_IDPredictionOTHERSPmTPCS_Position
PY17X_0933200SP0.1517900.8322350.015976CS pos: 28-29. VFA-SN. Pr: 0.8416
No Results
  • Fasta :-

    >PY17X_0933200 MVQNIVKNYLFVIVLLLSVLKVDITVFASNNNNNNIQENFLNRTINTLNSGRNIAKRYGH NQLKPVHILKSIIKSEYGLNLFKSNNIDLGNLKEYTDAALEQTRAGAPLDNKTIVINSEA TNEVLAEAKAIAKKYKSPKVDIEHILYGLMSDELVSEIFGEIYLTEDSIKEILKNKFEKA TKTKEKKTTGLNIEQFGSNLNEKVRSGKLQGIYGRDEEIRAIIESLLRYNKNSPVLVGQP GTGKTTIVEGLAYRIEKGDVPKELLGYTIISLNFRKFTAGTSYRGEFENRMKNIIKELKN KKNKIILFVDEIHLLLGAGKAEGGVDAANLLKPVLSKGEIKLIGATTVTEYRKYIESCSA FERRFEKVIVEPPSVETAIKILRSLKSKYEKFYGINITDKALVAAVKVSDKFIKDRFLPD KAIDLLNKACSFLQVQLSGKPRVIDLTERYIERLAYEISTLERDVDKVSKKKYSSLVEEF ELKKEELKKYYEEYVTTGERLKRKKEVEKKLNELKDIAQNYINAGQEPPTELQESLNEAQ KQFVEIYKNTVAYVEEKTHNAMNVDSLYQEHVSYIYLRDSGMPLGSLSFESSKGALKLYN SLSQSIIGNEDIIKSLSDAVVKAATGMKDPEKPIGTFLFLGPTGVGKTELAKTLAIELFN SKNNLIRVNMSEFTEAHSVSKITGSPPGYVGFSDSGQLTEAVRERPHSVVLFDELEKAHP DVFKVLLQILGDGYINDNHRRNIDFSNTIIIMTSNLGADLFKKQFFFDADNSNTQEYKRL FEDLRIQLIKKCKKVFKPEFVNRIDKIGIFEPLSKKNLHKIVKLRFKKLEKRLEEKNISI DVSDRAIDYIIDQSYDPELGARPTLIFIESVIMTKFAVMYLEKELIDDMDVYVDYNKTIN NIVINLSLS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_0933200.fa Sequence name : PY17X_0933200 Sequence length : 909 VALUES OF COMPUTED PARAMETERS Coef20 : 4.534 CoefTot : -2.690 ChDiff : 11 ZoneTo : 75 KR : 9 DE : 2 CleavSite : 62 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.271 2.524 0.211 0.734 MesoH : -0.503 0.269 -0.402 0.197 MuHd_075 : 49.224 26.637 11.829 11.591 MuHd_095 : 44.506 26.662 14.131 9.916 MuHd_100 : 41.707 25.982 12.364 8.919 MuHd_105 : 50.237 32.333 15.742 10.582 Hmax_075 : 8.050 7.933 0.209 3.488 Hmax_095 : 6.388 15.200 0.614 4.016 Hmax_100 : 14.600 11.100 2.282 4.700 Hmax_105 : 15.800 14.933 2.988 5.425 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2414 0.7586 DFMC : 0.4755 0.5245 This protein is probably imported in mitochondria. f(Ser) = 0.0667 f(Arg) = 0.0400 CMi = 0.52910 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 909 PY17X_0933200 MVQNIVKNYLFVIVLLLSVLKVDITVFASNNNNNNIQENFLNRTINTLNSGRNIAKRYGHNQLKPVHILKSIIKSEYGLN 80 LFKSNNIDLGNLKEYTDAALEQTRAGAPLDNKTIVINSEATNEVLAEAKAIAKKYKSPKVDIEHILYGLMSDELVSEIFG 160 EIYLTEDSIKEILKNKFEKATKTKEKKTTGLNIEQFGSNLNEKVRSGKLQGIYGRDEEIRAIIESLLRYNKNSPVLVGQP 240 GTGKTTIVEGLAYRIEKGDVPKELLGYTIISLNFRKFTAGTSYRGEFENRMKNIIKELKNKKNKIILFVDEIHLLLGAGK 320 AEGGVDAANLLKPVLSKGEIKLIGATTVTEYRKYIESCSAFERRFEKVIVEPPSVETAIKILRSLKSKYEKFYGINITDK 400 ALVAAVKVSDKFIKDRFLPDKAIDLLNKACSFLQVQLSGKPRVIDLTERYIERLAYEISTLERDVDKVSKKKYSSLVEEF 480 ELKKEELKKYYEEYVTTGERLKRKKEVEKKLNELKDIAQNYINAGQEPPTELQESLNEAQKQFVEIYKNTVAYVEEKTHN 560 AMNVDSLYQEHVSYIYLRDSGMPLGSLSFESSKGALKLYNSLSQSIIGNEDIIKSLSDAVVKAATGMKDPEKPIGTFLFL 640 GPTGVGKTELAKTLAIELFNSKNNLIRVNMSEFTEAHSVSKITGSPPGYVGFSDSGQLTEAVRERPHSVVLFDELEKAHP 720 DVFKVLLQILGDGYINDNHRRNIDFSNTIIIMTSNLGADLFKKQFFFDADNSNTQEYKRLFEDLRIQLIKKCKKVFKPEF 800 VNRIDKIGIFEPLSKKNLHKIVKLRFKKLEKRLEEKNISIDVSDRAIDYIIDQSYDPELGARPTLIFIESVIMTKFAVMY 880 LEKELIDDMDVYVDYNKTINNIVINLSLS 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ............................. 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_0933200 7 MVQNIVK|NY 0.058 . PY17X_0933200 21 LLLSVLK|VD 0.057 . PY17X_0933200 43 QENFLNR|TI 0.097 . PY17X_0933200 52 NTLNSGR|NI 0.079 . PY17X_0933200 56 SGRNIAK|RY 0.076 . PY17X_0933200 57 GRNIAKR|YG 0.385 . PY17X_0933200 64 YGHNQLK|PV 0.084 . PY17X_0933200 70 KPVHILK|SI 0.129 . PY17X_0933200 74 ILKSIIK|SE 0.067 . PY17X_0933200 83 YGLNLFK|SN 0.070 . PY17X_0933200 93 IDLGNLK|EY 0.058 . PY17X_0933200 104 AALEQTR|AG 0.073 . PY17X_0933200 112 GAPLDNK|TI 0.054 . PY17X_0933200 129 EVLAEAK|AI 0.067 . PY17X_0933200 133 EAKAIAK|KY 0.057 . PY17X_0933200 134 AKAIAKK|YK 0.171 . PY17X_0933200 136 AIAKKYK|SP 0.101 . PY17X_0933200 139 KKYKSPK|VD 0.069 . PY17X_0933200 170 LTEDSIK|EI 0.062 . PY17X_0933200 174 SIKEILK|NK 0.059 . PY17X_0933200 176 KEILKNK|FE 0.062 . PY17X_0933200 179 LKNKFEK|AT 0.102 . PY17X_0933200 182 KFEKATK|TK 0.068 . PY17X_0933200 184 EKATKTK|EK 0.071 . PY17X_0933200 186 ATKTKEK|KT 0.068 . PY17X_0933200 187 TKTKEKK|TT 0.141 . PY17X_0933200 203 GSNLNEK|VR 0.076 . PY17X_0933200 205 NLNEKVR|SG 0.126 . PY17X_0933200 208 EKVRSGK|LQ 0.180 . PY17X_0933200 215 LQGIYGR|DE 0.093 . PY17X_0933200 220 GRDEEIR|AI 0.124 . PY17X_0933200 228 IIESLLR|YN 0.071 . PY17X_0933200 231 SLLRYNK|NS 0.089 . PY17X_0933200 244 GQPGTGK|TT 0.062 . PY17X_0933200 254 VEGLAYR|IE 0.068 . PY17X_0933200 257 LAYRIEK|GD 0.139 . PY17X_0933200 262 EKGDVPK|EL 0.066 . PY17X_0933200 275 IISLNFR|KF 0.109 . PY17X_0933200 276 ISLNFRK|FT 0.080 . PY17X_0933200 284 TAGTSYR|GE 0.103 . PY17X_0933200 290 RGEFENR|MK 0.088 . PY17X_0933200 292 EFENRMK|NI 0.071 . PY17X_0933200 296 RMKNIIK|EL 0.063 . PY17X_0933200 299 NIIKELK|NK 0.057 . PY17X_0933200 301 IKELKNK|KN 0.068 . PY17X_0933200 302 KELKNKK|NK 0.084 . PY17X_0933200 304 LKNKKNK|II 0.075 . PY17X_0933200 320 LLLGAGK|AE 0.067 . PY17X_0933200 332 DAANLLK|PV 0.068 . PY17X_0933200 337 LKPVLSK|GE 0.066 . PY17X_0933200 341 LSKGEIK|LI 0.080 . PY17X_0933200 352 TTVTEYR|KY 0.084 . PY17X_0933200 353 TVTEYRK|YI 0.086 . PY17X_0933200 363 SCSAFER|RF 0.127 . PY17X_0933200 364 CSAFERR|FE 0.171 . PY17X_0933200 367 FERRFEK|VI 0.114 . PY17X_0933200 380 SVETAIK|IL 0.058 . PY17X_0933200 383 TAIKILR|SL 0.116 . PY17X_0933200 386 KILRSLK|SK 0.189 . PY17X_0933200 388 LRSLKSK|YE 0.079 . PY17X_0933200 391 LKSKYEK|FY 0.107 . PY17X_0933200 400 GINITDK|AL 0.074 . PY17X_0933200 407 ALVAAVK|VS 0.063 . PY17X_0933200 411 AVKVSDK|FI 0.065 . PY17X_0933200 414 VSDKFIK|DR 0.066 . PY17X_0933200 416 DKFIKDR|FL 0.114 . PY17X_0933200 421 DRFLPDK|AI 0.071 . PY17X_0933200 428 AIDLLNK|AC 0.064 . PY17X_0933200 440 QVQLSGK|PR 0.058 . PY17X_0933200 442 QLSGKPR|VI 0.143 . PY17X_0933200 449 VIDLTER|YI 0.084 . PY17X_0933200 453 TERYIER|LA 0.095 . PY17X_0933200 463 EISTLER|DV 0.209 . PY17X_0933200 467 LERDVDK|VS 0.066 . PY17X_0933200 470 DVDKVSK|KK 0.062 . PY17X_0933200 471 VDKVSKK|KY 0.111 . PY17X_0933200 472 DKVSKKK|YS 0.140 . PY17X_0933200 483 VEEFELK|KE 0.055 . PY17X_0933200 484 EEFELKK|EE 0.068 . PY17X_0933200 488 LKKEELK|KY 0.063 . PY17X_0933200 489 KKEELKK|YY 0.171 . PY17X_0933200 500 YVTTGER|LK 0.070 . PY17X_0933200 502 TTGERLK|RK 0.062 . PY17X_0933200 503 TGERLKR|KK 0.460 . PY17X_0933200 504 GERLKRK|KE 0.080 . PY17X_0933200 505 ERLKRKK|EV 0.256 . PY17X_0933200 509 RKKEVEK|KL 0.067 . PY17X_0933200 510 KKEVEKK|LN 0.093 . PY17X_0933200 515 KKLNELK|DI 0.071 . PY17X_0933200 541 SLNEAQK|QF 0.067 . PY17X_0933200 548 QFVEIYK|NT 0.062 . PY17X_0933200 557 VAYVEEK|TH 0.061 . PY17X_0933200 578 VSYIYLR|DS 0.146 . PY17X_0933200 593 LSFESSK|GA 0.070 . PY17X_0933200 597 SSKGALK|LY 0.056 . PY17X_0933200 614 GNEDIIK|SL 0.095 . PY17X_0933200 622 LSDAVVK|AA 0.070 . PY17X_0933200 628 KAATGMK|DP 0.080 . PY17X_0933200 632 GMKDPEK|PI 0.083 . PY17X_0933200 647 GPTGVGK|TE 0.060 . PY17X_0933200 652 GKTELAK|TL 0.067 . PY17X_0933200 662 IELFNSK|NN 0.055 . PY17X_0933200 667 SKNNLIR|VN 0.102 . PY17X_0933200 681 EAHSVSK|IT 0.072 . PY17X_0933200 703 QLTEAVR|ER 0.069 . PY17X_0933200 705 TEAVRER|PH 0.141 . PY17X_0933200 717 LFDELEK|AH 0.058 . PY17X_0933200 724 AHPDVFK|VL 0.074 . PY17X_0933200 740 YINDNHR|RN 0.083 . PY17X_0933200 741 INDNHRR|NI 0.184 . PY17X_0933200 762 LGADLFK|KQ 0.058 . PY17X_0933200 763 GADLFKK|QF 0.086 . PY17X_0933200 778 SNTQEYK|RL 0.068 . PY17X_0933200 779 NTQEYKR|LF 0.186 . PY17X_0933200 785 RLFEDLR|IQ 0.069 . PY17X_0933200 790 LRIQLIK|KC 0.073 . PY17X_0933200 791 RIQLIKK|CK 0.084 . PY17X_0933200 793 QLIKKCK|KV 0.090 . PY17X_0933200 794 LIKKCKK|VF 0.092 . PY17X_0933200 797 KCKKVFK|PE 0.070 . PY17X_0933200 803 KPEFVNR|ID 0.119 . PY17X_0933200 806 FVNRIDK|IG 0.097 . PY17X_0933200 815 IFEPLSK|KN 0.059 . PY17X_0933200 816 FEPLSKK|NL 0.090 . PY17X_0933200 820 SKKNLHK|IV 0.077 . PY17X_0933200 823 NLHKIVK|LR 0.065 . PY17X_0933200 825 HKIVKLR|FK 0.104 . PY17X_0933200 827 IVKLRFK|KL 0.070 . PY17X_0933200 828 VKLRFKK|LE 0.167 . PY17X_0933200 831 RFKKLEK|RL 0.062 . PY17X_0933200 832 FKKLEKR|LE 0.145 . PY17X_0933200 836 EKRLEEK|NI 0.068 . PY17X_0933200 845 SIDVSDR|AI 0.131 . PY17X_0933200 862 DPELGAR|PT 0.086 . PY17X_0933200 875 ESVIMTK|FA 0.068 . PY17X_0933200 883 AVMYLEK|EL 0.062 . PY17X_0933200 897 VYVDYNK|TI 0.059 . ____________________________^_________________
  • Fasta :-

    >PY17X_0933200 ATGGTACAGAACATTGTTAAAAATTATTTATTTGTCATCGTGTTGTTATTGTCTGTGCTC AAGGTTGATATAACAGTTTTCGCCTCTAATAATAATAATAATAATATTCAGGAGAATTTC TTGAATCGAACTATAAACACTTTAAATTCGGGACGAAATATTGCAAAACGATATGGCCAT AACCAATTAAAACCTGTGCACATTTTGAAGTCTATAATAAAGAGCGAATATGGACTAAAT TTATTTAAATCAAATAATATCGACTTGGGAAACTTGAAGGAATATACTGACGCTGCATTA GAGCAAACCAGAGCCGGGGCGCCCCTTGACAACAAGACAATTGTTATAAATTCTGAAGCA ACCAATGAAGTATTAGCAGAAGCTAAAGCTATCGCAAAAAAATACAAAAGCCCCAAAGTT GATATAGAGCATATATTATATGGTTTAATGAGTGACGAACTTGTAAGTGAAATATTTGGT GAGATATATTTGACAGAAGATTCAATTAAAGAAATTTTAAAAAATAAATTTGAAAAGGCA ACAAAAACTAAAGAAAAGAAAACAACTGGATTAAATATTGAACAATTTGGTTCAAATTTA AACGAAAAAGTTAGAAGTGGTAAATTACAAGGAATATATGGAAGAGATGAAGAAATAAGA GCAATTATTGAATCATTATTAAGATATAATAAAAATAGTCCAGTATTAGTTGGTCAACCT GGTACTGGTAAAACTACTATTGTTGAGGGTCTTGCATATAGAATTGAAAAAGGTGATGTT CCTAAAGAATTATTAGGATATACAATTATAAGTTTAAATTTTCGTAAATTCACAGCTGGA ACATCATATAGAGGAGAATTTGAAAATAGAATGAAAAATATAATTAAAGAATTAAAAAAT AAAAAGAATAAGATAATATTATTTGTTGATGAAATTCATTTATTATTAGGTGCTGGTAAA GCCGAAGGTGGTGTAGATGCAGCAAATTTATTAAAACCAGTTTTATCAAAAGGTGAAATA AAATTAATCGGTGCAACAACTGTTACTGAATATAGAAAATATATTGAAAGTTGCTCAGCT TTTGAAAGAAGATTTGAAAAAGTTATTGTTGAACCTCCATCTGTTGAAACAGCAATCAAA ATTTTAAGATCATTAAAAAGTAAATATGAAAAATTTTATGGTATAAACATTACTGATAAA GCTTTAGTTGCTGCTGTAAAAGTTTCTGATAAATTTATAAAAGATAGATTTTTACCAGAT AAAGCTATTGATTTATTAAATAAAGCATGTTCCTTTTTACAAGTTCAATTATCGGGAAAA CCAAGAGTCATCGATTTAACTGAAAGATATATAGAAAGATTAGCATATGAAATAAGTACT TTAGAAAGAGATGTTGATAAAGTTTCCAAAAAAAAATATAGTTCTTTAGTTGAAGAATTT GAATTAAAAAAAGAAGAATTAAAAAAATATTATGAAGAATATGTTACAACAGGAGAAAGA TTAAAAAGAAAAAAAGAAGTTGAAAAAAAATTAAATGAATTAAAAGATATAGCACAAAAT TATATTAATGCAGGTCAAGAACCTCCTACTGAATTACAAGAAAGCTTAAATGAAGCTCAA AAACAATTTGTAGAAATATATAAAAATACTGTAGCATATGTTGAAGAAAAAACACATAAT GCTATGAATGTAGATTCACTTTATCAAGAACATGTATCATATATTTATTTAAGAGATTCT GGTATGCCTTTGGGTTCATTATCATTTGAATCATCAAAAGGTGCATTAAAATTATATAAT AGTTTATCACAATCAATTATAGGTAATGAAGATATTATTAAATCTTTAAGTGATGCTGTA GTTAAAGCTGCAACTGGTATGAAAGATCCAGAAAAGCCTATTGGTACTTTTCTATTTTTG GGACCTACTGGTGTTGGTAAAACAGAATTAGCCAAAACATTAGCTATTGAATTATTTAAT TCAAAAAATAATTTAATTCGTGTTAATATGTCAGAATTTACAGAAGCACATTCAGTATCT AAAATTACTGGTAGTCCACCAGGTTATGTTGGTTTTAGTGATTCTGGTCAGTTAACAGAA GCTGTTAGAGAAAGACCTCATTCTGTTGTTTTATTTGATGAATTAGAAAAAGCACATCCA GATGTATTTAAAGTTTTATTACAAATTTTAGGTGATGGTTATATTAATGATAATCATAGA AGAAATATCGATTTTTCAAATACTATTATTATTATGACATCTAACTTAGGTGCTGATTTA TTTAAAAAACAATTTTTCTTTGATGCTGATAATTCAAACACACAAGAATATAAAAGATTA TTTGAAGATCTTAGAATCCAATTAATTAAAAAATGTAAAAAAGTTTTCAAACCTGAATTT GTTAACAGAATTGATAAAATCGGTATTTTCGAACCATTAAGCAAAAAAAATCTACATAAA ATTGTTAAATTACGATTTAAAAAATTAGAAAAACGTTTAGAAGAAAAAAATATTAGCATT GATGTCTCAGATAGAGCTATAGATTATATTATTGATCAATCATATGATCCAGAATTAGGA GCTAGACCCACACTTATATTTATTGAAAGTGTTATCATGACCAAATTTGCTGTTATGTAT CTAGAAAAAGAATTAATTGATGATATGGATGTATATGTTGATTACAACAAAACAATCAAT AACATTGTTATTAACCTTTCATTATCATAA
  • Download Fasta
  • Fasta :-

    MVQNIVKNYLFVIVLLLSVLKVDITVFASNNNNNNIQENFLNRTINTLNSGRNIAKRYGH NQLKPVHILKSIIKSEYGLNLFKSNNIDLGNLKEYTDAALEQTRAGAPLDNKTIVINSEA TNEVLAEAKAIAKKYKSPKVDIEHILYGLMSDELVSEIFGEIYLTEDSIKEILKNKFEKA TKTKEKKTTGLNIEQFGSNLNEKVRSGKLQGIYGRDEEIRAIIESLLRYNKNSPVLVGQP GTGKTTIVEGLAYRIEKGDVPKELLGYTIISLNFRKFTAGTSYRGEFENRMKNIIKELKN KKNKIILFVDEIHLLLGAGKAEGGVDAANLLKPVLSKGEIKLIGATTVTEYRKYIESCSA FERRFEKVIVEPPSVETAIKILRSLKSKYEKFYGINITDKALVAAVKVSDKFIKDRFLPD KAIDLLNKACSFLQVQLSGKPRVIDLTERYIERLAYEISTLERDVDKVSKKKYSSLVEEF ELKKEELKKYYEEYVTTGERLKRKKEVEKKLNELKDIAQNYINAGQEPPTELQESLNEAQ KQFVEIYKNTVAYVEEKTHNAMNVDSLYQEHVSYIYLRDSGMPLGSLSFESSKGALKLYN SLSQSIIGNEDIIKSLSDAVVKAATGMKDPEKPIGTFLFLGPTGVGKTELAKTLAIELFN SKNNLIRVNMSEFTEAHSVSKITGSPPGYVGFSDSGQLTEAVRERPHSVVLFDELEKAHP DVFKVLLQILGDGYINDNHRRNIDFSNTIIIMTSNLGADLFKKQFFFDADNSNTQEYKRL FEDLRIQLIKKCKKVFKPEFVNRIDKIGIFEPLSKKNLHKIVKLRFKKLEKRLEEKNISI DVSDRAIDYIIDQSYDPELGARPTLIFIESVIMTKFAVMYLEKELIDDMDVYVDYNKTIN NIVINLSLS

  • title: ATP binding site
  • coordinates: Q239,P240,G241,T242,G243,K244,T245,T246,D310,T347
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_0933200708 SERPHSVVLF0.994unspPY17X_0933200708 SERPHSVVLF0.994unspPY17X_0933200708 SERPHSVVLF0.994unspPY17X_0933200137 SKKYKSPKVD0.997unspPY17X_0933200475 SKKYSSLVEE0.995unsp
PY17X_0933200


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India