PY17X_0934000 | rhoptry neck protein 4

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0020008      GO:1990225      

  • Curated_GO_Components:  rhoptry      rhoptry neck      

  • Curated_GO_Function_IDs:  GO:0005515      

  • Curated_GO_Functions:  protein binding      

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >PY17X_0934000 MSGLRLFYACIFIVLSTFVHTAKSFQDNDDIWGFSFVNKDGKVEEDSNQNVHHAGNATNT EHGQQNAVNISEHHPNNTEELKSHEEHGEGQSEQVSQQINNENEGNNNNNNNTDNIPEHN PSNQTNNSDVQESNHNDMTHQNVTTENVNNTENVQPEHVNNTEHVQPEHVNNTEHVQHEN INNTEHVQPEHVNNTEHVQPEHVNNTEHVQPEHVNNTEHVQHENINNTEHVQPEHVNNTE HVQPEYVNNTEHVQPEYVNNTEHVQPENVNNTEHIQHENGHSGEEEGEHSAEGDQININN NNKDYSDVYSHSSSSSDSNQFSDTTSSSSDINQFSDTTSSSSDRSQFSDTTSSSSSGYSN LRKPVFGNGSRPVFGNPSAPVFGNPSAPVFGNPSAPVFGNNYGGHKGSSSTNFSFKDAPQ GFSNMLYNYGQNLKNHINENHSDIMDKGMNSITDPHNYNLLKNKYVYLSLAERAIFEIMD VSKKGLSEISSMRNRENISKIYHSALKRLKMNVHSLGPRLELISLETCDKILSEMFKILT ELSYDNYSQFYESMNINKSALSESFKEIKIKILKKIGVSYAKFPPIIKETNGNQCPVSDL IISITPRELSQRLAIMFSGWLSADEYGSIDDFENNVELNVLCSGASILMQQWKYYQNALG FEDNNDHAFLGLIDELLTIDKKYSKNEEHSKSLEKMKKSKVFNYCTKLMRTSGNISTIPF NHENNKTPSSSIVGSLGNLVKAHMSGYYAATAQRINSYFNYSDNKDKKKTLSKVISVCTL LNLTDILFNCTDPQSTNAANLNLLKLNVLNTKGKEILYRLYNLSYLLESENEAIKEVCNP KNAAVDKSLQKLLELVSSSSHNVLTHEIEKRALGTDYINEEIKNINDFDHNEKDKGEDDV EKAIFDDL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_0934000.fa Sequence name : PY17X_0934000 Sequence length : 908 VALUES OF COMPUTED PARAMETERS Coef20 : 4.697 CoefTot : 0.205 ChDiff : -54 ZoneTo : 26 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.918 1.988 0.319 0.701 MesoH : -0.367 0.167 -0.408 0.192 MuHd_075 : 16.755 9.624 2.340 3.434 MuHd_095 : 25.322 21.773 8.151 6.869 MuHd_100 : 21.717 16.110 6.977 5.685 MuHd_105 : 21.723 16.758 6.472 5.850 Hmax_075 : 16.300 15.867 3.344 6.780 Hmax_095 : 20.100 24.100 5.218 7.595 Hmax_100 : 19.900 19.200 4.536 7.580 Hmax_105 : 21.700 22.700 3.863 6.210 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7384 0.2616 DFMC : 0.7747 0.2253
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 908 PY17X_0934000 MSGLRLFYACIFIVLSTFVHTAKSFQDNDDIWGFSFVNKDGKVEEDSNQNVHHAGNATNTEHGQQNAVNISEHHPNNTEE 80 LKSHEEHGEGQSEQVSQQINNENEGNNNNNNNTDNIPEHNPSNQTNNSDVQESNHNDMTHQNVTTENVNNTENVQPEHVN 160 NTEHVQPEHVNNTEHVQHENINNTEHVQPEHVNNTEHVQPEHVNNTEHVQPEHVNNTEHVQHENINNTEHVQPEHVNNTE 240 HVQPEYVNNTEHVQPEYVNNTEHVQPENVNNTEHIQHENGHSGEEEGEHSAEGDQININNNNKDYSDVYSHSSSSSDSNQ 320 FSDTTSSSSDINQFSDTTSSSSDRSQFSDTTSSSSSGYSNLRKPVFGNGSRPVFGNPSAPVFGNPSAPVFGNPSAPVFGN 400 NYGGHKGSSSTNFSFKDAPQGFSNMLYNYGQNLKNHINENHSDIMDKGMNSITDPHNYNLLKNKYVYLSLAERAIFEIMD 480 VSKKGLSEISSMRNRENISKIYHSALKRLKMNVHSLGPRLELISLETCDKILSEMFKILTELSYDNYSQFYESMNINKSA 560 LSESFKEIKIKILKKIGVSYAKFPPIIKETNGNQCPVSDLIISITPRELSQRLAIMFSGWLSADEYGSIDDFENNVELNV 640 LCSGASILMQQWKYYQNALGFEDNNDHAFLGLIDELLTIDKKYSKNEEHSKSLEKMKKSKVFNYCTKLMRTSGNISTIPF 720 NHENNKTPSSSIVGSLGNLVKAHMSGYYAATAQRINSYFNYSDNKDKKKTLSKVISVCTLLNLTDILFNCTDPQSTNAAN 800 LNLLKLNVLNTKGKEILYRLYNLSYLLESENEAIKEVCNPKNAAVDKSLQKLLELVSSSSHNVLTHEIEKRALGTDYINE 880 EIKNINDFDHNEKDKGEDDVEKAIFDDL 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ............................ 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_0934000 5 --MSGLR|LF 0.076 . PY17X_0934000 23 TFVHTAK|SF 0.092 . PY17X_0934000 39 GFSFVNK|DG 0.099 . PY17X_0934000 42 FVNKDGK|VE 0.066 . PY17X_0934000 82 NNTEELK|SH 0.082 . PY17X_0934000 303 NINNNNK|DY 0.092 . PY17X_0934000 344 TSSSSDR|SQ 0.169 . PY17X_0934000 362 SGYSNLR|KP 0.073 . PY17X_0934000 363 GYSNLRK|PV 0.140 . PY17X_0934000 371 VFGNGSR|PV 0.100 . PY17X_0934000 406 NNYGGHK|GS 0.066 . PY17X_0934000 416 STNFSFK|DA 0.139 . PY17X_0934000 434 NYGQNLK|NH 0.056 . PY17X_0934000 447 HSDIMDK|GM 0.069 . PY17X_0934000 462 HNYNLLK|NK 0.065 . PY17X_0934000 464 YNLLKNK|YV 0.083 . PY17X_0934000 473 YLSLAER|AI 0.120 . PY17X_0934000 483 EIMDVSK|KG 0.061 . PY17X_0934000 484 IMDVSKK|GL 0.118 . PY17X_0934000 493 SEISSMR|NR 0.081 . PY17X_0934000 495 ISSMRNR|EN 0.114 . PY17X_0934000 500 NRENISK|IY 0.070 . PY17X_0934000 507 IYHSALK|RL 0.059 . PY17X_0934000 508 YHSALKR|LK 0.160 . PY17X_0934000 510 SALKRLK|MN 0.062 . PY17X_0934000 519 VHSLGPR|LE 0.081 . PY17X_0934000 530 SLETCDK|IL 0.068 . PY17X_0934000 537 ILSEMFK|IL 0.068 . PY17X_0934000 558 ESMNINK|SA 0.077 . PY17X_0934000 566 ALSESFK|EI 0.076 . PY17X_0934000 569 ESFKEIK|IK 0.060 . PY17X_0934000 571 FKEIKIK|IL 0.085 . PY17X_0934000 574 IKIKILK|KI 0.069 . PY17X_0934000 575 KIKILKK|IG 0.078 . PY17X_0934000 582 IGVSYAK|FP 0.065 . PY17X_0934000 588 KFPPIIK|ET 0.056 . PY17X_0934000 607 IISITPR|EL 0.141 . PY17X_0934000 612 PRELSQR|LA 0.095 . PY17X_0934000 653 ILMQQWK|YY 0.086 . PY17X_0934000 681 ELLTIDK|KY 0.065 . PY17X_0934000 682 LLTIDKK|YS 0.103 . PY17X_0934000 685 IDKKYSK|NE 0.061 . PY17X_0934000 691 KNEEHSK|SL 0.105 . PY17X_0934000 695 HSKSLEK|MK 0.062 . PY17X_0934000 697 KSLEKMK|KS 0.065 . PY17X_0934000 698 SLEKMKK|SK 0.140 . PY17X_0934000 700 EKMKKSK|VF 0.069 . PY17X_0934000 707 VFNYCTK|LM 0.068 . PY17X_0934000 710 YCTKLMR|TS 0.088 . PY17X_0934000 726 FNHENNK|TP 0.068 . PY17X_0934000 741 SLGNLVK|AH 0.065 . PY17X_0934000 754 YAATAQR|IN 0.081 . PY17X_0934000 765 FNYSDNK|DK 0.065 . PY17X_0934000 767 YSDNKDK|KK 0.060 . PY17X_0934000 768 SDNKDKK|KT 0.116 . PY17X_0934000 769 DNKDKKK|TL 0.152 . PY17X_0934000 773 KKKTLSK|VI 0.064 . PY17X_0934000 805 ANLNLLK|LN 0.053 . PY17X_0934000 812 LNVLNTK|GK 0.065 . PY17X_0934000 814 VLNTKGK|EI 0.068 . PY17X_0934000 819 GKEILYR|LY 0.085 . PY17X_0934000 835 SENEAIK|EV 0.069 . PY17X_0934000 841 KEVCNPK|NA 0.063 . PY17X_0934000 847 KNAAVDK|SL 0.115 . PY17X_0934000 851 VDKSLQK|LL 0.060 . PY17X_0934000 870 LTHEIEK|RA 0.056 . PY17X_0934000 871 THEIEKR|AL 0.230 . PY17X_0934000 883 YINEEIK|NI 0.072 . PY17X_0934000 893 DFDHNEK|DK 0.066 . PY17X_0934000 895 DHNEKDK|GE 0.094 . PY17X_0934000 902 GEDDVEK|AI 0.075 . ____________________________^_________________

  • Fasta :-

    >PY17X_0934000 ATGTCTGGCCTAAGGTTATTTTATGCATGCATTTTCATAGTGCTCTCTACATTTGTTCAT ACCGCAAAATCATTCCAAGATAATGATGATATTTGGGGATTTTCCTTTGTTAACAAAGAT GGAAAAGTAGAAGAGGATTCTAATCAAAATGTGCATCACGCTGGTAATGCTACCAATACA GAACATGGACAACAAAATGCAGTAAATATTTCTGAACATCATCCAAATAATACTGAAGAA TTAAAAAGCCATGAAGAACATGGTGAAGGTCAATCTGAACAGGTTTCTCAACAAATAAAT AACGAAAACGAGGGTAACAATAACAATAATAATAATACTGACAATATTCCAGAACATAAT CCTTCGAACCAAACCAATAATTCAGATGTTCAAGAATCAAATCATAATGATATGACCCAT CAAAATGTTACAACTGAAAATGTAAACAATACTGAGAATGTACAACCTGAACATGTAAAT AATACCGAACATGTACAACCTGAACATGTAAATAATACCGAACATGTACAACATGAAAAT ATAAACAATACTGAACATGTACAACCTGAACATGTAAATAATACCGAACATGTACAACCT GAACATGTAAATAATACCGAACATGTACAACCTGAACATGTAAATAATACCGAACATGTA CAACATGAAAATATAAACAATACTGAACATGTACAACCTGAACATGTAAATAATACCGAA CATGTACAACCTGAATATGTAAATAATACCGAACATGTACAACCTGAATATGTAAATAAT ACTGAACATGTACAACCTGAAAATGTAAACAATACTGAACATATACAACATGAAAATGGG CATAGTGGTGAAGAAGAGGGTGAGCACAGTGCAGAAGGGGACCAAATCAACATAAACAAT AATAATAAGGATTACAGTGATGTATATTCACACAGCAGTTCTAGTTCAGATAGCAATCAA TTTAGCGATACGACAAGCTCAAGTTCAGATATCAATCAATTTAGCGATACGACAAGTTCA AGTTCAGATAGAAGTCAATTTAGCGATACGACAAGTTCATCTAGTTCAGGATATTCGAAT TTAAGAAAACCTGTTTTTGGAAATGGTTCTAGACCCGTTTTTGGAAATCCATCTGCACCC GTTTTTGGAAATCCATCTGCACCTGTTTTTGGAAATCCATCTGCACCCGTTTTTGGAAAT AATTATGGAGGTCATAAAGGATCGTCTAGTACAAATTTTTCATTTAAAGACGCTCCACAA GGTTTCTCAAATATGTTATATAATTATGGGCAAAATCTTAAAAATCATATAAATGAAAAT CATAGTGATATTATGGATAAAGGAATGAATAGCATTACCGATCCTCATAATTATAACTTA TTAAAAAACAAATATGTATATTTATCATTAGCAGAAAGAGCAATATTCGAAATTATGGAT GTTTCTAAAAAAGGATTGAGTGAAATTAGTAGTATGCGAAATCGTGAAAATATTTCTAAA ATATATCATAGTGCTTTAAAAAGATTAAAAATGAATGTCCATTCTCTTGGTCCAAGATTA GAGTTGATTTCACTTGAAACATGTGATAAAATATTATCAGAAATGTTTAAAATATTAACT GAATTGTCTTATGATAATTATTCACAATTTTATGAATCTATGAATATTAATAAATCAGCA TTAAGTGAATCATTTAAAGAAATAAAAATCAAAATATTAAAAAAAATAGGTGTTTCATAT GCAAAATTCCCACCAATTATTAAAGAGACAAACGGAAATCAATGTCCAGTTAGTGATTTG ATTATAAGTATAACACCCAGAGAATTATCGCAACGACTTGCTATTATGTTTAGCGGTTGG TTATCTGCTGATGAATACGGTTCTATAGATGATTTTGAAAATAATGTCGAACTAAATGTT TTATGCTCAGGTGCATCCATATTAATGCAACAATGGAAATATTATCAAAATGCTTTAGGG TTTGAAGATAATAATGATCATGCATTTTTAGGTTTAATCGATGAATTATTAACAATAGAC AAAAAATATAGTAAAAATGAAGAACATAGTAAATCTTTAGAAAAAATGAAAAAATCAAAA GTATTTAATTATTGTACTAAACTTATGAGAACAAGTGGAAACATTTCAACAATACCATTT AATCATGAAAACAATAAAACTCCAAGTTCATCCATTGTTGGTTCATTAGGAAATTTAGTT AAGGCACATATGAGTGGATATTATGCAGCTACTGCTCAAAGAATTAACTCTTATTTCAAT TATTCTGACAATAAAGATAAAAAGAAAACACTATCTAAAGTCATATCAGTTTGTACTCTC TTAAATTTAACAGATATTTTATTTAATTGCACAGATCCACAATCAACTAATGCCGCAAAT TTGAACCTTTTGAAACTAAATGTATTAAATACTAAAGGAAAAGAAATTCTATATCGTCTT TATAATCTAAGTTACTTATTAGAGAGCGAAAACGAAGCAATTAAAGAAGTGTGTAATCCT AAAAATGCCGCAGTTGATAAATCATTGCAAAAATTGTTAGAATTAGTTTCGTCAAGCTCA CACAACGTATTAACACATGAAATAGAAAAGAGGGCTCTTGGTACTGATTATATTAACGAG GAAATAAAAAATATAAATGATTTTGATCATAATGAAAAAGACAAAGGAGAAGATGATGTT GAGAAAGCCATTTTTGATGATTTATGA
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  • Fasta :-

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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_0934000329 STSSSSDINQ0.995unspPY17X_0934000329 STSSSSDINQ0.995unspPY17X_0934000329 STSSSSDINQ0.995unspPY17X_0934000342 STSSSSDRSQ0.997unspPY17X_0934000356 SSSSSSGYSN0.994unspPY17X_0934000414 SSTNFSFKDA0.997unspPY17X_0934000564 SALSESFKEI0.995unspPY17X_093400083 SEELKSHEEH0.998unspPY17X_0934000314 SSHSSSSSDS0.992unsp
PY17X_0934000


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India