PVX_123970 | ataxin-3, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_123970OTHER0.9998640.0000410.000095
No Results

  • Fasta :-

    >PVX_123970 MSKKYVYWEKQGNDRMCGLHCINAILQGPHYSEDVLATIGREIDEKEREFLKCSAGAGGS GLNDLMRKNSSNVLDDGFINISVLIECLRRKNISVKNTFEEDLKKIISSDHQDIGYICNL EQHWFGIRKIHSTWYVLDSLKSGPLYIKDINLKYYFNDIINKYHVFSVQNVNPYVSLPKA DVNFVAKNPNQFYFCTNEISEISGVSSNGFIMEERGGSGMRGEKSSFFPSGGYDKPNKFK WPEGGGRTLNDQGGSSIGGSIGGGIGSSSGFPPGVQDADDELQMALRLSMEEYAKNLPPP PEEPEGENCINFMVKLSNRKIHKRFCTTKTLADVFYWLEYESVNRPDFGPSLLLRSSYNL YQIYPRRKFCKYQNGTIELQTGEKIEQVQDTPLVDLKFEKEETFMLS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_123970.fa Sequence name : PVX_123970 Sequence length : 407 VALUES OF COMPUTED PARAMETERS Coef20 : 3.191 CoefTot : -0.428 ChDiff : -5 ZoneTo : 8 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.388 1.171 0.220 0.487 MesoH : -0.905 -0.048 -0.495 0.152 MuHd_075 : 35.718 16.404 9.563 5.130 MuHd_095 : 26.863 12.810 6.670 5.126 MuHd_100 : 25.275 12.161 6.055 4.501 MuHd_105 : 17.747 8.659 4.075 3.105 Hmax_075 : 7.175 3.938 0.560 2.083 Hmax_095 : -1.487 1.225 -1.869 1.400 Hmax_100 : 1.400 -0.500 -2.272 1.910 Hmax_105 : -1.517 0.117 -2.252 1.820 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9129 0.0871 DFMC : 0.8415 0.1585
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 407 PVX_123970 MSKKYVYWEKQGNDRMCGLHCINAILQGPHYSEDVLATIGREIDEKEREFLKCSAGAGGSGLNDLMRKNSSNVLDDGFIN 80 ISVLIECLRRKNISVKNTFEEDLKKIISSDHQDIGYICNLEQHWFGIRKIHSTWYVLDSLKSGPLYIKDINLKYYFNDII 160 NKYHVFSVQNVNPYVSLPKADVNFVAKNPNQFYFCTNEISEISGVSSNGFIMEERGGSGMRGEKSSFFPSGGYDKPNKFK 240 WPEGGGRTLNDQGGSSIGGSIGGGIGSSSGFPPGVQDADDELQMALRLSMEEYAKNLPPPPEEPEGENCINFMVKLSNRK 320 IHKRFCTTKTLADVFYWLEYESVNRPDFGPSLLLRSSYNLYQIYPRRKFCKYQNGTIELQTGEKIEQVQDTPLVDLKFEK 400 EETFMLS 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ....... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_123970 3 ----MSK|KY 0.062 . PVX_123970 4 ---MSKK|YV 0.179 . PVX_123970 10 KYVYWEK|QG 0.066 . PVX_123970 15 EKQGNDR|MC 0.087 . PVX_123970 41 VLATIGR|EI 0.145 . PVX_123970 46 GREIDEK|ER 0.060 . PVX_123970 48 EIDEKER|EF 0.068 . PVX_123970 52 KEREFLK|CS 0.068 . PVX_123970 67 GLNDLMR|KN 0.098 . PVX_123970 68 LNDLMRK|NS 0.096 . PVX_123970 89 VLIECLR|RK 0.072 . PVX_123970 90 LIECLRR|KN 0.109 . PVX_123970 91 IECLRRK|NI 0.093 . PVX_123970 96 RKNISVK|NT 0.075 . PVX_123970 104 TFEEDLK|KI 0.061 . PVX_123970 105 FEEDLKK|II 0.096 . PVX_123970 128 QHWFGIR|KI 0.073 . PVX_123970 129 HWFGIRK|IH 0.078 . PVX_123970 141 YVLDSLK|SG 0.061 . PVX_123970 148 SGPLYIK|DI 0.061 . PVX_123970 153 IKDINLK|YY 0.062 . PVX_123970 162 FNDIINK|YH 0.056 . PVX_123970 179 PYVSLPK|AD 0.054 . PVX_123970 187 DVNFVAK|NP 0.067 . PVX_123970 215 GFIMEER|GG 0.098 . PVX_123970 221 RGGSGMR|GE 0.084 . PVX_123970 224 SGMRGEK|SS 0.121 . PVX_123970 235 PSGGYDK|PN 0.058 . PVX_123970 238 GYDKPNK|FK 0.073 . PVX_123970 240 DKPNKFK|WP 0.089 . PVX_123970 247 WPEGGGR|TL 0.111 . PVX_123970 287 ELQMALR|LS 0.074 . PVX_123970 295 SMEEYAK|NL 0.059 . PVX_123970 315 CINFMVK|LS 0.072 . PVX_123970 319 MVKLSNR|KI 0.109 . PVX_123970 320 VKLSNRK|IH 0.061 . PVX_123970 323 SNRKIHK|RF 0.066 . PVX_123970 324 NRKIHKR|FC 0.313 . PVX_123970 329 KRFCTTK|TL 0.084 . PVX_123970 345 EYESVNR|PD 0.065 . PVX_123970 355 GPSLLLR|SS 0.139 . PVX_123970 366 LYQIYPR|RK 0.076 . PVX_123970 367 YQIYPRR|KF 0.158 . PVX_123970 368 QIYPRRK|FC 0.096 . PVX_123970 371 PRRKFCK|YQ 0.089 . PVX_123970 384 ELQTGEK|IE 0.055 . PVX_123970 397 TPLVDLK|FE 0.067 . PVX_123970 400 VDLKFEK|EE 0.061 . ____________________________^_________________

  • Fasta :-

    >PVX_123970 ATGAGCAAGAAGTATGTGTACTGGGAGAAGCAGGGCAACGACCGGATGTGCGGTCTTCAC TGCATAAACGCCATCCTGCAGGGCCCTCACTACAGCGAAGACGTCCTGGCCACCATCGGC AGAGAAATCGACGAGAAGGAGCGGGAGTTCCTCAAGTGCAGCGCAGGAGCTGGTGGAAGC GGCCTGAACGACCTGATGAGAAAGAACTCATCCAACGTGTTGGACGACGGGTTCATTAAC ATCTCTGTCCTCATCGAATGTCTAAGGAGAAAAAATATTTCCGTAAAAAATACGTTCGAA GAAGATTTAAAAAAAATAATTTCAAGTGACCACCAAGACATAGGATACATATGTAACTTG GAGCAGCACTGGTTCGGCATAAGAAAAATACACAGCACCTGGTATGTCCTTGACAGTTTG AAGAGTGGCCCCCTCTACATAAAGGATATCAATTTGAAATATTATTTCAATGACATTATT AACAAGTACCATGTGTTCTCTGTTCAGAATGTAAATCCCTATGTGTCTTTGCCCAAGGCG GACGTTAACTTTGTGGCGAAGAACCCCAATCAGTTTTACTTTTGCACAAATGAAATTTCT GAAATATCTGGCGTGTCTTCCAATGGGTTTATTATGGAGGAGAGGGGTGGTTCGGGTATG CGTGGCGAGAAGAGCTCTTTTTTTCCCTCCGGTGGGTATGACAAGCCGAACAAGTTTAAG TGGCCGGAGGGCGGGGGGCGGACGTTGAACGACCAGGGGGGGAGCAGCATTGGCGGCAGC ATTGGCGGCGGCATTGGCAGCAGTAGCGGCTTCCCCCCCGGTGTGCAGGACGCGGACGAC GAGCTGCAGATGGCGCTGCGCCTCTCCATGGAGGAGTACGCCAAGAATTTGCCCCCTCCA CCAGAAGAACCCGAGGGAGAAAACTGCATTAACTTTATGGTCAAACTTTCGAATAGGAAG ATCCACAAGCGGTTCTGCACCACCAAGACGTTGGCGGACGTCTTCTACTGGCTTGAATAC GAGTCCGTGAACAGGCCGGATTTCGGCCCCTCTCTGCTCCTCAGGAGCAGCTATAACCTT TACCAAATATATCCGCGGAGGAAGTTTTGCAAGTACCAGAACGGGACCATCGAGCTGCAG ACGGGGGAGAAGATCGAGCAGGTGCAGGATACCCCCCTGGTGGACTTGAAGTTCGAGAAG GAGGAGACGTTCATGTTGTCGTAG
  • Download Fasta

  • Fasta :-

    MSKKYVYWEKQGNDRMCGLHCINAILQGPHYSEDVLATIGREIDEKEREFLKCSAGAGGS GLNDLMRKNSSNVLDDGFINISVLIECLRRKNISVKNTFEEDLKKIISSDHQDIGYICNL EQHWFGIRKIHSTWYVLDSLKSGPLYIKDINLKYYFNDIINKYHVFSVQNVNPYVSLPKA DVNFVAKNPNQFYFCTNEISEISGVSSNGFIMEERGGSGMRGEKSSFFPSGGYDKPNKFK WPEGGGRTLNDQGGSSIGGSIGGGIGSSSGFPPGVQDADDELQMALRLSMEEYAKNLPPP PEEPEGENCINFMVKLSNRKIHKRFCTTKTLADVFYWLEYESVNRPDFGPSLLLRSSYNL YQIYPRRKFCKYQNGTIELQTGEKIEQVQDTPLVDLKFEKEETFMLS

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_123970289 SALRLSMEEY0.997unspPVX_123970289 SALRLSMEEY0.997unspPVX_123970289 SALRLSMEEY0.997unspPVX_12397094 SRKNISVKNT0.997unspPVX_123970218 SERGGSGMRG0.993unsp
PVX_123970      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India