PY17X_0837800 | mitochondrial-processing peptidase subunit beta, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_0837800OTHER0.7463670.0001990.253434
No Results

  • Fasta :-

    >PY17X_0837800 MIGKKINYLLGNTLKKSSRKYSTSNLINEIKNQPLTKITELSNKMKVATIQNNCEVPTIG LWISSGSKYENKMNNGVAHFLEHMIFKGTHKRNRIQLEKEIENMGAHLNAYTAREQTGYY FKCFKDDVKWCIELLSDILTNSIFDEQLIEMEKHVILREMEEVEKSTDEIIFDKLHMTAF RDHPLGYTILGPIENIKNMKKNDILNYIQKNYTSDRMVLCAVGNVNHDNIVKLAEQHFSN IKPQDEKGLIFKKEFDKIKPFFCGSEIIMRDDDSGPNAHVAVAFEGVPWTSSDSITFMLM QCIIGTYRKNEEGIVPGKLSANRTINNISNKMTVGCADYFTSFNTCYNNTGLFGFYVQCD ELAVEHAVGELMFGITSLSYSITDEEVELAKIHLKTQLISMFESSSTLAEEISRQILVYG RPISLAEFIIRLNEIDAEEVKRVAWKYLHDRDIAVAAMGALHGMPQYFDLRQKTYWLRY
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_0837800.fa Sequence name : PY17X_0837800 Sequence length : 479 VALUES OF COMPUTED PARAMETERS Coef20 : 3.853 CoefTot : -0.844 ChDiff : -6 ZoneTo : 28 KR : 6 DE : 0 CleavSite : 22 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.200 1.271 0.100 0.519 MesoH : -0.299 0.413 -0.307 0.250 MuHd_075 : 30.748 14.738 9.185 5.365 MuHd_095 : 51.569 32.995 15.465 10.921 MuHd_100 : 47.450 28.245 13.706 9.904 MuHd_105 : 32.454 17.453 9.161 6.523 Hmax_075 : 4.700 4.600 1.388 1.570 Hmax_095 : 13.900 15.838 2.519 4.979 Hmax_100 : 14.600 14.700 3.146 5.250 Hmax_105 : 6.700 11.600 0.269 2.400 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1748 0.8252 DFMC : 0.1624 0.8376 This protein is probably imported in chloroplast. f(Ser) = 0.1429 f(Arg) = 0.0357 CMi = 1.19048 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 479 PY17X_0837800 MIGKKINYLLGNTLKKSSRKYSTSNLINEIKNQPLTKITELSNKMKVATIQNNCEVPTIGLWISSGSKYENKMNNGVAHF 80 LEHMIFKGTHKRNRIQLEKEIENMGAHLNAYTAREQTGYYFKCFKDDVKWCIELLSDILTNSIFDEQLIEMEKHVILREM 160 EEVEKSTDEIIFDKLHMTAFRDHPLGYTILGPIENIKNMKKNDILNYIQKNYTSDRMVLCAVGNVNHDNIVKLAEQHFSN 240 IKPQDEKGLIFKKEFDKIKPFFCGSEIIMRDDDSGPNAHVAVAFEGVPWTSSDSITFMLMQCIIGTYRKNEEGIVPGKLS 320 ANRTINNISNKMTVGCADYFTSFNTCYNNTGLFGFYVQCDELAVEHAVGELMFGITSLSYSITDEEVELAKIHLKTQLIS 400 MFESSSTLAEEISRQILVYGRPISLAEFIIRLNEIDAEEVKRVAWKYLHDRDIAVAAMGALHGMPQYFDLRQKTYWLRY 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

  • Fasta :-

    >PY17X_0837800 ATGATAGGAAAAAAAATTAATTATCTCTTGGGTAATACACTCAAGAAATCTTCTAGAAAA TATAGTACATCTAATTTAATAAATGAAATAAAAAATCAACCTTTAACTAAAATTACAGAA TTATCAAATAAAATGAAAGTAGCAACAATACAAAATAATTGTGAAGTTCCTACAATTGGA TTATGGATAAGTAGTGGAAGCAAATATGAAAATAAAATGAATAATGGAGTAGCCCATTTT TTAGAACATATGATTTTTAAGGGAACACATAAAAGAAATAGAATCCAATTAGAAAAAGAA ATTGAAAATATGGGAGCACATCTAAATGCATATACTGCTAGAGAACAAACAGGATATTAT TTTAAATGTTTTAAAGATGATGTTAAATGGTGTATTGAATTATTAAGTGATATATTAACG AATAGTATATTTGATGAGCAGCTTATAGAAATGGAAAAACATGTTATTTTAAGAGAAATG GAAGAAGTTGAAAAATCAACAGATGAAATTATTTTTGATAAATTACACATGACTGCATTT AGAGATCATCCATTAGGATATACTATTTTAGGTCCAATTGAAAATATAAAAAATATGAAA AAAAATGATATATTAAATTATATTCAAAAAAATTATACATCTGATAGAATGGTTTTATGT GCCGTTGGTAATGTAAATCATGATAATATTGTCAAGTTAGCAGAACAACATTTTTCTAAT ATTAAACCACAAGATGAAAAGGGTCTTATTTTTAAAAAAGAATTTGATAAAATAAAACCA TTTTTTTGTGGATCAGAAATTATAATGAGAGATGATGATTCAGGACCAAATGCTCATGTA GCTGTAGCTTTTGAAGGTGTTCCTTGGACTTCTTCAGATTCTATCACATTTATGTTAATG CAATGTATAATAGGAACGTACAGAAAAAATGAAGAAGGTATTGTACCTGGCAAATTATCA GCAAATAGAACTATTAATAATATATCTAATAAAATGACTGTAGGATGTGCTGATTATTTT ACATCTTTTAATACATGCTATAACAATACTGGCTTATTTGGTTTTTATGTACAATGTGAT GAATTAGCTGTTGAACATGCAGTTGGTGAATTAATGTTTGGAATCACATCTTTAAGTTAT TCTATAACTGATGAAGAAGTTGAACTAGCCAAAATACATCTAAAAACACAACTTATTAGT ATGTTTGAATCATCATCAACATTAGCAGAAGAAATATCAAGACAAATACTTGTATATGGT CGCCCAATTTCTTTAGCAGAATTTATTATTAGATTAAATGAAATAGATGCTGAAGAAGTT AAAAGAGTTGCTTGGAAATATTTACACGATCGTGATATAGCAGTTGCTGCAATGGGCGCT TTACATGGCATGCCTCAATATTTTGATCTCAGACAAAAAACATACTGGCTTCGATATTAA
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  • Fasta :-

    MIGKKINYLLGNTLKKSSRKYSTSNLINEIKNQPLTKITELSNKMKVATIQNNCEVPTIG LWISSGSKYENKMNNGVAHFLEHMIFKGTHKRNRIQLEKEIENMGAHLNAYTAREQTGYY FKCFKDDVKWCIELLSDILTNSIFDEQLIEMEKHVILREMEEVEKSTDEIIFDKLHMTAF RDHPLGYTILGPIENIKNMKKNDILNYIQKNYTSDRMVLCAVGNVNHDNIVKLAEQHFSN IKPQDEKGLIFKKEFDKIKPFFCGSEIIMRDDDSGPNAHVAVAFEGVPWTSSDSITFMLM QCIIGTYRKNEEGIVPGKLSANRTINNISNKMTVGCADYFTSFNTCYNNTGLFGFYVQCD ELAVEHAVGELMFGITSLSYSITDEEVELAKIHLKTQLISMFESSSTLAEEISRQILVYG RPISLAEFIIRLNEIDAEEVKRVAWKYLHDRDIAVAAMGALHGMPQYFDLRQKTYWLRY

    No Results
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No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_0837800381 SSLSYSITDE0.997unspPY17X_0837800381 SSLSYSITDE0.997unspPY17X_0837800381 SSLSYSITDE0.997unspPY17X_083780018 SLKKSSRKYS0.994unspPY17X_083780022 SSRKYSTSNL0.993unsp
PY17X_0837800


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India