PY17X_0932900 | ubiquitin carboxyl-terminal hydrolase UCH54, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_0932900OTHER0.9999870.0000090.000004
No Results

  • Fasta :-

    >PY17X_0932900 MQSENDSIGEWCLIESNPCIFYEMLKQMGAKNLSAEDVYDLDHFDNYINNKDEIKIEHIL SIQEYRSEKEKEAGLKSKMETEPYNSDIDLEDKYNKLLNNFSHVFGIIFLFNIGKSYDRK KYKEHNIPENLFFAKQVIPNACATQAILSIIFNKNIKLNENIENIKTFSINFDSTMKGLT LSNCNFLRNIHNSFKTPVYIENDDLYHNKKKESNSFHFVSYIEFEKNVYLLDGLQEGPIL ITDKNDDEKKEIENNWINIARNHIKKDINIMSNSEDDTENRFNILAIIKDKECIINEYIN IHRIFKQRISVKLISLGENIEFDDEINEDDYYFSNKIPSIDQLTSNIEKLHNILKKSSNE INFLENLLTKEIELKASWDKERTFKFYNFYPFIISSIDLMAKHKILKPSYEKEKQKRNN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_0932900.fa Sequence name : PY17X_0932900 Sequence length : 419 VALUES OF COMPUTED PARAMETERS Coef20 : 3.364 CoefTot : -0.043 ChDiff : -14 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.135 1.494 0.117 0.645 MesoH : -0.882 0.079 -0.537 0.135 MuHd_075 : 22.191 14.284 7.804 3.690 MuHd_095 : 14.360 9.664 5.186 1.993 MuHd_100 : 11.252 7.133 3.535 2.496 MuHd_105 : 7.779 4.700 1.852 2.810 Hmax_075 : 4.100 8.517 0.723 4.387 Hmax_095 : 2.888 3.938 -0.349 1.934 Hmax_100 : 1.200 0.700 -0.848 2.070 Hmax_105 : 3.700 4.100 -1.809 3.450 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9854 0.0146 DFMC : 0.9814 0.0186
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 419 PY17X_0932900 MQSENDSIGEWCLIESNPCIFYEMLKQMGAKNLSAEDVYDLDHFDNYINNKDEIKIEHILSIQEYRSEKEKEAGLKSKME 80 TEPYNSDIDLEDKYNKLLNNFSHVFGIIFLFNIGKSYDRKKYKEHNIPENLFFAKQVIPNACATQAILSIIFNKNIKLNE 160 NIENIKTFSINFDSTMKGLTLSNCNFLRNIHNSFKTPVYIENDDLYHNKKKESNSFHFVSYIEFEKNVYLLDGLQEGPIL 240 ITDKNDDEKKEIENNWINIARNHIKKDINIMSNSEDDTENRFNILAIIKDKECIINEYINIHRIFKQRISVKLISLGENI 320 EFDDEINEDDYYFSNKIPSIDQLTSNIEKLHNILKKSSNEINFLENLLTKEIELKASWDKERTFKFYNFYPFIISSIDLM 400 AKHKILKPSYEKEKQKRNN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_0932900 26 IFYEMLK|QM 0.066 . PY17X_0932900 31 LKQMGAK|NL 0.080 . PY17X_0932900 51 DNYINNK|DE 0.086 . PY17X_0932900 55 NNKDEIK|IE 0.060 . PY17X_0932900 66 LSIQEYR|SE 0.168 . PY17X_0932900 69 QEYRSEK|EK 0.189 . PY17X_0932900 71 YRSEKEK|EA 0.103 . PY17X_0932900 76 EKEAGLK|SK 0.083 . PY17X_0932900 78 EAGLKSK|ME 0.065 . PY17X_0932900 93 DIDLEDK|YN 0.055 . PY17X_0932900 96 LEDKYNK|LL 0.059 . PY17X_0932900 115 FLFNIGK|SY 0.078 . PY17X_0932900 119 IGKSYDR|KK 0.075 . PY17X_0932900 120 GKSYDRK|KY 0.091 . PY17X_0932900 121 KSYDRKK|YK 0.171 . PY17X_0932900 123 YDRKKYK|EH 0.074 . PY17X_0932900 135 ENLFFAK|QV 0.087 . PY17X_0932900 154 LSIIFNK|NI 0.071 . PY17X_0932900 157 IFNKNIK|LN 0.072 . PY17X_0932900 166 ENIENIK|TF 0.065 . PY17X_0932900 177 NFDSTMK|GL 0.059 . PY17X_0932900 188 SNCNFLR|NI 0.159 . PY17X_0932900 195 NIHNSFK|TP 0.065 . PY17X_0932900 209 DDLYHNK|KK 0.065 . PY17X_0932900 210 DLYHNKK|KE 0.110 . PY17X_0932900 211 LYHNKKK|ES 0.105 . PY17X_0932900 226 SYIEFEK|NV 0.062 . PY17X_0932900 244 PILITDK|ND 0.060 . PY17X_0932900 249 DKNDDEK|KE 0.060 . PY17X_0932900 250 KNDDEKK|EI 0.107 . PY17X_0932900 261 NWINIAR|NH 0.092 . PY17X_0932900 265 IARNHIK|KD 0.075 . PY17X_0932900 266 ARNHIKK|DI 0.195 . PY17X_0932900 281 EDDTENR|FN 0.077 . PY17X_0932900 289 NILAIIK|DK 0.067 . PY17X_0932900 291 LAIIKDK|EC 0.065 . PY17X_0932900 303 EYINIHR|IF 0.075 . PY17X_0932900 306 NIHRIFK|QR 0.108 . PY17X_0932900 308 HRIFKQR|IS 0.111 . PY17X_0932900 312 KQRISVK|LI 0.091 . PY17X_0932900 336 DYYFSNK|IP 0.067 . PY17X_0932900 349 LTSNIEK|LH 0.061 . PY17X_0932900 355 KLHNILK|KS 0.068 . PY17X_0932900 356 LHNILKK|SS 0.214 . PY17X_0932900 370 LENLLTK|EI 0.068 . PY17X_0932900 375 TKEIELK|AS 0.087 . PY17X_0932900 380 LKASWDK|ER 0.062 . PY17X_0932900 382 ASWDKER|TF 0.089 . PY17X_0932900 385 DKERTFK|FY 0.152 . PY17X_0932900 402 SIDLMAK|HK 0.061 . PY17X_0932900 404 DLMAKHK|IL 0.069 . PY17X_0932900 407 AKHKILK|PS 0.076 . PY17X_0932900 412 LKPSYEK|EK 0.054 . PY17X_0932900 414 PSYEKEK|QK 0.067 . PY17X_0932900 416 YEKEKQK|RN 0.066 . PY17X_0932900 417 EKEKQKR|NN 0.206 . ____________________________^_________________

  • Fasta :-

    >PY17X_0932900 ATGCAAAGTGAAAATGATAGCATTGGGGAATGGTGCTTAATTGAGAGTAATCCCTGCATA TTTTATGAGATGTTAAAACAGATGGGAGCAAAAAATTTATCAGCAGAAGATGTATATGAT TTAGATCATTTTGATAATTATATAAATAATAAAGATGAAATAAAAATTGAACATATATTA AGCATACAAGAATACAGAAGTGAAAAAGAAAAAGAAGCAGGTTTAAAGTCAAAAATGGAA ACAGAACCATATAATAGTGACATAGATTTAGAAGATAAATATAATAAGCTTTTAAATAAT TTTTCTCATGTATTTGGAATAATATTTTTATTTAATATTGGAAAAAGTTATGATCGAAAA AAATATAAAGAACATAATATTCCTGAAAATTTATTTTTTGCTAAACAAGTCATTCCGAAT GCATGTGCAACACAAGCTATATTATCTATTATATTTAATAAAAATATAAAATTAAATGAA AATATAGAAAATATAAAAACGTTTAGTATAAATTTTGATAGTACTATGAAAGGGTTAACA TTATCTAATTGTAATTTTTTACGAAATATTCATAATTCTTTTAAAACGCCAGTATATATA GAAAATGATGATTTATATCATAACAAAAAAAAAGAATCAAATTCTTTTCATTTTGTATCA TATATTGAATTTGAAAAAAATGTATATTTATTAGATGGGTTACAAGAAGGCCCAATATTA ATTACTGATAAAAATGATGATGAAAAAAAAGAAATAGAAAATAACTGGATAAATATAGCA CGAAATCATATAAAAAAAGATATAAACATTATGAGCAATAGTGAAGATGATACAGAAAAT CGATTTAATATTTTGGCAATAATAAAAGATAAGGAATGTATAATTAATGAATATATAAAT ATACATAGAATATTTAAACAAAGAATAAGTGTTAAACTAATAAGTTTAGGAGAAAATATA GAATTCGATGATGAAATAAATGAAGATGATTATTATTTTTCTAATAAAATACCTAGTATT GATCAACTTACATCTAATATTGAAAAATTACATAATATTTTAAAAAAATCATCTAATGAA ATTAATTTTTTAGAAAATCTTTTGACTAAAGAAATAGAACTTAAAGCTTCTTGGGATAAA GAACGAACTTTTAAATTTTATAATTTTTACCCTTTCATAATATCTTCAATCGATTTAATG GCTAAACATAAAATCTTGAAACCGTCTTACGAAAAAGAAAAACAAAAACGAAATAATTGA
  • Download Fasta

  • Fasta :-

    MQSENDSIGEWCLIESNPCIFYEMLKQMGAKNLSAEDVYDLDHFDNYINNKDEIKIEHIL SIQEYRSEKEKEAGLKSKMETEPYNSDIDLEDKYNKLLNNFSHVFGIIFLFNIGKSYDRK KYKEHNIPENLFFAKQVIPNACATQAILSIIFNKNIKLNENIENIKTFSINFDSTMKGLT LSNCNFLRNIHNSFKTPVYIENDDLYHNKKKESNSFHFVSYIEFEKNVYLLDGLQEGPIL ITDKNDDEKKEIENNWINIARNHIKKDINIMSNSEDDTENRFNILAIIKDKECIINEYIN IHRIFKQRISVKLISLGENIEFDDEINEDDYYFSNKIPSIDQLTSNIEKLHNILKKSSNE INFLENLLTKEIELKASWDKERTFKFYNFYPFIISSIDLMAKHKILKPSYEKEKQKRNN

  • title: catalytic site
  • coordinates: Q136,C142,H217,D232
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_093290086 SEPYNSDIDL0.996unspPY17X_093290086 SEPYNSDIDL0.996unspPY17X_093290086 SEPYNSDIDL0.996unspPY17X_0932900310 SKQRISVKLI0.991unspPY17X_0932900409 SILKPSYEKE0.991unspPY17X_093290034 SAKNLSAEDV0.992unspPY17X_093290067 SQEYRSEKEK0.998unsp
PY17X_0932900


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India