PY17X_0419800 | signal peptidase complex subunit 3, putative

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  • Fasta :-

    >PY17X_0419800 MDSLLNRINVIFYSMALCFITLCLFNYGTSFYLFDENSIVTDVKVKSVKRLVYNKYINGD EAVLSLDLSYDMTKAFNWNLKQLFVYVLVTYETPEKAENEVIIQDYIINNKKSAKKTYKN FITKYSLKDYYNGLRNNLINIQVCYKYMPIIGLSRTYHGAKTSYMMPDEYFDAMPARYPL YYPDK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_0419800.fa Sequence name : PY17X_0419800 Sequence length : 185 VALUES OF COMPUTED PARAMETERS Coef20 : 4.680 CoefTot : -0.017 ChDiff : 4 ZoneTo : 34 KR : 1 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.976 2.182 0.459 0.711 MesoH : -0.616 0.466 -0.365 0.230 MuHd_075 : 21.577 10.700 5.179 3.603 MuHd_095 : 25.042 18.469 5.959 6.402 MuHd_100 : 25.332 20.441 7.633 6.035 MuHd_105 : 23.727 21.590 8.005 5.227 Hmax_075 : 14.300 19.133 5.362 8.040 Hmax_095 : 21.400 22.100 3.822 7.840 Hmax_100 : 22.600 24.100 5.361 8.040 Hmax_105 : 5.338 13.500 1.876 3.300 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9012 0.0988 DFMC : 0.8670 0.1330
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 185 PY17X_0419800 MDSLLNRINVIFYSMALCFITLCLFNYGTSFYLFDENSIVTDVKVKSVKRLVYNKYINGDEAVLSLDLSYDMTKAFNWNL 80 KQLFVYVLVTYETPEKAENEVIIQDYIINNKKSAKKTYKNFITKYSLKDYYNGLRNNLINIQVCYKYMPIIGLSRTYHGA 160 KTSYMMPDEYFDAMPARYPLYYPDK 240 ................................................................................ 80 ................................................................................ 160 ......................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_0419800 7 MDSLLNR|IN 0.087 . PY17X_0419800 44 SIVTDVK|VK 0.063 . PY17X_0419800 46 VTDVKVK|SV 0.089 . PY17X_0419800 49 VKVKSVK|RL 0.058 . PY17X_0419800 50 KVKSVKR|LV 0.207 . PY17X_0419800 55 KRLVYNK|YI 0.077 . PY17X_0419800 74 LSYDMTK|AF 0.072 . PY17X_0419800 81 AFNWNLK|QL 0.070 . PY17X_0419800 96 TYETPEK|AE 0.062 . PY17X_0419800 111 DYIINNK|KS 0.053 . PY17X_0419800 112 YIINNKK|SA 0.160 . PY17X_0419800 115 NNKKSAK|KT 0.086 . PY17X_0419800 116 NKKSAKK|TY 0.088 . PY17X_0419800 119 SAKKTYK|NF 0.070 . PY17X_0419800 124 YKNFITK|YS 0.066 . PY17X_0419800 128 ITKYSLK|DY 0.081 . PY17X_0419800 135 DYYNGLR|NN 0.068 . PY17X_0419800 146 NIQVCYK|YM 0.066 . PY17X_0419800 155 PIIGLSR|TY 0.081 . PY17X_0419800 161 RTYHGAK|TS 0.065 . PY17X_0419800 177 FDAMPAR|YP 0.099 . PY17X_0419800 185 PLYYPDK|-- 0.068 . ____________________________^_________________

  • Fasta :-

    >PY17X_0419800 ATGGATAGCCTTTTAAATAGAATAAATGTAATTTTTTATTCGATGGCATTATGTTTTATT ACCCTGTGTCTTTTTAATTATGGAACATCATTTTATTTATTTGATGAAAATAGTATAGTA ACTGATGTAAAAGTGAAAAGTGTAAAAAGGTTAGTTTATAATAAATATATAAACGGTGAT GAAGCAGTTTTATCTTTAGATTTATCATATGATATGACAAAAGCCTTTAATTGGAATTTA AAACAGTTATTTGTATATGTATTAGTAACATATGAAACCCCTGAAAAGGCAGAAAATGAA GTTATTATACAAGACTATATTATAAATAACAAAAAAAGTGCAAAAAAAACATATAAAAAT TTTATTACAAAATATTCCCTTAAAGATTATTATAATGGATTAAGAAATAATTTAATAAAT ATACAAGTATGTTATAAATATATGCCAATAATCGGATTATCACGAACTTACCACGGGGCC AAAACATCGTATATGATGCCTGATGAATATTTTGATGCGATGCCAGCTAGATATCCATTA TATTATCCTGACAAATAA
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  • Fasta :-

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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_0419800126 SITKYSLKDY0.993unspPY17X_0419800126 SITKYSLKDY0.993unspPY17X_0419800126 SITKYSLKDY0.993unspPY17X_041980047 SVKVKSVKRL0.997unspPY17X_0419800113 SNNKKSAKKT0.994unsp
PY17X_0419800


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India