PY17X_0408000 | ATP-dependent Clp protease proteolytic subunit, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PY17X_0408000SP0.0239190.9754060.000675CS pos: 20-21. IEA-KP. Pr: 0.9647
No Results

  • Fasta :-

    >PY17X_0408000 MIYLILFTFLILIKNNTIEAKPNLKKPNTLTFINLSNTNLFEKQKKRIKEKISIQNCKCN LLTNDDIINKNIEEDVNEINNVKNISENFDKTKVNINNDVTKIDQEEESKIRQNAMEKMV EKMVEKILKKKKYKKLEKLLCCNNSIKDMKKNIKLYFFKKRIIYLTDEINKKTSDELIKQ LLYLDNINHNDIKIYINSPGGSINEGLAILDIFNYIKSDIQTISFGLVASMASVILASGK KGKRKSFPNCRIMIHQPLGNAFGHPHDIEIQTKEILYLKKLLYYYLSKFTNQNEQTIEKN SDRDYYMNSFEAKKYGIIDQVIETKLPHPYFTDLTEN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_0408000.fa Sequence name : PY17X_0408000 Sequence length : 337 VALUES OF COMPUTED PARAMETERS Coef20 : 4.456 CoefTot : -1.057 ChDiff : 13 ZoneTo : 41 KR : 4 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.971 1.829 0.343 0.655 MesoH : -0.534 0.345 -0.379 0.247 MuHd_075 : 19.193 12.735 6.152 5.055 MuHd_095 : 22.664 13.705 6.310 4.118 MuHd_100 : 23.333 14.873 6.637 4.238 MuHd_105 : 20.181 14.691 6.329 4.518 Hmax_075 : 15.313 5.100 0.050 2.800 Hmax_095 : 10.400 23.200 0.840 2.389 Hmax_100 : 10.400 12.500 0.840 4.590 Hmax_105 : -9.100 -0.000 1.045 0.190 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7800 0.2200 DFMC : 0.7774 0.2226
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 337 PY17X_0408000 MIYLILFTFLILIKNNTIEAKPNLKKPNTLTFINLSNTNLFEKQKKRIKEKISIQNCKCNLLTNDDIINKNIEEDVNEIN 80 NVKNISENFDKTKVNINNDVTKIDQEEESKIRQNAMEKMVEKMVEKILKKKKYKKLEKLLCCNNSIKDMKKNIKLYFFKK 160 RIIYLTDEINKKTSDELIKQLLYLDNINHNDIKIYINSPGGSINEGLAILDIFNYIKSDIQTISFGLVASMASVILASGK 240 KGKRKSFPNCRIMIHQPLGNAFGHPHDIEIQTKEILYLKKLLYYYLSKFTNQNEQTIEKNSDRDYYMNSFEAKKYGIIDQ 320 VIETKLPHPYFTDLTEN 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_0408000 14 TFLILIK|NN 0.056 . PY17X_0408000 21 NNTIEAK|PN 0.071 . PY17X_0408000 25 EAKPNLK|KP 0.054 . PY17X_0408000 26 AKPNLKK|PN 0.081 . PY17X_0408000 43 NTNLFEK|QK 0.062 . PY17X_0408000 45 NLFEKQK|KR 0.063 . PY17X_0408000 46 LFEKQKK|RI 0.110 . PY17X_0408000 47 FEKQKKR|IK 0.231 . PY17X_0408000 49 KQKKRIK|EK 0.066 . PY17X_0408000 51 KKRIKEK|IS 0.076 . PY17X_0408000 58 ISIQNCK|CN 0.063 . PY17X_0408000 70 NDDIINK|NI 0.061 . PY17X_0408000 83 NEINNVK|NI 0.066 . PY17X_0408000 91 ISENFDK|TK 0.064 . PY17X_0408000 93 ENFDKTK|VN 0.067 . PY17X_0408000 102 INNDVTK|ID 0.077 . PY17X_0408000 110 DQEEESK|IR 0.058 . PY17X_0408000 112 EEESKIR|QN 0.082 . PY17X_0408000 118 RQNAMEK|MV 0.092 . PY17X_0408000 122 MEKMVEK|MV 0.111 . PY17X_0408000 126 VEKMVEK|IL 0.061 . PY17X_0408000 129 MVEKILK|KK 0.057 . PY17X_0408000 130 VEKILKK|KK 0.089 . PY17X_0408000 131 EKILKKK|KY 0.105 . PY17X_0408000 132 KILKKKK|YK 0.089 . PY17X_0408000 134 LKKKKYK|KL 0.088 . PY17X_0408000 135 KKKKYKK|LE 0.073 . PY17X_0408000 138 KYKKLEK|LL 0.058 . PY17X_0408000 147 CCNNSIK|DM 0.073 . PY17X_0408000 150 NSIKDMK|KN 0.064 . PY17X_0408000 151 SIKDMKK|NI 0.099 . PY17X_0408000 154 DMKKNIK|LY 0.060 . PY17X_0408000 159 IKLYFFK|KR 0.066 . PY17X_0408000 160 KLYFFKK|RI 0.102 . PY17X_0408000 161 LYFFKKR|II 0.163 . PY17X_0408000 171 LTDEINK|KT 0.064 . PY17X_0408000 172 TDEINKK|TS 0.104 . PY17X_0408000 179 TSDELIK|QL 0.059 . PY17X_0408000 193 INHNDIK|IY 0.070 . PY17X_0408000 217 DIFNYIK|SD 0.072 . PY17X_0408000 240 VILASGK|KG 0.056 . PY17X_0408000 241 ILASGKK|GK 0.116 . PY17X_0408000 243 ASGKKGK|RK 0.066 . PY17X_0408000 244 SGKKGKR|KS 0.148 . PY17X_0408000 245 GKKGKRK|SF 0.159 . PY17X_0408000 251 KSFPNCR|IM 0.087 . PY17X_0408000 273 DIEIQTK|EI 0.059 . PY17X_0408000 279 KEILYLK|KL 0.053 . PY17X_0408000 280 EILYLKK|LL 0.089 . PY17X_0408000 288 LYYYLSK|FT 0.081 . PY17X_0408000 299 NEQTIEK|NS 0.059 . PY17X_0408000 303 IEKNSDR|DY 0.101 . PY17X_0408000 313 MNSFEAK|KY 0.107 . PY17X_0408000 314 NSFEAKK|YG 0.090 . PY17X_0408000 325 DQVIETK|LP 0.062 . ____________________________^_________________

  • Fasta :-

    >PY17X_0408000 ATGATATATTTAATATTGTTCACATTTTTGATCTTAATAAAAAATAATACAATTGAAGCA AAACCAAATTTAAAGAAACCAAACACTTTAACGTTTATAAATTTATCAAATACAAATTTA TTTGAAAAACAAAAAAAAAGGATAAAAGAAAAGATTAGTATTCAAAATTGTAAATGTAAT TTATTAACAAATGATGATATAATAAATAAAAATATAGAAGAAGATGTAAATGAAATAAAT AATGTAAAAAATATTTCCGAAAATTTCGATAAAACTAAAGTTAATATAAATAATGATGTT ACAAAAATAGATCAAGAGGAGGAAAGTAAAATCAGACAAAATGCGATGGAAAAAATGGTA GAAAAAATGGTAGAAAAAATATTGAAAAAAAAGAAATACAAAAAATTGGAAAAATTATTA TGTTGTAATAATAGTATTAAAGATATGAAAAAAAATATAAAATTATATTTTTTTAAAAAA AGAATAATATATTTAACAGATGAAATAAATAAAAAAACATCAGATGAACTTATTAAGCAA TTATTATATTTAGATAATATAAATCATAATGATATAAAAATATATATTAATTCTCCTGGT GGTTCAATAAATGAAGGTTTAGCAATTTTAGATATTTTTAATTATATAAAATCAGATATA CAAACAATATCATTTGGTTTAGTAGCCTCAATGGCTTCTGTAATTTTAGCAAGTGGAAAA AAAGGAAAAAGGAAATCGTTTCCAAATTGTCGAATTATGATACATCAACCATTAGGAAAT GCATTTGGTCATCCTCATGATATTGAAATACAAACAAAAGAAATTCTTTATCTTAAAAAA CTTTTATATTATTATTTATCAAAATTTACAAATCAAAATGAACAAACAATTGAAAAAAAT TCAGACAGAGATTATTATATGAATTCCTTCGAAGCAAAAAAATATGGAATTATTGATCAA GTCATTGAAACTAAATTACCACATCCTTATTTTACTGACCTAACCGAGAATTGA
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  • Fasta :-

    MIYLILFTFLILIKNNTIEAKPNLKKPNTLTFINLSNTNLFEKQKKRIKEKISIQNCKCN LLTNDDIINKNIEEDVNEINNVKNISENFDKTKVNINNDVTKIDQEEESKIRQNAMEKMV EKMVEKILKKKKYKKLEKLLCCNNSIKDMKKNIKLYFFKKRIIYLTDEINKKTSDELIKQ LLYLDNINHNDIKIYINSPGGSINEGLAILDIFNYIKSDIQTISFGLVASMASVILASGK KGKRKSFPNCRIMIHQPLGNAFGHPHDIEIQTKEILYLKKLLYYYLSKFTNQNEQTIEKN SDRDYYMNSFEAKKYGIIDQVIETKLPHPYFTDLTEN

  • title: active site residues
  • coordinates: S230,H255,D304
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_0408000174 SNKKTSDELI0.994unspPY17X_0408000301 SIEKNSDRDY0.997unsp
PY17X_0408000


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India