PY17X_0916500 | apical membrane antigen 1

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:  GO:0009405      

  • Computed_GO_Processes:  pathogenesis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:  GO:0005515      

  • Curated_GO_Functions:  protein binding      

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >PY17X_0916500 MKEIYYIFILCSIYLINLSYCSEGPNQVISEDGNINYESIPKENTERSIKLINPWDKYME KYDIEKVHGSGIRVDLGEDARVENRDYRIPSGKCPVIGKGITIQNSEVSFLKPVATGDKP VRSGGLAFPETDVHISPITITNLKTMYKDHQDIVNLNDMSLCAKHTSLYVPGKDATSAYR HPVVYDKSNSTCYMLYVAAQENMGPRYCSNDANNENQPFCFTPEKIENYKDLSYLTKNLR DDWETSCPNKSIKNAKFGIWVDGYCTDYQKHVVHDSDSLLKCNQIIFNESASDQPKQYER HLEDATKIRQGIVERNGKLIGEALLPIGSYKSGQIKSHGKGYNWGNYDSKNNKCYIFETK PTCLINDKNFIATTALSSTEEFEENFPCEIYKNKIAEEIKVLNLNQNTSNGNNSIKFPRI FISTDKNSLNCPCDPTKLTESTCEFYVCSCVEQRQYIAENNDVIIKEEFIGDYENPKQKL LIIIVLIGVGIIIVILLVAYYFKSGKKGENYDRMGQADDYGKSKSRKDEMLDPEVSFWGE DKRASHTTPVLMEKPYY
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_0916500.fa Sequence name : PY17X_0916500 Sequence length : 557 VALUES OF COMPUTED PARAMETERS Coef20 : 4.119 CoefTot : -0.406 ChDiff : -10 ZoneTo : 22 KR : 1 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.694 3.729 0.755 1.168 MesoH : -0.812 0.571 -0.321 0.271 MuHd_075 : 17.489 10.291 5.531 4.106 MuHd_095 : 22.832 14.858 7.377 3.653 MuHd_100 : 24.833 15.469 7.576 3.850 MuHd_105 : 19.346 10.543 5.457 2.725 Hmax_075 : 17.617 21.933 4.173 7.887 Hmax_095 : 18.700 21.800 5.650 6.610 Hmax_100 : 20.900 23.800 5.557 7.130 Hmax_105 : 17.675 19.688 4.548 6.466 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9993 0.0007 DFMC : 0.9996 0.0004
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 557 PY17X_0916500 MKEIYYIFILCSIYLINLSYCSEGPNQVISEDGNINYESIPKENTERSIKLINPWDKYMEKYDIEKVHGSGIRVDLGEDA 80 RVENRDYRIPSGKCPVIGKGITIQNSEVSFLKPVATGDKPVRSGGLAFPETDVHISPITITNLKTMYKDHQDIVNLNDMS 160 LCAKHTSLYVPGKDATSAYRHPVVYDKSNSTCYMLYVAAQENMGPRYCSNDANNENQPFCFTPEKIENYKDLSYLTKNLR 240 DDWETSCPNKSIKNAKFGIWVDGYCTDYQKHVVHDSDSLLKCNQIIFNESASDQPKQYERHLEDATKIRQGIVERNGKLI 320 GEALLPIGSYKSGQIKSHGKGYNWGNYDSKNNKCYIFETKPTCLINDKNFIATTALSSTEEFEENFPCEIYKNKIAEEIK 400 VLNLNQNTSNGNNSIKFPRIFISTDKNSLNCPCDPTKLTESTCEFYVCSCVEQRQYIAENNDVIIKEEFIGDYENPKQKL 480 LIIIVLIGVGIIIVILLVAYYFKSGKKGENYDRMGQADDYGKSKSRKDEMLDPEVSFWGEDKRASHTTPVLMEKPYY 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............................................................................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_0916500 2 -----MK|EI 0.068 . PY17X_0916500 42 NYESIPK|EN 0.053 . PY17X_0916500 47 PKENTER|SI 0.126 . PY17X_0916500 50 NTERSIK|LI 0.124 . PY17X_0916500 57 LINPWDK|YM 0.077 . PY17X_0916500 61 WDKYMEK|YD 0.071 . PY17X_0916500 66 EKYDIEK|VH 0.064 . PY17X_0916500 73 VHGSGIR|VD 0.069 . PY17X_0916500 81 DLGEDAR|VE 0.068 . PY17X_0916500 85 DARVENR|DY 0.088 . PY17X_0916500 88 VENRDYR|IP 0.263 . PY17X_0916500 93 YRIPSGK|CP 0.069 . PY17X_0916500 99 KCPVIGK|GI 0.072 . PY17X_0916500 112 SEVSFLK|PV 0.077 . PY17X_0916500 119 PVATGDK|PV 0.077 . PY17X_0916500 122 TGDKPVR|SG 0.147 . PY17X_0916500 144 ITITNLK|TM 0.054 . PY17X_0916500 148 NLKTMYK|DH 0.072 . PY17X_0916500 164 DMSLCAK|HT 0.082 . PY17X_0916500 173 SLYVPGK|DA 0.103 . PY17X_0916500 180 DATSAYR|HP 0.070 . PY17X_0916500 187 HPVVYDK|SN 0.096 . PY17X_0916500 206 QENMGPR|YC 0.106 . PY17X_0916500 225 FCFTPEK|IE 0.057 . PY17X_0916500 230 EKIENYK|DL 0.077 . PY17X_0916500 237 DLSYLTK|NL 0.074 . PY17X_0916500 240 YLTKNLR|DD 0.070 . PY17X_0916500 250 ETSCPNK|SI 0.101 . PY17X_0916500 253 CPNKSIK|NA 0.089 . PY17X_0916500 256 KSIKNAK|FG 0.082 . PY17X_0916500 270 YCTDYQK|HV 0.062 . PY17X_0916500 281 DSDSLLK|CN 0.060 . PY17X_0916500 296 SASDQPK|QY 0.096 . PY17X_0916500 300 QPKQYER|HL 0.128 . PY17X_0916500 307 HLEDATK|IR 0.062 . PY17X_0916500 309 EDATKIR|QG 0.103 . PY17X_0916500 315 RQGIVER|NG 0.081 . PY17X_0916500 318 IVERNGK|LI 0.146 . PY17X_0916500 331 LPIGSYK|SG 0.088 . PY17X_0916500 336 YKSGQIK|SH 0.145 . PY17X_0916500 340 QIKSHGK|GY 0.075 . PY17X_0916500 350 WGNYDSK|NN 0.066 . PY17X_0916500 353 YDSKNNK|CY 0.069 . PY17X_0916500 360 CYIFETK|PT 0.063 . PY17X_0916500 368 TCLINDK|NF 0.057 . PY17X_0916500 392 FPCEIYK|NK 0.071 . PY17X_0916500 394 CEIYKNK|IA 0.078 . PY17X_0916500 400 KIAEEIK|VL 0.063 . PY17X_0916500 416 NGNNSIK|FP 0.077 . PY17X_0916500 419 NSIKFPR|IF 0.096 . PY17X_0916500 426 IFISTDK|NS 0.055 . PY17X_0916500 437 CPCDPTK|LT 0.063 . PY17X_0916500 454 CSCVEQR|QY 0.104 . PY17X_0916500 466 NNDVIIK|EE 0.059 . PY17X_0916500 477 GDYENPK|QK 0.060 . PY17X_0916500 479 YENPKQK|LL 0.070 . PY17X_0916500 503 LVAYYFK|SG 0.091 . PY17X_0916500 506 YYFKSGK|KG 0.062 . PY17X_0916500 507 YFKSGKK|GE 0.081 . PY17X_0916500 513 KGENYDR|MG 0.076 . PY17X_0916500 522 QADDYGK|SK 0.084 . PY17X_0916500 524 DDYGKSK|SR 0.081 . PY17X_0916500 526 YGKSKSR|KD 0.084 . PY17X_0916500 527 GKSKSRK|DE 0.124 . PY17X_0916500 542 SFWGEDK|RA 0.071 . PY17X_0916500 543 FWGEDKR|AS 0.191 . PY17X_0916500 554 TPVLMEK|PY 0.069 . ____________________________^_________________

  • Fasta :-

    >PY17X_0916500 ATGAAAGAAATATATTATATATTTATTTTATGCTCTATTTATCTAATAAACCTGAGTTAT TGTTCCGAAGGTCCAAATCAAGTTATTTCAGAAGATGGCAATATTAATTATGAATCAATT CCAAAGGAAAATACTGAAAGAAGTATTAAATTAATTAATCCATGGGATAAATATATGGAA AAATATGATATAGAAAAGGTGCATGGTTCTGGTATAAGAGTCGATTTAGGTGAAGATGCA CGGGTGGAAAATCGAGATTATAGAATACCATCAGGTAAATGCCCAGTTATAGGAAAAGGT ATAACTATTCAAAATTCTGAAGTATCATTTTTAAAACCAGTAGCTACCGGTGATAAGCCA GTAAGAAGTGGAGGATTGGCATTTCCTGAAACAGATGTACACATTTCTCCTATAACAATT ACCAATCTAAAAACAATGTATAAGGACCATCAAGACATAGTAAATTTAAATGATATGTCA TTGTGTGCAAAACATACCTCACTTTATGTTCCCGGTAAAGATGCCACATCAGCATATAGA CATCCCGTTGTTTATGATAAATCTAATAGTACTTGTTACATGTTGTATGTAGCAGCACAA GAAAATATGGGTCCAAGATATTGTAGTAATGATGCAAATAATGAGAATCAACCATTTTGT TTTACACCCGAAAAAATAGAAAATTATAAAGATTTATCTTATTTAACTAAAAATTTGCGT GATGATTGGGAAACCAGTTGTCCTAATAAAAGTATAAAAAATGCTAAATTTGGAATCTGG GTTGATGGTTATTGTACAGATTATCAAAAGCACGTAGTTCATGATAGTGATTCATTATTA AAATGTAATCAAATCATTTTTAACGAAAGTGCTTCTGATCAACCTAAACAATATGAAAGA CACCTAGAAGATGCTACCAAAATTCGACAAGGAATTGTAGAGAGAAATGGTAAACTTATA GGTGAAGCTTTATTACCAATAGGATCTTATAAATCAGGTCAAATTAAAAGTCATGGAAAG GGATATAACTGGGGAAATTATGATAGTAAAAACAATAAATGTTACATTTTCGAAACAAAA CCAACATGTTTAATTAATGATAAGAATTTTATTGCAACAACTGCTTTATCTAGTACTGAA GAATTCGAAGAAAATTTTCCTTGTGAAATATATAAAAATAAAATAGCCGAAGAAATTAAA GTATTAAACTTAAACCAAAACACCTCTAATGGAAATAATTCCATTAAATTTCCTAGGATA TTTATTTCAACTGACAAAAATAGTTTAAATTGTCCATGTGATCCTACGAAATTGACTGAA AGTACTTGTGAATTTTATGTGTGTAGTTGTGTAGAGCAAAGACAATATATAGCTGAGAAT AATGATGTTATAATAAAAGAAGAGTTTATAGGTGACTATGAAAACCCAAAACAGAAATTA TTAATTATTATAGTTTTGATTGGTGTTGGAATTATAATAGTCATTCTATTAGTGGCTTAT TACTTTAAAAGTGGCAAAAAAGGTGAAAATTATGATAGAATGGGTCAAGCAGATGATTAT GGTAAATCTAAATCCAGAAAAGATGAAATGTTAGATCCAGAAGTGTCATTTTGGGGTGAA GATAAAAGGGCATCACACACAACACCCGTTTTGATGGAAAAACCATATTATTAA
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  • Fasta :-

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_0916500251 SCPNKSIKNA0.991unspPY17X_0916500251 SCPNKSIKNA0.991unspPY17X_0916500251 SCPNKSIKNA0.991unspPY17X_0916500290 SIFNESASDQ0.994unspPY17X_0916500378 STALSSTEEF0.997unspPY17X_0916500525 SGKSKSRKDE0.998unspPY17X_0916500545 SDKRASHTTP0.991unspPY17X_091650091 SYRIPSGKCP0.995unspPY17X_0916500177 SKDATSAYRH0.994unsp
PY17X_0916500


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India