hmax_100 : 11.700 8.600 0.737 4.090 Hmax_105 : 9.800 12.600 1.385 4.010 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7365 0.2635 DFMC : 0.5733 0.4267
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 496 PVX_123158 MRGTYLWIFYCRTKHLRIQGPFPFLKLRAEQFADNFVRNYGDTINGVKHELKNMCRLCNMSLRMVHVSLCESANGGGDGT 80 ADGCERTFESTFESTSDHTVGRTSEHSPEHRLSDGGHGAPAESDQLEQNTQPEKNSRSKLATHLIIHYVKEYVKYIVHSL 160 LHFCLHLCDAFYRSLSVLPNGYLEFPKQFDYSSSISDNLLSSFVTIYKIYRQSNSSEFRFKLDQLAFLGSGFIYDQRGYV 240 LTAAHNITNTEGTFVIKNEDNFYVATVAGLHRESDVCVMKINSEEQFSHIPLDPSREFLKPGEPVITYGQIQNFDKETCS 320 VGVVNQPRQTFTKFESFCEKEQTCLYPFIQISNPINKGMSGSPLIDKHGNLVGMIQKKIDNYGLALPVNILKNVTTHLQE 400 EGTYKEPFLGIVLREKEQSTSADYKNCKNELKIQDVLANSPADVAGIAKGDIMLTINNKRIKNICDVHEILNSTSDGYIT 480 VDIIRHGKSKKIKVKM 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_123158 2 -----MR|GT 0.095 . PVX_123158 12 LWIFYCR|TK 0.081 . PVX_123158 14 IFYCRTK|HL 0.072 . PVX_123158 17 CRTKHLR|IQ 0.105 . PVX_123158 26 GPFPFLK|LR 0.061 . PVX_123158 28 FPFLKLR|AE 0.084 . PVX_123158 38 FADNFVR|NY 0.129 . PVX_123158 48 DTINGVK|HE 0.054 . PVX_123158 52 GVKHELK|NM 0.061 . PVX_123158 56 ELKNMCR|LC 0.090 . PVX_123158 63 LCNMSLR|MV 0.186 . PVX_123158 86 TADGCER|TF 0.086 . PVX_123158 102 SDHTVGR|TS 0.144 . PVX_123158 111 EHSPEHR|LS 0.123 . PVX_123158 134 QNTQPEK|NS 0.063 . PVX_123158 137 QPEKNSR|SK 0.114 . PVX_123158 139 EKNSRSK|LA 0.075 . PVX_123158 150 LIIHYVK|EY 0.065 . PVX_123158 154 YVKEYVK|YI 0.068 . PVX_123158 173 LCDAFYR|SL 0.141 . PVX_123158 187 GYLEFPK|QF 0.062 . PVX_123158 208 SFVTIYK|IY 0.065 . PVX_123158 211 TIYKIYR|QS 0.106 . PVX_123158 219 SNSSEFR|FK 0.158 . PVX_123158 221 SSEFRFK|LD 0.068 . PVX_123158 237 GFIYDQR|GY 0.071 . PVX_123158 257 EGTFVIK|NE 0.059 . PVX_123158 272 TVAGLHR|ES 0.091 . PVX_123158 280 SDVCVMK|IN 0.080 . PVX_123158 296 IPLDPSR|EF 0.075 . PVX_123158 300 PSREFLK|PG 0.074 . PVX_123158 316 QIQNFDK|ET 0.073 . PVX_123158 328 GVVNQPR|QT 0.141 . PVX_123158 333 PRQTFTK|FE 0.089 . PVX_123158 340 FESFCEK|EQ 0.062 . PVX_123158 357 ISNPINK|GM 0.077 . PVX_123158 367 GSPLIDK|HG 0.062 . PVX_123158 377 LVGMIQK|KI 0.066 . PVX_123158 378 VGMIQKK|ID 0.106 . PVX_123158 392 LPVNILK|NV 0.078 . PVX_123158 405 QEEGTYK|EP 0.061 . PVX_123158 414 FLGIVLR|EK 0.115 . PVX_123158 416 GIVLREK|EQ 0.063 . PVX_123158 425 STSADYK|NC 0.076 . PVX_123158 428 ADYKNCK|NE 0.064 . PVX_123158 432 NCKNELK|IQ 0.061 . PVX_123158 449 DVAGIAK|GD 0.064 . PVX_123158 459 MLTINNK|RI 0.061 . PVX_123158 460 LTINNKR|IK 0.138 . PVX_123158 462 INNKRIK|NI 0.090 . PVX_123158 485 ITVDIIR|HG 0.068 . PVX_123158 488 DIIRHGK|SK 0.213 . PVX_123158 490 IRHGKSK|KI 0.085 . PVX_123158 491 RHGKSKK|IK 0.117 . PVX_123158 493 GKSKKIK|VK 0.088 . PVX_123158 495 SKKIKVK|M- 0.083 . ____________________________^_________________

  • Fasta :-

    >PVX_123158 CGCAACAATTCTCACCAGTTCTGCACACCATCTCGCATACCCATGCCGCATAACAGCTGG CACCTCGAAACTGAAAAACACACAAATGAGGGGAACCTACCTGTGGATATTCTACTGCAG AACAAAGCACCTGCGGATTCAGGGCCCCTTCCCCTTTTTGAAGCTGCGTGCTGAACAGTT TGCAGACAATTTTGTGCGCAATTACGGTGACACGATTAACGGTGTAAAACATGAGCTAAA AAATATGTGTCGTTTGTGTAACATGTCCCTGAGGATGGTCCATGTGTCCCTCTGCGAAAG TGCGAACGGCGGGGGGGATGGCACTGCCGATGGGTGCGAGCGTACCTTTGAGAGCACCTT TGAGAGTACCTCTGATCATACCGTTGGGCGTACCTCTGAGCACAGCCCCGAACATCGCCT CAGTGACGGCGGCCATGGCGCCCCCGCGGAGAGCGACCAGCTAGAGCAAAACACACAACC CGAAAAGAACAGCCGTTCCAAATTAGCAACCCATCTAATTATTCACTACGTTAAAGAATA TGTGAAATATATTGTCCACTCTTTACTTCATTTTTGTCTTCATTTATGTGACGCATTTTA TCGCTCCCTTTCTGTGTTGCCAAATGGCTATTTAGAATTTCCAAAGCAGTTCGATTACTC TTCGTCCATTTCGGACAACCTCTTGAGCAGCTTTGTCACGATATATAAAATCTACAGACA AAGTAACTCTTCAGAATTTCGCTTTAAGTTAGATCAACTGGCATTCCTGGGTTCGGGATT CATTTACGACCAAAGGGGATACGTTCTGACGGCGGCGCATAACATAACGAATACAGAGGG CACATTCGTTATCAAAAATGAAGACAACTTTTATGTGGCGACGGTGGCCGGTTTGCACAG GGAATCAGATGTATGCGTCATGAAAATTAACTCGGAGGAGCAGTTTAGCCACATACCTCT AGACCCCAGCAGGGAATTTTTGAAGCCGGGAGAACCAGTAATCACATACGGACAAATACA GAATTTCGATAAAGAGACCTGCAGCGTCGGCGTCGTAAATCAACCAAGACAGACCTTTAC CAAATTTGAAAGCTTTTGTGAAAAGGAGCAAACCTGTCTGTACCCCTTTATTCAAATAAG CAATCCGATTAATAAAGGCATGTCCGGCTCGCCTCTAATCGACAAGCATGGAAATCTCGT AGGAATGATACAAAAAAAAATAGATAATTACGGGTTGGCCTTGCCCGTGAATATTTTAAA AAACGTCACAACCCATTTGCAAGAGGAAGGGACGTACAAGGAGCCATTTCTGGGAATCGT CTTGAGAGAAAAAGAGCAAAGTACCTCCGCAGATTATAAAAATTGCAAAAATGAACTAAA AATACAGGACGTTTTGGCTAACTCACCCGCGGACGTTGCCGGCATAGCAAAAGGAGATAT CATGCTGACGATTAACAATAAGCGGATTAAAAACATTTGCGATGTGCACGAAATTTTGAA CAGCACATCGGATGGTTACATCACAGTTGACATAATCCGCCATGGAAAAAGCAAAAAAAT AAAAGTGAAAATGTGA
  • Download Fasta

  • Fasta :-

    MRGTYLWIFYCRTKHLRIQGPFPFLKLRAEQFADNFVRNYGDTINGVKHELKNMCRLCNM SLRMVHVSLCESANGGGDGTADGCERTFESTFESTSDHTVGRTSEHSPEHRLSDGGHGAP AESDQLEQNTQPEKNSRSKLATHLIIHYVKEYVKYIVHSLLHFCLHLCDAFYRSLSVLPN GYLEFPKQFDYSSSISDNLLSSFVTIYKIYRQSNSSEFRFKLDQLAFLGSGFIYDQRGYV LTAAHNITNTEGTFVIKNEDNFYVATVAGLHRESDVCVMKINSEEQFSHIPLDPSREFLK PGEPVITYGQIQNFDKETCSVGVVNQPRQTFTKFESFCEKEQTCLYPFIQISNPINKGMS GSPLIDKHGNLVGMIQKKIDNYGLALPVNILKNVTTHLQEEGTYKEPFLGIVLREKEQST SADYKNCKNELKIQDVLANSPADVAGIAKGDIMLTINNKRIKNICDVHEILNSTSDGYIT VDIIRHGKSKKIKVKM

  • title: protein binding site
  • coordinates: F408,L409,G410,I411,L413,N463,I464,V467,H468
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_123158107 STSEHSPEHR0.996unspPVX_123158107 STSEHSPEHR0.996unspPVX_123158107 STSEHSPEHR0.996unspPVX_123158113 SEHRLSDGGH0.991unspPVX_12315894 SSTFESTSDH0.99unspPVX_123158104 SVGRTSEHSP0.997unsp
PVX_123158      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India