PY17X_0515600 | tRNA N6-adenosine threonylcarbamoyltransferase, putative

  • Computed_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PY17X_0515600OTHER0.9998530.0001270.000020
No Results

  • Fasta :-

    >PY17X_0515600 MGEISKKKMYILGMEGSANKLGISIIDEEMKILVNMRRTYVSEIGCGFIPREINAHHKYY IIDMIKDCLNKLKIKITNIGLICYTKGPGIGSALYVAYNISKLFSLLFNIPVIGVNHCIA HIEMGIFITKLYHPIILYVSGSNTQIIYYNNYKKKYEIIGETLDIAIGNVIDRSARILQI SNSPSPGYNVELWARKKKLLRLLQKIEAKEGGTCVKQANGKTYQHGQHGQHSNDVGGDGG GDALASSPKDGSSVKFSKKENQLQSAIYYNELLQFPYTIKGMDISFSGYDFYISKYFSKY INKNSKKGNPQYKNNKKKGTNQINKDEDNKKKQKINENMSPQNYNNQNATIVNDDTLTLE EELCQDYKNGDKAGTNPNHGQEDPNKSSDKPGTNPNHGQEDPNKSSDKAVTNPNHVSPNY SFLHGMKGSSYYEENIVYKNENKQNYGQNSEYSDDNCSIETSSDYYEKELEENISEEVEA LKLSDEEKRKIQICYSLQHHIFSMLIEITERAIAFTNSKEVIIVGGVGCNVFLQNMMKKM AKQKNIKIGFMDHSYCVDNGAMIAYTGYIEYLNSKNKNNFNFDNISIHQRYRTDDVYVTW R
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_0515600.fa Sequence name : PY17X_0515600 Sequence length : 601 VALUES OF COMPUTED PARAMETERS Coef20 : 3.268 CoefTot : -0.250 ChDiff : 6 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.247 1.671 0.156 0.638 MesoH : 0.511 0.939 -0.076 0.457 MuHd_075 : 15.837 7.302 3.957 2.243 MuHd_095 : 24.933 9.501 6.042 2.633 MuHd_100 : 15.358 11.332 4.002 2.438 MuHd_105 : 9.461 12.952 2.410 2.493 Hmax_075 : 15.283 10.383 1.810 4.200 Hmax_095 : 12.075 7.000 0.995 3.028 Hmax_100 : 13.200 9.100 1.256 3.640 Hmax_105 : 6.400 9.900 -0.634 3.020 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9645 0.0355 DFMC : 0.9535 0.0465
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 601 PY17X_0515600 MGEISKKKMYILGMEGSANKLGISIIDEEMKILVNMRRTYVSEIGCGFIPREINAHHKYYIIDMIKDCLNKLKIKITNIG 80 LICYTKGPGIGSALYVAYNISKLFSLLFNIPVIGVNHCIAHIEMGIFITKLYHPIILYVSGSNTQIIYYNNYKKKYEIIG 160 ETLDIAIGNVIDRSARILQISNSPSPGYNVELWARKKKLLRLLQKIEAKEGGTCVKQANGKTYQHGQHGQHSNDVGGDGG 240 GDALASSPKDGSSVKFSKKENQLQSAIYYNELLQFPYTIKGMDISFSGYDFYISKYFSKYINKNSKKGNPQYKNNKKKGT 320 NQINKDEDNKKKQKINENMSPQNYNNQNATIVNDDTLTLEEELCQDYKNGDKAGTNPNHGQEDPNKSSDKPGTNPNHGQE 400 DPNKSSDKAVTNPNHVSPNYSFLHGMKGSSYYEENIVYKNENKQNYGQNSEYSDDNCSIETSSDYYEKELEENISEEVEA 480 LKLSDEEKRKIQICYSLQHHIFSMLIEITERAIAFTNSKEVIIVGGVGCNVFLQNMMKKMAKQKNIKIGFMDHSYCVDNG 560 AMIAYTGYIEYLNSKNKNNFNFDNISIHQRYRTDDVYVTWR 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ......................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_0515600 6 -MGEISK|KK 0.064 . PY17X_0515600 7 MGEISKK|KM 0.092 . PY17X_0515600 8 GEISKKK|MY 0.130 . PY17X_0515600 20 MEGSANK|LG 0.059 . PY17X_0515600 31 IIDEEMK|IL 0.063 . PY17X_0515600 37 KILVNMR|RT 0.092 . PY17X_0515600 38 ILVNMRR|TY 0.120 . PY17X_0515600 51 GCGFIPR|EI 0.105 . PY17X_0515600 58 EINAHHK|YY 0.071 . PY17X_0515600 66 YIIDMIK|DC 0.063 . PY17X_0515600 71 IKDCLNK|LK 0.059 . PY17X_0515600 73 DCLNKLK|IK 0.065 . PY17X_0515600 75 LNKLKIK|IT 0.074 . PY17X_0515600 86 GLICYTK|GP 0.067 . PY17X_0515600 102 VAYNISK|LF 0.060 . PY17X_0515600 130 MGIFITK|LY 0.066 . PY17X_0515600 153 IYYNNYK|KK 0.063 . PY17X_0515600 154 YYNNYKK|KY 0.133 . PY17X_0515600 155 YNNYKKK|YE 0.194 . PY17X_0515600 173 IGNVIDR|SA 0.196 . PY17X_0515600 176 VIDRSAR|IL 0.239 . PY17X_0515600 195 NVELWAR|KK 0.066 . PY17X_0515600 196 VELWARK|KK 0.062 . PY17X_0515600 197 ELWARKK|KL 0.081 . PY17X_0515600 198 LWARKKK|LL 0.323 . PY17X_0515600 201 RKKKLLR|LL 0.102 . PY17X_0515600 205 LLRLLQK|IE 0.068 . PY17X_0515600 209 LQKIEAK|EG 0.078 . PY17X_0515600 216 EGGTCVK|QA 0.074 . PY17X_0515600 221 VKQANGK|TY 0.075 . PY17X_0515600 249 ALASSPK|DG 0.082 . PY17X_0515600 255 KDGSSVK|FS 0.070 . PY17X_0515600 258 SSVKFSK|KE 0.072 . PY17X_0515600 259 SVKFSKK|EN 0.089 . PY17X_0515600 280 QFPYTIK|GM 0.066 . PY17X_0515600 295 YDFYISK|YF 0.070 . PY17X_0515600 299 ISKYFSK|YI 0.075 . PY17X_0515600 303 FSKYINK|NS 0.067 . PY17X_0515600 306 YINKNSK|KG 0.066 . PY17X_0515600 307 INKNSKK|GN 0.125 . PY17X_0515600 313 KGNPQYK|NN 0.083 . PY17X_0515600 316 PQYKNNK|KK 0.070 . PY17X_0515600 317 QYKNNKK|KG 0.086 . PY17X_0515600 318 YKNNKKK|GT 0.272 . PY17X_0515600 325 GTNQINK|DE 0.079 . PY17X_0515600 330 NKDEDNK|KK 0.060 . PY17X_0515600 331 KDEDNKK|KQ 0.107 . PY17X_0515600 332 DEDNKKK|QK 0.112 . PY17X_0515600 334 DNKKKQK|IN 0.071 . PY17X_0515600 368 ELCQDYK|NG 0.067 . PY17X_0515600 372 DYKNGDK|AG 0.055 . PY17X_0515600 386 GQEDPNK|SS 0.097 . PY17X_0515600 390 PNKSSDK|PG 0.063 . PY17X_0515600 404 GQEDPNK|SS 0.108 . PY17X_0515600 408 PNKSSDK|AV 0.082 . PY17X_0515600 427 SFLHGMK|GS 0.072 . PY17X_0515600 439 EENIVYK|NE 0.068 . PY17X_0515600 443 VYKNENK|QN 0.062 . PY17X_0515600 468 SSDYYEK|EL 0.072 . PY17X_0515600 482 EEVEALK|LS 0.059 . PY17X_0515600 488 KLSDEEK|RK 0.070 . PY17X_0515600 489 LSDEEKR|KI 0.146 . PY17X_0515600 490 SDEEKRK|IQ 0.076 . PY17X_0515600 511 LIEITER|AI 0.074 . PY17X_0515600 519 IAFTNSK|EV 0.077 . PY17X_0515600 538 FLQNMMK|KM 0.064 . PY17X_0515600 539 LQNMMKK|MA 0.154 . PY17X_0515600 542 MMKKMAK|QK 0.079 . PY17X_0515600 544 KKMAKQK|NI 0.096 . PY17X_0515600 547 AKQKNIK|IG 0.059 . PY17X_0515600 575 IEYLNSK|NK 0.056 . PY17X_0515600 577 YLNSKNK|NN 0.066 . PY17X_0515600 590 NISIHQR|YR 0.107 . PY17X_0515600 592 SIHQRYR|TD 0.106 . PY17X_0515600 601 DVYVTWR|-- 0.091 . ____________________________^_________________

  • Fasta :-

    >PY17X_0515600 ATGGGGGAAATTTCCAAAAAAAAAATGTATATTTTAGGAATGGAAGGAAGTGCTAATAAG TTAGGAATAAGTATAATAGATGAAGAAATGAAGATACTTGTAAATATGAGAAGAACATAT GTATCAGAAATAGGATGTGGTTTTATTCCTAGAGAAATAAATGCTCATCATAAATATTAT ATAATTGATATGATAAAAGATTGTTTAAATAAATTAAAAATAAAAATAACAAATATAGGA TTAATATGTTATACTAAAGGACCAGGTATTGGTTCAGCATTATATGTAGCATATAATATA TCAAAATTATTTTCTTTATTATTTAACATACCAGTTATAGGGGTAAATCATTGTATTGCT CATATAGAAATGGGAATATTTATTACAAAATTATATCATCCAATTATTTTATATGTTAGT GGAAGTAACACACAAATTATATATTATAATAATTATAAAAAAAAATATGAAATAATAGGA GAAACTTTAGATATTGCTATTGGAAATGTTATTGATAGATCTGCTCGAATTTTACAAATT TCAAATTCCCCATCTCCTGGATATAATGTAGAATTATGGGCTCGAAAAAAAAAACTATTA AGATTATTACAAAAGATTGAGGCAAAAGAAGGGGGAACTTGTGTTAAGCAGGCCAATGGG AAAACTTATCAACATGGGCAACATGGGCAACACAGCAATGATGTTGGTGGTGATGGTGGT GGCGACGCGTTGGCTTCTAGCCCCAAAGATGGTTCTTCAGTAAAATTTAGTAAAAAAGAA AATCAGCTACAATCTGCTATATATTATAATGAACTATTACAATTCCCATATACAATTAAA GGTATGGACATATCTTTTAGTGGATACGATTTTTATATTAGCAAATATTTTTCAAAATAT ATAAATAAAAATAGCAAAAAGGGTAATCCTCAATATAAAAATAATAAGAAAAAAGGAACC AATCAAATTAATAAAGATGAAGATAATAAAAAAAAACAAAAAATAAATGAAAATATGTCT CCACAAAATTATAATAATCAAAATGCAACTATTGTAAATGATGACACTCTAACTTTGGAA GAAGAGCTATGCCAAGATTATAAAAATGGTGATAAAGCAGGCACGAATCCAAACCATGGC CAAGAAGACCCGAACAAAAGTAGCGATAAACCAGGCACGAATCCAAACCATGGCCAAGAA GACCCAAACAAAAGTAGCGATAAAGCAGTTACGAACCCAAACCATGTATCACCCAATTAT AGTTTCTTACACGGAATGAAAGGAAGCTCTTATTATGAAGAAAATATTGTATATAAAAAT GAAAACAAACAAAATTATGGTCAAAATAGTGAATATTCTGATGATAATTGTTCAATAGAA ACAAGTTCAGATTATTATGAAAAAGAATTAGAAGAAAATATATCTGAAGAAGTTGAAGCT TTAAAATTAAGTGATGAAGAAAAAAGAAAAATTCAAATATGTTATAGTTTACAACATCAT ATATTTAGTATGCTAATTGAAATAACTGAAAGAGCTATTGCATTTACAAATAGTAAAGAA GTAATTATTGTAGGGGGTGTTGGATGTAATGTATTTCTTCAAAATATGATGAAAAAAATG GCAAAACAAAAAAATATAAAAATCGGGTTTATGGATCATAGTTATTGTGTAGATAATGGT GCTATGATTGCTTATACTGGATATATAGAATATTTAAATTCAAAAAATAAAAATAATTTT AATTTTGATAATATATCTATTCATCAGCGATATCGAACAGATGATGTTTATGTTACATGG CGATAA
  • Download Fasta

  • Fasta :-

    MGEISKKKMYILGMEGSANKLGISIIDEEMKILVNMRRTYVSEIGCGFIPREINAHHKYY IIDMIKDCLNKLKIKITNIGLICYTKGPGIGSALYVAYNISKLFSLLFNIPVIGVNHCIA HIEMGIFITKLYHPIILYVSGSNTQIIYYNNYKKKYEIIGETLDIAIGNVIDRSARILQI SNSPSPGYNVELWARKKKLLRLLQKIEAKEGGTCVKQANGKTYQHGQHGQHSNDVGGDGG GDALASSPKDGSSVKFSKKENQLQSAIYYNELLQFPYTIKGMDISFSGYDFYISKYFSKY INKNSKKGNPQYKNNKKKGTNQINKDEDNKKKQKINENMSPQNYNNQNATIVNDDTLTLE EELCQDYKNGDKAGTNPNHGQEDPNKSSDKPGTNPNHGQEDPNKSSDKAVTNPNHVSPNY SFLHGMKGSSYYEENIVYKNENKQNYGQNSEYSDDNCSIETSSDYYEKELEENISEEVEA LKLSDEEKRKIQICYSLQHHIFSMLIEITERAIAFTNSKEVIIVGGVGCNVFLQNMMKKM AKQKNIKIGFMDHSYCVDNGAMIAYTGYIEYLNSKNKNNFNFDNISIHQRYRTDDVYVTW R

  • title: nucleotide binding site
  • coordinates: E15,G16,S17,A18,K20,G22,H117,V139,S140,G141,S142
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_0515600257 SSVKFSKKEN0.997unspPY17X_0515600257 SSVKFSKKEN0.997unspPY17X_0515600257 SSVKFSKKEN0.997unspPY17X_0515600484 SALKLSDEEK0.994unspPY17X_0515600247 SALASSPKDG0.998unspPY17X_0515600253 SKDGSSVKFS0.995unsp
PY17X_0515600


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India